Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30124 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 1.2e-194 682.9 345 100.0
SEGI_18556 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 2.4e-49 200.3 151 70.9
SEGI_09561 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 4.6e-48 196.1 147 66.7
SEGI_26202 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 3.0e-47 193.4 151 66.2
SEGI_23151 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 1.6e-45 187.6 147 65.3
SEGI_05109 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 2.8e-45 186.8 150 63.3
SEGI_05398 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 6.2e-45 185.7 150 64.0
SEGI_32664 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 4.9e-42 176.0 151 60.9
SEGI_27121 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 1.9e-41 174.1 151 60.3
SEGI_21976 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 2.3e-39 167.2 141 61.7
SEGI_33068 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 6.6e-39 165.6 133 60.2
SEGI_33293 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 2.4e-36 157.1 129 65.1
SEGI_35967 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 4.2e-33 146.4 109 67.0
SEGI_25734 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 1.3e-31 141.4 150 52.7
SEGI_02081 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 8.7e-31 138.7 106 64.2
SEGI_07087 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 8.7e-31 138.7 106 64.2
SEGI_17154 Sequoiadendron giganteum HOM05D008476 ORTHO05D000152 4.3e-30 136.3 156 43.6
SEGI_24840 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 5.8e-27 125.9 147 48.3
SEGI_26100 Sequoiadendron giganteum HOM05D008476 ORTHO05D000152 2.2e-26 124.0 163 40.5
SEGI_06541 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 8.4e-26 122.1 141 48.2
SEGI_03405 Sequoiadendron giganteum HOM05D008476 ORTHO05D000002 1.9e-25 120.9 166 44.0
SEGI_05497 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 3.5e-24 116.7 166 42.2
SEGI_31229 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 6.7e-23 112.5 163 39.9
SEGI_14682 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 5.6e-22 109.4 122 46.7
SEGI_07000 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 7.4e-22 109.0 164 37.8
SEGI_24879 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 3.7e-21 106.7 163 39.3
SEGI_39207 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 3.7e-21 106.7 163 39.3
SEGI_08642 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 1.1e-20 105.1 163 39.3
SEGI_08121 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 2.4e-20 104.0 168 38.1
SEGI_36883 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 1.5e-19 101.3 168 36.9
SEGI_21384 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 1.0e-15 88.6 118 41.5
SEGI_22902 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 6.7e-15 85.9 109 48.6
SEGI_35098 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 6.3e-13 79.3 118 36.4
Ciclev10006407m.g Citrus clementina HOM05D000264 ORTHO05D000152 3.4e-11 73.6 138 34.8
Dinv06866 Davidia involucrata HOM05D000264 ORTHO05D000152 4.5e-11 73.2 138 32.6
SEGI_35553 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 4.5e-11 73.2 172 30.2
Zm00001eb323050 Zea mays HOM05D000264 ORTHO05D000152 1.0e-10 72.0 167 27.5
QL10p052455 Quercus lobata HOM05D000264 ORTHO05D000152 2.2e-10 70.9 128 35.2
BcaC01g04362 Brassica carinata HOM05D000264 ORTHO05D000152 3.8e-10 70.1 138 29.7
SEGI_32025 Sequoiadendron giganteum HOM05D000693 ORTHO05D001102 3.8e-10 70.1 58 55.2
CsaV3_2G016990 Cucumis sativus L. HOM05D000448 ORTHO05D000291 5.0e-10 69.7 140 30.7
C03p40960 Brassica napus HOM05D000264 ORTHO05D000152 6.5e-10 69.3 138 29.7
C03p41010 Brassica napus HOM05D000264 ORTHO05D000152 8.5e-10 68.9 138 29.0
BolC3t16390H Brassica oleracea HOM05D000264 ORTHO05D000152 8.5e-10 68.9 138 29.0
Rhsim04G0193100 Rhododendron simsii HOM05D000264 ORTHO05D000152 8.5e-10 68.9 136 33.1
Actinidia04482 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.1e-09 68.6 136 30.1
Actinidia08293 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.1e-09 68.6 136 30.1
BraA03t12545Z Brassica rapa HOM05D000264 ORTHO05D000152 1.1e-09 68.6 138 30.4
SEGI_09570 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 1.1e-09 68.6 70 45.7
Cfa006697 Carpinus fangiana HOM05D000264 ORTHO05D000152 1.4e-09 68.2 135 31.1
Cc00_g18250 Coffea canephora HOM05D000264 ORTHO05D000152 1.4e-09 68.2 147 34.0
Cc00_g24640 Coffea canephora HOM05D000264 ORTHO05D000152 1.9e-09 67.8 147 33.3
MELO3C013066.2 Cucumis melo HOM05D000448 ORTHO05D000291 1.9e-09 67.8 137 29.9
A03p33710 Brassica napus HOM05D000264 ORTHO05D000152 2.5e-09 67.4 138 29.7
BolC3t16381H Brassica oleracea HOM05D000264 ORTHO05D000152 2.5e-09 67.4 138 28.3
Rhsim04G0192200 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.5e-09 67.4 153 31.4
DCAR_029609 Daucus carota HOM05D000264 ORTHO05D000152 3.2e-09 67.0 102 34.3
SEGI_14126 Sequoiadendron giganteum HOM05D000170 ORTHO05D000159 3.2e-09 67.0 139 37.4
Duzib151G0098 Durio zibethinus HOM05D000264 ORTHO05D000152 4.2e-09 66.6 134 32.8
FvH4_1g10430 Fragaria vesca HOM05D000264 ORTHO05D000152 4.2e-09 66.6 99 37.4
Prupe.4G144900 Prunus persica HOM05D000264 ORTHO05D000152 4.2e-09 66.6 142 28.9
Atru.chr4.2245 Acer truncatum HOM05D000264 ORTHO05D000152 5.5e-09 66.2 150 29.3
Actinidia04481 Actinidia chinensis HOM05D000264 ORTHO05D000152 5.5e-09 66.2 148 29.7
Cc11_g07820 Coffea canephora HOM05D000264 ORTHO05D000152 5.5e-09 66.2 138 32.6
Cc11_g07200 Coffea canephora HOM05D000264 ORTHO05D000152 7.2e-09 65.9 155 29.0
Dinv14025 Davidia involucrata HOM05D000001 ORTHO05D000003 9.3e-09 65.5 138 31.9
Duzib151G0771 Durio zibethinus HOM05D000264 ORTHO05D000152 9.3e-09 65.5 134 33.6
Atru.chr4.2256 Acer truncatum HOM05D000264 ORTHO05D000152 1.2e-08 65.1 136 30.9
Aqoxy4G01065 Aquilegia oxysepala HOM05D000264 ORTHO05D000152 1.2e-08 65.1 172 28.5
CSS0045785 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.2e-08 65.1 136 33.1
Duzib035G0001 Durio zibethinus HOM05D000264 ORTHO05D000152 1.2e-08 65.1 141 31.2
BcaB04g19313 Brassica carinata HOM05D000264 ORTHO05D000152 1.6e-08 64.7 138 29.0
BcaC09g49234 Brassica carinata HOM05D000264 ORTHO05D000152 1.6e-08 64.7 142 28.2
Prupe.7G182300 Prunus persica HOM05D000264 ORTHO05D000152 1.6e-08 64.7 140 34.3
Dinv14027 Davidia involucrata HOM05D000264 ORTHO05D000152 2.1e-08 64.3 135 30.4
GSVIVG01001645001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.1e-08 64.3 139 31.7
AL3G14640 Arabidopsis lyrata HOM05D000264 ORTHO05D000152 6.1e-08 62.8 144 26.4
AUR62044581 Chenopodium quinoa HOM05D000480 ORTHO05D000313 6.1e-08 62.8 139 28.8
AUR62044582 Chenopodium quinoa HOM05D000480 ORTHO05D000313 6.1e-08 62.8 139 28.8
SEGI_29126 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 6.1e-08 62.8 111 35.1
vmacro08446 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 6.1e-08 62.8 140 28.6
GSVIVG01013591001 Vitis vinifera HOM05D000264 ORTHO05D000152 6.1e-08 62.8 170 27.6
Solyc07g061750.4 Solanum lycopersicum HOM05D000264 ORTHO05D000152 7.9e-08 62.4 132 31.1
TAR636G1934 Trochodendron aralioides HOM05D000264 ORTHO05D000152 7.9e-08 62.4 303 25.7
Actinidia04484 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.0e-07 62.0 238 29.4
CiPaw.12G052000 Carya illinoinensis HOM05D000264 ORTHO05D000152 1.0e-07 62.0 93 37.6
Haze_27596 Corylus avellana HOM05D000264 ORTHO05D000152 1.0e-07 62.0 143 29.4
Atru.chr4.2248 Acer truncatum HOM05D000264 ORTHO05D000152 1.4e-07 61.6 142 29.6
Dinv40706 Davidia involucrata HOM05D000264 ORTHO05D000152 1.4e-07 61.6 138 30.4
Eucgr.D01232 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.3e-07 60.8 135 25.2
Lj1C726T14 Lonicera japonica HOM05D000264 ORTHO05D000152 2.3e-07 60.8 131 32.8
Lj3A491T20 Lonicera japonica HOM05D000264 ORTHO05D000152 2.3e-07 60.8 149 32.9
SEGI_27543 Sequoiadendron giganteum HOM05D000264 ORTHO05D000152 2.3e-07 60.8 117 35.0
CANSAT78G0315 Cannabis sativa HOM05D000264 ORTHO05D000152 3.0e-07 60.5 99 33.3
Dinv01341 Davidia involucrata HOM05D000264 ORTHO05D000152 3.0e-07 60.5 141 30.5
Dinv02176 Davidia involucrata HOM05D000264 ORTHO05D000152 3.0e-07 60.5 138 29.7
Lj3C490G4 Lonicera japonica HOM05D000264 ORTHO05D000152 3.0e-07 60.5 132 34.8
Peaxi162Scf00071g00016 Petunia axillaris HOM05D000264 ORTHO05D000152 3.0e-07 60.5 85 37.6
Potri.019G106000 Populus trichocarpa HOM05D000264 ORTHO05D000152 3.0e-07 60.5 96 33.3
Prupe.4G145100 Prunus persica HOM05D000264 ORTHO05D000152 3.0e-07 60.5 225 24.9
SEGI_37629 Sequoiadendron giganteum HOM05D000264 ORTHO05D000152 3.0e-07 60.5 104 38.5
vmacro04094 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 3.0e-07 60.5 148 30.4
GSVIVG01001649001 Vitis vinifera HOM05D000264 ORTHO05D000152 3.0e-07 60.5 144 32.6
Actinidia11041 Actinidia chinensis HOM05D000264 ORTHO05D000152 3.9e-07 60.1 166 29.5
AUR62031578 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.9e-07 60.1 146 30.1
Dinv14026 Davidia involucrata HOM05D000264 ORTHO05D000152 3.9e-07 60.1 149 29.5
Lj3C489G7 Lonicera japonica HOM05D000264 ORTHO05D000152 3.9e-07 60.1 132 34.8
Nitab4.5_0002409g0010 Nicotiana tabacum HOM05D000264 ORTHO05D000152 3.9e-07 60.1 95 32.6
Potri.019G108200 Populus trichocarpa HOM05D000264 ORTHO05D000152 3.9e-07 60.1 96 34.4
AUR62043844 Chenopodium quinoa HOM05D000448 ORTHO05D000291 5.1e-07 59.7 234 25.2
Dinv14030 Davidia involucrata HOM05D000264 ORTHO05D000152 5.1e-07 59.7 140 30.0
Duzib151G0583 Durio zibethinus HOM05D000264 ORTHO05D000152 5.1e-07 59.7 133 30.8
Os07g0532500 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 5.1e-07 59.7 144 30.6
Aqoxy4G02568 Aquilegia oxysepala HOM05D000264 ORTHO05D000152 6.7e-07 59.3 106 34.0
Lj3A465G34 Lonicera japonica HOM05D000264 ORTHO05D000152 6.7e-07 59.3 143 31.5
Oeu032598.1 Olea europaea HOM05D000264 ORTHO05D000152 6.7e-07 59.3 200 27.0
Aqoxy4G01190 Aquilegia oxysepala HOM05D000264 ORTHO05D000152 8.8e-07 58.9 123 34.1
CANSAT54G1172 Cannabis sativa HOM05D000264 ORTHO05D000152 8.8e-07 58.9 124 29.8
MD03G1094000 Malus domestica HOM05D000264 ORTHO05D000152 8.8e-07 58.9 137 31.4
SEGI_11045 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 8.8e-07 58.9 111 32.4
Sc12g0002980 Simmondsia chinensis HOM05D000264 ORTHO05D000152 8.8e-07 58.9 86 36.0
BcaC03g14743 Brassica carinata HOM05D000264 ORTHO05D000152 1.1e-06 58.5 122 32.0
AUR62043848 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.1e-06 58.5 169 26.0
Duzib151G0639 Durio zibethinus HOM05D000264 ORTHO05D000152 1.1e-06 58.5 133 30.8
Eucgr.D01529 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.1e-06 58.5 146 24.0
Lj3A493G26 Lonicera japonica HOM05D000264 ORTHO05D000152 1.1e-06 58.5 144 33.3
Lj3C494G1 Lonicera japonica HOM05D000264 ORTHO05D000152 1.1e-06 58.5 144 33.3
Oeu032595.1 Olea europaea HOM05D000264 ORTHO05D000152 1.1e-06 58.5 139 28.8
Potri.019G108801 Populus trichocarpa HOM05D000264 ORTHO05D000152 1.1e-06 58.5 96 33.3
Ah.16g104880 Amaranthus hybridus HOM05D000264 ORTHO05D000152 1.5e-06 58.2 137 30.7
Lj3C493G8 Lonicera japonica HOM05D000264 ORTHO05D000152 1.5e-06 58.2 144 33.3
GSVIVG01013586001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.5e-06 58.2 171 28.1
AUR62009254 Chenopodium quinoa HOM05D000480 ORTHO05D000313 1.9e-06 57.8 146 26.7
Dinv34537 Davidia involucrata HOM05D016153 ORTHO05D013372 1.9e-06 57.8 161 27.3
Lj3A489T26 Lonicera japonica HOM05D000264 ORTHO05D000152 1.9e-06 57.8 144 33.3
MBI02_g18415_MAGBIO Magnolia biondii HOM05D000264 ORTHO05D000152 1.9e-06 57.8 139 28.1
Eucgr.F00992 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.5e-06 57.4 139 30.9
MD03G1094600 Malus domestica HOM05D000264 ORTHO05D000152 2.5e-06 57.4 173 26.6
SEGI_31005 Sequoiadendron giganteum HOM05D008476 ORTHO05D010878 2.5e-06 57.4 69 46.4
BolC2t08325H Brassica oleracea HOM05D000264 ORTHO05D000152 3.3e-06 57.0 122 31.1
CSS0002232 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 3.3e-06 57.0 154 28.6
AUR62043845 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.3e-06 57.0 140 28.6
Lj3A793T36 Lonicera japonica HOM05D000264 ORTHO05D000152 3.3e-06 57.0 132 32.6
SEGI_08030 Sequoiadendron giganteum HOM05D000264 ORTHO05D000152 3.3e-06 57.0 137 32.1
CiPaw.01G049800 Carya illinoinensis HOM05D000264 ORTHO05D000152 4.3e-06 56.6 93 35.5
AUR62041307 Chenopodium quinoa HOM05D000264 ORTHO05D000152 4.3e-06 56.6 141 27.0
Lj3P491T16 Lonicera japonica HOM05D000264 ORTHO05D000152 4.3e-06 56.6 123 35.8
Peaxi162Scf00044g00114 Petunia axillaris HOM05D000264 ORTHO05D000152 4.3e-06 56.6 89 36.0
Eucgr.L02507 Eucalyptus grandis HOM05D000264 ORTHO05D000152 5.7e-06 56.2 141 29.1
Gorai.012G177500 Gossypium raimondii HOM05D000264 ORTHO05D000152 5.7e-06 56.2 94 35.1
Potri.019G107000 Populus trichocarpa HOM05D000264 ORTHO05D000152 5.7e-06 56.2 95 30.5
Potri.019G107700 Populus trichocarpa HOM05D000264 ORTHO05D000152 5.7e-06 56.2 132 30.3
Potri.019G108000 Populus trichocarpa HOM05D000264 ORTHO05D000152 5.7e-06 56.2 134 29.1
SEGI_15403 Sequoiadendron giganteum HOM05D000006 ORTHO05D000001 5.7e-06 56.2 132 30.3
Gohir.D04G184200 Gossypium hirsutum HOM05D000264 ORTHO05D000152 7.4e-06 55.8 94 34.0
Os07g0492966 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 7.4e-06 55.8 149 28.9
Thecc.04G245500 Theobroma cacao HOM05D000264 ORTHO05D000152 7.4e-06 55.8 107 32.7
GSVIVG01010730001 Vitis vinifera HOM05D000264 ORTHO05D000152 7.4e-06 55.8 140 32.1
AT1G03670 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 9.7e-06 55.5 122 32.8
AUR62009255 Chenopodium quinoa HOM05D000448 ORTHO05D000291 9.7e-06 55.5 229 24.5
Dinv44626 Davidia involucrata HOM05D000264 ORTHO05D000152 9.7e-06 55.5 138 31.9
Eucgr.D01270 Eucalyptus grandis HOM05D000264 ORTHO05D000152 9.7e-06 55.5 123 26.8
Eucgr.H03472 Eucalyptus grandis HOM05D000264 ORTHO05D000152 9.7e-06 55.5 141 29.8
Lj3A465G35 Lonicera japonica HOM05D000264 ORTHO05D000152 9.7e-06 55.5 132 33.3
Lj3A466T17 Lonicera japonica HOM05D000264 ORTHO05D000152 9.7e-06 55.5 144 32.6
SEGI_38724 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 9.7e-06 55.5 125 32.0


User provided reference genes

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