Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30132 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 1.5e-112 409.5 198 100.0
SEGI_30900 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 4.5e-56 221.9 103 99.0
Thecc.01G250400 Theobroma cacao HOM05D007042 ORTHO05D008441 3.7e-42 175.6 169 49.7
PGR031G2106 Punica granatum HOM05D007042 ORTHO05D008441 1.1e-41 174.1 156 53.8
Dinv43069 Davidia involucrata HOM05D007042 ORTHO05D008441 1.4e-41 173.7 180 48.9
Dinv16402 Davidia involucrata HOM05D007042 ORTHO05D008441 1.8e-41 173.3 163 50.9
GSVIVG01028431001 Vitis vinifera HOM05D007042 ORTHO05D008441 4.1e-41 172.2 168 49.4
Duzib133G0775 Durio zibethinus HOM05D007042 ORTHO05D008441 5.3e-41 171.8 173 48.6
Gorai.001G181700 Gossypium raimondii HOM05D007042 ORTHO05D008441 1.5e-40 170.2 188 46.3
Nn1g02976 Nelumbo nucifera HOM05D007042 ORTHO05D008441 1.5e-40 170.2 190 45.3
Gohir.A07G152300 Gossypium hirsutum HOM05D007042 ORTHO05D008441 2.0e-40 169.9 188 46.3
TWI18G1052 Tripterygium wilfordii HOM05D007042 ORTHO05D008441 2.0e-40 169.9 167 46.1
VMungo1383G0900 Vigna mungo HOM05D007042 ORTHO05D008441 2.0e-40 169.9 177 45.8
Ciclev10022455m.g Citrus clementina HOM05D007042 ORTHO05D008441 5.9e-40 168.3 173 46.2
Sed0010391 Sechium edule HOM05D007042 ORTHO05D008441 5.9e-40 168.3 154 52.6
TAR633G0993 Trochodendron aralioides HOM05D007042 ORTHO05D008441 7.7e-40 167.9 193 45.1
Potri.002G256700 Populus trichocarpa HOM05D007042 ORTHO05D008441 1.0e-39 167.5 168 48.2
Manes.12G044501 Manihot esculenta HOM05D007042 ORTHO05D008441 1.3e-39 167.2 171 48.0
Eucgr.H04779 Eucalyptus grandis HOM05D007042 ORTHO05D008441 1.7e-39 166.8 160 50.0
Gohir.D07G158500 Gossypium hirsutum HOM05D007042 ORTHO05D008441 2.2e-39 166.4 188 45.2
Lj1g0019034 Lotus japonicus HOM05D007042 ORTHO05D008441 6.5e-39 164.9 166 47.6
Cpa.g.sc87.28 Carica papaya HOM05D007042 ORTHO05D008441 8.5e-39 164.5 161 46.0
CDE06G0115 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 1.1e-38 164.1 164 44.5
Psat3g054000 Pisum sativum HOM05D007042 ORTHO05D008441 1.9e-38 163.3 165 47.3
Prupe.8G215500 Prunus persica HOM05D007042 ORTHO05D008441 1.9e-38 163.3 159 49.1
Aqoxy5G00144 Aquilegia oxysepala HOM05D007042 ORTHO05D008441 3.2e-38 162.5 173 45.7
Phvul.001G164800 Phaseolus vulgaris HOM05D007042 ORTHO05D008441 3.2e-38 162.5 153 49.0
Cc02_g07760 Coffea canephora HOM05D007042 ORTHO05D008441 5.5e-38 161.8 196 46.4
Actinidia09516 Actinidia chinensis HOM05D007042 ORTHO05D008441 7.2e-38 161.4 168 47.0
CSS0015019 Camellia sinensis var. sinensis HOM05D007042 ORTHO05D008441 7.2e-38 161.4 171 46.8
MELO3C022392.2 Cucumis melo HOM05D007042 ORTHO05D008441 7.2e-38 161.4 167 46.1
Hma1.2p1_2139F.1_g314960 Hydrangea macrophylla HOM05D007042 ORTHO05D008441 9.4e-38 161.0 157 48.4
ATR0787G115 Amborella trichopoda HOM05D007042 ORTHO05D008441 1.2e-37 160.6 175 48.6
Lalb_Chr20g0113621 Lupinus albus HOM05D007042 ORTHO05D008441 1.6e-37 160.2 188 41.5
arahy.Tifrunner.gnm1.ann1.UI445S Arachis hypogaea HOM05D007042 ORTHO05D008441 2.1e-37 159.8 156 51.3
Medtr7g098470 Medicago truncatula HOM05D007042 ORTHO05D008441 2.1e-37 159.8 159 48.4
Migut.F00782 Erythranthe guttata HOM05D007042 ORTHO05D008441 2.7e-37 159.5 147 51.0
arahy.Tifrunner.gnm1.ann1.T4WIMW Arachis hypogaea HOM05D007042 ORTHO05D008441 3.6e-37 159.1 156 50.6
CsaV3_6G007350 Cucumis sativus L. HOM05D007042 ORTHO05D008441 3.6e-37 159.1 171 45.0
SHI26738 Sapria himalayana HOM05D007042 ORTHO05D008441 4.7e-37 158.7 192 39.1
THA.LOC104814528 Tarenaya hassleriana HOM05D007042 ORTHO05D008441 7.9e-37 157.9 171 45.6
Ca_08743_v3 Cicer arietinum L. HOM05D007042 ORTHO05D008441 1.0e-36 157.5 149 48.3
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 1.0e-36 157.5 136 53.7
Rhsim01G0260600 Rhododendron simsii HOM05D007042 ORTHO05D008441 1.8e-36 156.8 164 42.7
SalBow3G0444 Salvia bowleyana HOM05D007042 ORTHO05D008441 1.8e-36 156.8 160 45.6
CAN.G786.8 Capsicum annuum HOM05D007042 ORTHO05D008441 3.9e-36 155.6 157 47.8
Glyma.19G168400 Glycine max HOM05D007042 ORTHO05D008441 3.9e-36 155.6 187 41.7
Lsat_1_v5_gn_9_11480 Lactuca sativa HOM05D007042 ORTHO05D008441 3.9e-36 155.6 162 46.9
ClCG06G001410 Citrullus lanatus HOM05D007042 ORTHO05D008441 5.1e-36 155.2 173 45.7
ECA247G0849 Erigeron canadensis HOM05D007042 ORTHO05D008441 5.1e-36 155.2 165 44.2
Atru.chr5.1857 Acer truncatum HOM05D007042 ORTHO05D008441 6.7e-36 154.8 160 46.2
Haze_24706 Corylus avellana HOM05D007042 ORTHO05D008441 6.7e-36 154.8 186 44.1
HanXRQChr15g0468211 Helianthus annuus HOM05D007042 ORTHO05D008441 8.8e-36 154.5 168 45.2
Nitab4.5_0013552g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 8.8e-36 154.5 147 50.3
Solyc04g011530.3 Solanum lycopersicum HOM05D007042 ORTHO05D008441 8.8e-36 154.5 172 44.8
HPP92_014817 Vanilla planifolia HOM05D007042 ORTHO05D008441 8.8e-36 154.5 170 45.3
CiPaw.03G270900 Carya illinoinensis HOM05D007042 ORTHO05D008441 1.1e-35 154.1 152 48.0
MD05G1188900 Malus domestica HOM05D007042 ORTHO05D008441 1.1e-35 154.1 173 45.7
Nitab4.5_0010166g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 1.1e-35 154.1 132 53.8
Sopen04g005710 Solanum pennellii HOM05D007042 ORTHO05D008441 1.1e-35 154.1 172 44.8
Cfa002484 Carpinus fangiana HOM05D007042 ORTHO05D008441 1.5e-35 153.7 162 46.3
Carub.0003s3477 Capsella rubella HOM05D007042 ORTHO05D008441 2.0e-35 153.3 173 45.1
Glyma.03G167300 Glycine max HOM05D007042 ORTHO05D008441 2.6e-35 152.9 154 46.8
MD10G1176500 Malus domestica HOM05D007042 ORTHO05D008441 2.6e-35 152.9 149 48.3
Sc17g0002810 Simmondsia chinensis HOM05D007042 ORTHO05D008441 2.6e-35 152.9 173 44.5
Peaxi162Scf00760g00324 Petunia axillaris HOM05D007042 ORTHO05D008441 3.3e-35 152.5 144 49.3
PGSC0003DMG400027743 Solanum tuberosum HOM05D007042 ORTHO05D008441 3.3e-35 152.5 150 48.7
BcaB03g16831 Brassica carinata HOM05D007042 ORTHO05D008441 4.4e-35 152.1 161 46.6
vmacro14796 Vaccinium macrocarpon HOM05D007042 ORTHO05D008441 5.7e-35 151.8 162 43.2
Aa31LG8G17370 Aethionema arabicum HOM05D007042 ORTHO05D008441 9.7e-35 151.0 137 51.8
FAN15G2210 Fragaria x ananassa HOM05D007042 ORTHO05D008441 1.7e-34 150.2 134 50.0
FAN27G0500 Fragaria x ananassa HOM05D007042 ORTHO05D008441 1.7e-34 150.2 134 50.0
Sp3g33630 Schrenkiella parvula HOM05D007042 ORTHO05D008441 1.7e-34 150.2 137 51.8
BcaC06g36726 Brassica carinata HOM05D007042 ORTHO05D008441 2.2e-34 149.8 157 45.9
C07p00700 Brassica napus HOM05D007042 ORTHO05D008441 2.2e-34 149.8 157 45.9
BolC7t40512H Brassica oleracea HOM05D007042 ORTHO05D008441 2.2e-34 149.8 157 45.9
Lj1A74G98 Lonicera japonica HOM05D007042 ORTHO05D008441 2.8e-34 149.4 147 47.6
AL3G53360 Arabidopsis lyrata HOM05D007042 ORTHO05D008441 3.7e-34 149.1 157 46.5
RcHm_v2.0_Chr6g0286631 Rosa chinensis HOM05D007042 ORTHO05D008441 3.7e-34 149.1 177 43.5
FAN24G0975 Fragaria x ananassa HOM05D003075 ORTHO05D003430 4.8e-34 148.7 134 49.3
A07p00340 Brassica napus HOM05D007042 ORTHO05D008441 6.3e-34 148.3 157 45.9
Thhalv10002102m.g Eutrema salsugineum HOM05D007042 ORTHO05D008441 6.3e-34 148.3 137 50.4
Hund05486 Selenicereus undatus HOM05D000914 ORTHO05D000718 6.3e-34 148.3 148 45.3
AT2G20390 Arabidopsis thaliana HOM05D007042 ORTHO05D008441 8.2e-34 147.9 137 50.4
FvH4_2g20510 Fragaria vesca HOM05D007042 ORTHO05D008441 8.2e-34 147.9 177 43.5
PSO063G2627 Papaver somniferum HOM05D007042 ORTHO05D008441 1.1e-33 147.5 148 48.0
BraA07t27825Z Brassica rapa HOM05D007042 ORTHO05D008441 1.4e-33 147.1 137 49.6
CARHR110910 Cardamine hirsuta HOM05D007042 ORTHO05D008441 1.4e-33 147.1 134 50.7
CiPaw.04G190700 Carya illinoinensis HOM05D007042 ORTHO05D008441 1.8e-33 146.7 153 47.7
PSO170G0149 Papaver somniferum HOM05D007042 ORTHO05D008441 1.6e-32 143.7 180 42.8
AUR62025440 Chenopodium quinoa HOM05D007042 ORTHO05D008441 2.6e-32 142.9 170 39.4
Actinidia27524 Actinidia chinensis HOM05D007042 ORTHO05D008441 1.3e-31 140.6 132 50.8
AUR62008799 Chenopodium quinoa HOM05D007042 ORTHO05D008441 2.9e-31 139.4 160 40.6
EL10Ac7g17687 Beta vulgaris HOM05D007042 ORTHO05D008441 1.9e-30 136.7 170 37.6
SGA_v2.0_scaffold94G28473 Striga asiatica HOM05D007042 ORTHO05D008441 2.5e-30 136.3 147 44.9
Zm00001eb088930 Zea mays HOM05D007042 ORTHO05D008441 9.4e-30 134.4 158 38.0
Sabra02G0195200 Salix brachista HOM05D007042 ORTHO05D008441 1.0e-28 131.0 110 55.5
TPR.G20062 Trifolium pratense HOM05D007042 ORTHO05D008441 1.8e-28 130.2 131 48.1
COL.COLO4_03573 Corchorus olitorius HOM05D007042 ORTHO05D008441 7.5e-27 124.8 102 54.9
FAN27G0749 Fragaria x ananassa HOM05D003075 ORTHO05D003430 2.8e-26 122.9 94 58.5
Zm00001eb307520 Zea mays HOM05D007042 ORTHO05D008441 6.3e-26 121.7 146 41.8
QL09p041460 Quercus lobata HOM05D007042 ORTHO05D008441 1.8e-25 120.2 123 44.7
Os02g0754800 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 1.2e-24 117.5 112 45.5
CDE04G2760 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 4.5e-24 115.5 89 53.9
AagrBONN_evm.TU.Sc2ySwM_228.1144 Anthoceros agrestis HOM05D007042 ORTHO05D008441 1.3e-23 114.0 148 41.9
Actinidia23697 Actinidia chinensis HOM05D007042 ORTHO05D008441 3.8e-23 112.5 151 41.1
Os04g0129600 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 5.5e-22 108.6 117 40.2
SHI06358 Sapria himalayana HOM05D007042 ORTHO05D008441 2.3e-20 103.2 116 40.5
Mapoly0078s0039 Marchantia polymorpha HOM05D007042 ORTHO05D008441 1.2e-19 100.9 169 38.5
Pp3c18_10950 Physcomitrium patens HOM05D007042 ORTHO05D008441 2.6e-19 99.8 140 40.7
SMO116G0088 Selaginella moellendorffii HOM05D001526 ORTHO05D008441 2.4e-17 93.2 132 39.4
MCO16G209 Micromonas commoda HOM05D007042 ORTHO05D008441 1.6e-08 63.9 197 24.9
TPR.G20307 Trifolium pratense HOM05D007042 ORTHO05D008441 1.1e-06 57.8 73 39.7


User provided reference genes

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