Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30090 Sequoiadendron giganteum HOM05D003973 ORTHO05D004679 0.0e+00 1840.5 936 100.0
Nn4g22928 Nelumbo nucifera HOM05D003973 ORTHO05D004679 6.7e-251 871.3 855 55.7
MBI17_g07970_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 5.6e-250 868.2 841 55.8
TAR633G0700 Trochodendron aralioides HOM05D003973 ORTHO05D004679 2.8e-249 865.9 805 56.6
Hma1.2p1_0621F.1_g190820 Hydrangea macrophylla HOM05D003973 ORTHO05D004679 3.7e-249 865.5 815 56.6
Manes.12G031400 Manihot esculenta HOM05D003973 ORTHO05D004679 6.2e-249 864.8 834 55.9
TAR362G0234 Trochodendron aralioides HOM05D003973 ORTHO05D004679 1.7e-246 856.7 813 56.2
Ciclev10018809m.g Citrus clementina HOM05D003973 ORTHO05D004679 9.3e-245 850.9 823 55.8
CANSAT01G0525 Cannabis sativa HOM05D003973 ORTHO05D004679 1.3e-243 847.0 845 54.4
CiPaw.03G262600 Carya illinoinensis HOM05D003973 ORTHO05D004679 5.1e-243 845.1 811 56.0
Dinv34610 Davidia involucrata HOM05D003973 ORTHO05D004679 6.7e-243 844.7 826 54.6
Actinidia12891 Actinidia chinensis HOM05D003973 ORTHO05D004679 1.1e-242 844.0 812 55.4
TWI75G1776 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 1.5e-242 843.6 811 55.0
CSS0019197 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 1.9e-242 843.2 819 55.1
Cc11_g02590 Coffea canephora HOM05D003973 ORTHO05D004679 7.4e-242 841.3 815 54.8
VMungo1383G0117 Vigna mungo HOM05D003973 ORTHO05D004679 9.6e-242 840.9 851 53.5
Atru.chr5.1648 Acer truncatum HOM05D003973 ORTHO05D004679 1.3e-241 840.5 839 53.9
Thecc.01G260300 Theobroma cacao HOM05D003973 ORTHO05D004679 1.6e-241 840.1 832 54.6
TWI12G0927 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 2.1e-241 839.7 819 55.2
Glyma.03G162100 Glycine max HOM05D003973 ORTHO05D004679 3.7e-241 839.0 866 53.1
Aqoxy1G00848 Aquilegia oxysepala HOM05D003973 ORTHO05D004679 6.2e-241 838.2 795 55.8
arahy.Tifrunner.gnm1.ann1.M1CRL2 Arachis hypogaea HOM05D003973 ORTHO05D004679 8.2e-241 837.8 849 53.8
Ca_09689_v3 Cicer arietinum L. HOM05D003973 ORTHO05D004679 6.9e-240 834.7 813 54.5
Potri.002G039900 Populus trichocarpa HOM05D003973 ORTHO05D004679 1.2e-239 833.9 801 54.8
Glyma.10G035800 Glycine max HOM05D003973 ORTHO05D004679 3.4e-239 832.4 853 53.1
Peaxi162Scf00329g00811 Petunia axillaris HOM05D003973 ORTHO05D004679 5.8e-239 831.6 818 54.6
Gorai.004G072800 Gossypium raimondii HOM05D003973 ORTHO05D004679 7.6e-239 831.2 879 52.0
GSVIVG01028304001 Vitis vinifera HOM05D003973 ORTHO05D004679 7.6e-239 831.2 811 54.1
Potri.005G222800 Populus trichocarpa HOM05D003973 ORTHO05D004679 1.0e-238 830.9 815 55.1
Cpa.g.sc50.33 Carica papaya HOM05D003973 ORTHO05D004679 1.3e-238 830.5 856 54.1
Lsat_1_v5_gn_9_8721 Lactuca sativa HOM05D003973 ORTHO05D004679 1.3e-238 830.5 798 56.1
ATR0680G230 Amborella trichopoda HOM05D003973 ORTHO05D004679 2.2e-238 829.7 817 53.9
TWI18G0068 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 2.9e-238 829.3 836 54.7
COL.COLO4_05173 Corchorus olitorius HOM05D003973 ORTHO05D004679 3.8e-238 828.9 841 54.1
PGR044G1639 Punica granatum HOM05D003973 ORTHO05D004679 4.9e-238 828.6 826 54.5
Gorai.007G145200 Gossypium raimondii HOM05D003973 ORTHO05D004679 6.5e-238 828.2 811 54.4
Sabra02G0032000 Salix brachista HOM05D003973 ORTHO05D004679 1.1e-237 827.4 794 55.2
Psat3g058480 Pisum sativum HOM05D003973 ORTHO05D004679 1.9e-237 826.6 810 54.8
Sabra05G0171500 Salix brachista HOM05D003973 ORTHO05D004679 4.2e-237 825.5 799 54.6
Phvul.001G159900 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 7.1e-237 824.7 854 53.2
ECA247G3763 Erigeron canadensis HOM05D003973 ORTHO05D004679 9.3e-237 824.3 819 54.8
Gohir.D11G135600 Gossypium hirsutum HOM05D003973 ORTHO05D004679 9.3e-237 824.3 811 54.1
Glyma.13G122200 Glycine max HOM05D003973 ORTHO05D004679 1.6e-236 823.5 858 53.3
Nitab4.5_0000129g0340 Nicotiana tabacum HOM05D003973 ORTHO05D004679 1.6e-236 823.5 819 54.0
Haze_24609 Corylus avellana HOM05D003973 ORTHO05D004679 4.6e-236 822.0 895 51.5
Nitab4.5_0001419g0010 Nicotiana tabacum HOM05D003973 ORTHO05D004679 4.6e-236 822.0 816 54.3
Solyc04g008630.3 Solanum lycopersicum HOM05D003973 ORTHO05D004679 4.6e-236 822.0 817 53.9
Sopen04g003790 Solanum pennellii HOM05D003973 ORTHO05D004679 4.6e-236 822.0 817 54.3
Lalb_Chr02g0152311 Lupinus albus HOM05D003973 ORTHO05D004679 7.9e-236 821.2 849 53.0
MD10G1185900 Malus domestica HOM05D003973 ORTHO05D004679 1.0e-235 820.8 794 55.2
Glyma.19G163500 Glycine max HOM05D003973 ORTHO05D004679 1.3e-235 820.5 867 52.4
Lj1g0003934 Lotus japonicus HOM05D003973 ORTHO05D004679 1.8e-235 820.1 874 52.2
arahy.Tifrunner.gnm1.ann1.0L9E2L Arachis hypogaea HOM05D003973 ORTHO05D004679 2.3e-235 819.7 872 52.4
Medtr1g070160 Medicago truncatula HOM05D003973 ORTHO05D004679 2.3e-235 819.7 846 53.2
PGSC0003DMG400031378 Solanum tuberosum HOM05D003973 ORTHO05D004679 2.3e-235 819.7 817 54.1
MD05G1199600 Malus domestica HOM05D003973 ORTHO05D004679 3.9e-235 818.9 794 55.3
Gohir.A11G129900 Gossypium hirsutum HOM05D003973 ORTHO05D004679 5.1e-235 818.5 811 53.5
ATR0559G363 Amborella trichopoda HOM05D003973 ORTHO05D004679 1.5e-234 817.0 814 54.8
FAN20G1573 Fragaria x ananassa HOM05D003973 ORTHO05D004679 1.5e-234 817.0 796 54.0
RcHm_v2.0_Chr6g0288391 Rosa chinensis HOM05D003973 ORTHO05D004679 1.9e-234 816.6 798 54.1
FvH4_2g21710 Fragaria vesca HOM05D003973 ORTHO05D004679 4.3e-234 815.5 792 53.8
Lj5g0017930 Lotus japonicus HOM05D003973 ORTHO05D004679 9.7e-234 814.3 839 52.7
HanXRQChr10g0281061 Helianthus annuus HOM05D003973 ORTHO05D004679 1.3e-233 813.9 835 53.9
HanXRQChr15g0467921 Helianthus annuus HOM05D003973 ORTHO05D004679 1.6e-233 813.5 790 54.9
DCAR_000939 Daucus carota HOM05D003973 ORTHO05D004679 2.1e-233 813.1 809 53.4
Oeu026512.1 Olea europaea HOM05D003973 ORTHO05D004679 2.8e-233 812.8 825 52.7
arahy.Tifrunner.gnm1.ann1.B4WKJK Arachis hypogaea HOM05D003973 ORTHO05D004679 3.7e-233 812.4 793 54.5
MSTRG.18316 Avicennia marina HOM05D003973 ORTHO05D004679 4.8e-233 812.0 818 53.7
PSO782G1372 Papaver somniferum HOM05D003973 ORTHO05D004679 1.4e-232 810.4 856 52.2
Eucgr.B01536 Eucalyptus grandis HOM05D003973 ORTHO05D004679 1.8e-232 810.1 841 53.5
Lalb_Chr06g0170381 Lupinus albus HOM05D003973 ORTHO05D004679 3.1e-232 809.3 850 52.6
CAN.G194.11 Capsicum annuum HOM05D003973 ORTHO05D004679 5.3e-232 808.5 817 53.7
arahy.Tifrunner.gnm1.ann1.61T5XF Arachis hypogaea HOM05D003973 ORTHO05D004679 2.0e-231 806.6 793 54.4
A04p24090 Brassica napus HOM05D003973 ORTHO05D004679 2.6e-231 806.2 824 52.9
PSO063G1318 Papaver somniferum HOM05D003973 ORTHO05D004679 2.6e-231 806.2 858 52.0
C04p60770 Brassica napus HOM05D003973 ORTHO05D004679 3.4e-231 805.8 823 53.0
QL09p038243 Quercus lobata HOM05D003973 ORTHO05D004679 3.4e-231 805.8 816 53.6
TPR.G16308 Trifolium pratense HOM05D003973 ORTHO05D004679 4.5e-231 805.4 812 53.4
TPR.G3551 Trifolium pratense HOM05D003973 ORTHO05D004679 4.5e-231 805.4 813 53.3
FAN27G0583 Fragaria x ananassa HOM05D003973 ORTHO05D004679 5.9e-231 805.1 798 53.5
BolC4t27568H Brassica oleracea HOM05D003973 ORTHO05D004679 7.6e-231 804.7 839 52.4
FAN24G2194 Fragaria x ananassa HOM05D003973 ORTHO05D004679 1.3e-230 803.9 820 52.8
BraA04t17928Z Brassica rapa HOM05D003973 ORTHO05D004679 1.7e-230 803.5 824 53.2
Sp4g13740 Schrenkiella parvula HOM05D003973 ORTHO05D004679 2.2e-230 803.1 817 53.4
Medtr7g096680 Medicago truncatula HOM05D003973 ORTHO05D004679 5.0e-230 802.0 897 49.7
BcaB06g28436 Brassica carinata HOM05D003973 ORTHO05D004679 6.5e-230 801.6 841 52.1
BcaB06g28520 Brassica carinata HOM05D003973 ORTHO05D004679 6.5e-230 801.6 839 52.3
DCAR_005697 Daucus carota HOM05D003973 ORTHO05D004679 1.1e-229 800.8 808 53.8
Migut.D00414 Erythranthe guttata HOM05D003973 ORTHO05D004679 1.9e-229 800.0 819 53.4
ClCG07G000970 Citrullus lanatus HOM05D003973 ORTHO05D004679 1.6e-228 797.0 837 52.0
FAN15G1892 Fragaria x ananassa HOM05D003973 ORTHO05D004679 4.6e-228 795.4 822 52.1
THA.LOC104800875 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 4.6e-228 795.4 824 52.4
MELO3C012904.2 Cucumis melo HOM05D003973 ORTHO05D004679 1.8e-227 793.5 806 52.5
Thhalv10016226m.g Eutrema salsugineum HOM05D003973 ORTHO05D004679 2.3e-227 793.1 822 52.7
CsaV3_3G022520 Cucumis sativus L. HOM05D003973 ORTHO05D004679 2.5e-226 789.6 837 51.4
CARHR124850 Cardamine hirsuta HOM05D003973 ORTHO05D004679 5.7e-226 788.5 824 53.0
BcaB02g10369 Brassica carinata HOM05D003973 ORTHO05D004679 2.8e-225 786.2 836 51.7
Dinv22416 Davidia involucrata HOM05D003973 ORTHO05D004679 2.8e-225 786.2 854 52.0
Sed0025131 Sechium edule HOM05D003973 ORTHO05D004679 6.3e-225 785.0 849 51.4
Duzib138G0375 Durio zibethinus HOM05D003973 ORTHO05D004679 8.2e-225 784.6 813 52.8
THA.LOC104826212 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 1.1e-224 784.3 819 51.2
Gohir.D08G207800 Gossypium hirsutum HOM05D003973 ORTHO05D004679 2.4e-224 783.1 813 53.4
AT2G31260 Arabidopsis thaliana HOM05D003973 ORTHO05D004679 3.1e-224 782.7 844 50.9
SalBow4G2825 Salvia bowleyana HOM05D003973 ORTHO05D004679 4.1e-224 782.3 878 49.8
Sed0015853 Sechium edule HOM05D003973 ORTHO05D004679 2.0e-223 780.0 846 51.3
AL4G26480 Arabidopsis lyrata HOM05D003973 ORTHO05D004679 2.6e-223 779.6 837 51.6
Carub.0004s1253 Capsella rubella HOM05D003973 ORTHO05D004679 2.6e-223 779.6 844 50.6
Mapoly0002s0148 Marchantia polymorpha HOM05D003973 ORTHO05D004679 2.6e-223 779.6 815 50.7
Gorai.004G220200 Gossypium raimondii HOM05D003973 ORTHO05D004679 4.5e-223 778.9 703 58.2
Duzib133G1136 Durio zibethinus HOM05D003973 ORTHO05D004679 1.3e-222 777.3 814 52.7
Nn3g17035 Nelumbo nucifera HOM05D003973 ORTHO05D004679 2.2e-222 776.5 604 63.1
Rhsim13G0034000 Rhododendron simsii HOM05D003973 ORTHO05D004679 3.8e-222 775.8 822 51.8
Aa31LG5G5690 Aethionema arabicum HOM05D003973 ORTHO05D004679 5.5e-221 771.9 788 52.5
Oeu039681.1 Olea europaea HOM05D003973 ORTHO05D004679 5.5e-221 771.9 648 59.4
Prupe.8G225400 Prunus persica HOM05D003973 ORTHO05D004679 2.3e-219 766.5 794 52.9
Ah.11g049650 Amaranthus hybridus HOM05D003973 ORTHO05D004679 2.6e-218 763.1 843 50.1
EL10Ac5g10415 Beta vulgaris HOM05D003973 ORTHO05D004679 3.1e-216 756.1 863 49.1
HanXRQChr08g0217761 Helianthus annuus HOM05D003973 ORTHO05D004679 3.4e-215 752.7 819 50.8
Lj1A65T50 Lonicera japonica HOM05D003973 ORTHO05D004679 1.1e-213 747.7 859 49.8
Lj2A1153G48 Lonicera japonica HOM05D003973 ORTHO05D004679 3.2e-213 746.1 810 50.9
Gohir.A08G060000 Gossypium hirsutum HOM05D003973 ORTHO05D004679 7.9e-212 741.5 852 49.2
Phvul.007G194300 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 1.1e-210 737.6 810 49.1
Duzib211G0218 Durio zibethinus HOM05D003973 ORTHO05D004679 1.7e-209 733.8 833 50.3
Sc17g0000740 Simmondsia chinensis HOM05D003973 ORTHO05D004679 1.4e-208 730.7 585 61.5
SMO239G0162 Selaginella moellendorffii HOM05D003973 ORTHO05D004679 2.4e-208 729.9 574 63.8
Pp3c10_9800 Physcomitrium patens HOM05D003973 ORTHO05D004679 4.5e-207 725.7 835 46.9
Psat6g055320 Pisum sativum HOM05D003973 ORTHO05D004679 1.0e-206 724.5 876 48.5
Gohir.D08G069200 Gossypium hirsutum HOM05D003973 ORTHO05D004679 3.8e-206 722.6 860 48.6
Os03g0248000 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 1.8e-200 703.7 853 46.1
SGA_v2.0_scaffold138G35249 Striga asiatica HOM05D003973 ORTHO05D004679 3.1e-200 703.0 805 48.0
HPP92_008425 Vanilla planifolia HOM05D003973 ORTHO05D004679 5.3e-200 702.2 797 48.9
unitig_0.g154 Utricularia gibba HOM05D003973 ORTHO05D004679 1.2e-199 701.0 815 48.2
Gohir.A08G189300 Gossypium hirsutum HOM05D003973 ORTHO05D004679 2.5e-197 693.3 812 49.8
Oeu058816.4 Olea europaea HOM05D003973 ORTHO05D004679 6.8e-195 685.3 904 44.5
Os10g0163100 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 8.8e-195 684.9 811 47.0
Pp3c2_1820 Physcomitrium patens HOM05D003973 ORTHO05D004679 1.2e-194 684.5 867 44.6
Zm00001eb010620 Zea mays HOM05D003973 ORTHO05D004679 4.8e-193 679.1 837 46.1
CBR_g24398 Chara braunii HOM05D003973 ORTHO05D004679 1.3e-190 671.0 629 52.9
HPP92_008421 Vanilla planifolia HOM05D003973 ORTHO05D004679 3.6e-188 662.9 632 54.4
Hund09596 Selenicereus undatus HOM05D003973 ORTHO05D004679 5.7e-186 655.6 828 46.6
AUR62024730 Chenopodium quinoa HOM05D003973 ORTHO05D004679 5.4e-184 649.0 805 46.8
vmacro02653 Vaccinium macrocarpon HOM05D003973 ORTHO05D004679 1.0e-182 644.8 764 48.0
ECA236G2624 Erigeron canadensis HOM05D003973 ORTHO05D004679 2.9e-182 643.3 828 45.9
AUR62011889 Chenopodium quinoa HOM05D003973 ORTHO05D004679 3.8e-182 642.9 802 46.3
SHI09836 Sapria himalayana HOM05D003973 ORTHO05D004679 4.3e-181 639.4 849 44.4
Ah.02g111890 Amaranthus hybridus HOM05D003973 ORTHO05D004679 5.8e-162 575.9 818 42.3
CiPaw.04G185700 Carya illinoinensis HOM05D003973 ORTHO05D004679 4.8e-140 503.1 532 52.3
BraA05t20372Z Brassica rapa HOM05D003973 ORTHO05D004679 5.8e-138 496.1 626 46.2
AagrBONN_evm.TU.Sc2ySwM_117.1675 Anthoceros agrestis HOM05D003973 ORTHO05D004679 8.4e-137 492.3 567 46.4
A05p14440 Brassica napus HOM05D003973 ORTHO05D004679 6.0e-135 486.1 626 44.9
VMungo0720G0690 Vigna mungo HOM05D003973 ORTHO05D004679 8.7e-134 482.3 562 47.2
unitig_60.g25752 Utricularia gibba HOM05D003973 ORTHO05D004679 3.3e-117 427.2 783 36.7
MCO05G121 Micromonas commoda HOM05D003973 ORTHO05D004679 1.2e-114 418.7 587 39.4
MBI18_g15332_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 6.5e-105 386.3 446 49.3
Cre09.g391500 Chlamydomonas reinhardtii HOM05D003973 ORTHO05D004679 6.7e-94 349.7 698 32.7
AUR62024729 Chenopodium quinoa HOM05D003973 ORTHO05D004679 2.7e-87 327.8 435 46.0
CDE02G3928 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 2.0e-85 321.6 486 39.9
CDE06G1379 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 2.8e-84 317.8 433 45.3
BcaB06g28438 Brassica carinata HOM05D003973 ORTHO05D004679 1.5e-80 305.4 402 43.3
CDE06G1301 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 2.7e-74 284.6 207 66.2
BolC4t23456H Brassica oleracea HOM05D003973 ORTHO05D004679 7.0e-67 260.0 267 52.1
Cfa025050 Carpinus fangiana HOM05D003973 ORTHO05D004679 7.8e-58 229.9 518 28.6
PRCOL_00006952 Prasinoderma coloniale HOM05D003973 ORTHO05D004679 8.6e-57 226.5 504 30.0
BcaC02g11207 Brassica carinata HOM05D003973 ORTHO05D004679 2.3e-54 218.4 165 62.4
C04p19230 Brassica napus HOM05D003973 ORTHO05D004679 2.4e-51 208.4 267 45.3
Hund02908 Selenicereus undatus HOM05D003973 ORTHO05D004679 1.0e-49 203.0 155 61.3
Psat2g015440 Pisum sativum HOM05D003973 ORTHO05D004679 1.1e-27 129.8 180 41.1
AagrBONN_evm.TU.Sc2ySwM_344.134 Anthoceros agrestis HOM05D003973 ORTHO05D004679 3.4e-21 108.2 73 65.8
BcaB06g28437 Brassica carinata HOM05D003973 ORTHO05D004679 3.9e-17 94.7 63 66.7
CSS0024912 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 1.6e-15 89.4 74 59.5
Hund02909 Selenicereus undatus HOM05D003973 ORTHO05D004679 1.3e-09 69.7 123 35.0
Sc17g0000730 Simmondsia chinensis HOM05D003973 ORTHO05D004679 5.1e-09 67.8 212 31.6
ATR1132G061 Amborella trichopoda HOM05D003973 ORTHO05D062324 1.8e-06 59.3 78 46.2
VMungo0251G0786 Vigna mungo HOM05D003973 ORTHO05D432747 1.8e-06 59.3 74 41.9


User provided reference genes

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