Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30050 Sequoiadendron giganteum HOM05D003637 ORTHO05D004175 1.7e-102 375.9 181 100.0
SEGI_09615 Sequoiadendron giganteum HOM05D003637 ORTHO05D004175 1.5e-45 186.8 95 98.9
Ah.05g170380 Amaranthus hybridus HOM05D003637 ORTHO05D004175 2.6e-34 149.4 98 76.5
AUR62013381 Chenopodium quinoa HOM05D003637 ORTHO05D004175 3.7e-33 145.6 98 73.5
AUR62038534 Chenopodium quinoa HOM05D003637 ORTHO05D004175 3.7e-33 145.6 98 73.5
Hund26943 Selenicereus undatus HOM05D003637 ORTHO05D004175 1.4e-32 143.7 98 71.4
EL10Ac1g01273 Beta vulgaris HOM05D003637 ORTHO05D004175 5.4e-32 141.7 98 71.4
Sc25g0003100 Simmondsia chinensis HOM05D003637 ORTHO05D004175 5.4e-32 141.7 98 69.4
PGR042G1411 Punica granatum HOM05D003637 ORTHO05D004175 2.7e-31 139.4 94 70.2
CSS0048399 Camellia sinensis var. sinensis HOM05D003637 ORTHO05D004175 4.6e-31 138.7 98 68.4
Haze_13959 Corylus avellana HOM05D003637 ORTHO05D004175 7.8e-31 137.9 98 69.4
TAR628G0957 Trochodendron aralioides HOM05D003637 ORTHO05D004175 1.0e-30 137.5 98 67.3
vmacro18731 Vaccinium macrocarpon HOM05D003637 ORTHO05D004175 1.0e-30 137.5 94 69.1
Cfa008076 Carpinus fangiana HOM05D003637 ORTHO05D004175 1.7e-30 136.7 98 67.3
Aqoxy1G03903 Aquilegia oxysepala HOM05D003637 ORTHO05D004175 3.0e-30 136.0 98 68.4
Cfa004677 Carpinus fangiana HOM05D003637 ORTHO05D004175 3.9e-30 135.6 98 66.3
PGR083G1739 Punica granatum HOM05D003637 ORTHO05D004175 3.9e-30 135.6 94 68.1
CDE10G0032 Ceratophyllum demersum HOM05D003637 ORTHO05D004175 5.0e-30 135.2 98 70.4
DCAR_014239 Daucus carota HOM05D003637 ORTHO05D004175 1.1e-29 134.0 94 69.1
arahy.Tifrunner.gnm1.ann1.ICJU69 Arachis hypogaea HOM05D003637 ORTHO05D004175 1.5e-29 133.7 94 70.2
TPR.G8734 Trifolium pratense HOM05D003637 ORTHO05D004175 1.5e-29 133.7 94 71.3
QL09p050166 Quercus lobata HOM05D003637 ORTHO05D004175 1.9e-29 133.3 98 66.3
Rhsim08G0251700 Rhododendron simsii HOM05D003637 ORTHO05D004175 1.9e-29 133.3 94 69.1
ATR1136G178 Amborella trichopoda HOM05D003637 ORTHO05D004175 2.5e-29 132.9 94 67.0
CiPaw.03G014200 Carya illinoinensis HOM05D003637 ORTHO05D004175 3.3e-29 132.5 98 67.3
Oeu004354.1 Olea europaea HOM05D003637 ORTHO05D004175 3.3e-29 132.5 98 66.3
arahy.Tifrunner.gnm1.ann1.JT5ZHZ Arachis hypogaea HOM05D003637 ORTHO05D004175 4.3e-29 132.1 94 69.1
Manes.02G201900 Manihot esculenta HOM05D003637 ORTHO05D004175 4.3e-29 132.1 98 66.3
Oeu015342.1 Olea europaea HOM05D003637 ORTHO05D004175 4.3e-29 132.1 98 66.3
Medtr1g057860 Medicago truncatula HOM05D003637 ORTHO05D004175 5.6e-29 131.7 94 71.3
Psat6g083160 Pisum sativum HOM05D003637 ORTHO05D004175 5.6e-29 131.7 94 71.3
GSVIVG01036287001 Vitis vinifera HOM05D003637 ORTHO05D004175 5.6e-29 131.7 98 66.3
CANSAT64G0718 Cannabis sativa HOM05D003637 ORTHO05D004175 7.3e-29 131.3 98 67.3
Potri.019G071400 Populus trichocarpa HOM05D003637 ORTHO05D004175 7.3e-29 131.3 98 67.3
Sabra19G0083400 Salix brachista HOM05D003637 ORTHO05D004175 7.3e-29 131.3 98 67.3
Migut.E00203 Erythranthe guttata HOM05D003637 ORTHO05D004175 9.5e-29 131.0 98 64.3
RcHm_v2.0_Chr6g0251201 Rosa chinensis HOM05D003637 ORTHO05D004175 9.5e-29 131.0 98 65.3
Nn3g21609 Nelumbo nucifera HOM05D003637 ORTHO05D004175 1.6e-28 130.2 98 65.3
QL93p0073_0666 Quercus lobata HOM05D003637 ORTHO05D004175 1.6e-28 130.2 98 65.3
SGA_v2.0_scaffold87G27078 Striga asiatica HOM05D003637 ORTHO05D004175 1.6e-28 130.2 95 67.4
CANSAT35G0345 Cannabis sativa HOM05D003637 ORTHO05D004175 2.1e-28 129.8 98 66.3
MBI06_g32172_MAGBIO Magnolia biondii HOM05D003637 ORTHO05D004175 2.1e-28 129.8 95 67.4
QL08p063032 Quercus lobata HOM05D002302 ORTHO05D002728 2.1e-28 129.8 98 65.3
QL09p001806 Quercus lobata HOM05D003637 ORTHO05D004175 2.1e-28 129.8 94 67.0
QL11p001805 Quercus lobata HOM05D003637 ORTHO05D004175 2.1e-28 129.8 94 67.0
arahy.Tifrunner.gnm1.ann1.5D638A Arachis hypogaea HOM05D003637 ORTHO05D004175 2.8e-28 129.4 94 68.1
Ciclev10018820m.g Citrus clementina HOM05D003637 ORTHO05D004175 2.8e-28 129.4 98 64.3
Eucgr.F02946 Eucalyptus grandis HOM05D003637 ORTHO05D004175 2.8e-28 129.4 94 67.0
FvH4_2g00780 Fragaria vesca HOM05D003637 ORTHO05D004175 2.8e-28 129.4 98 64.3
FAN24G0737 Fragaria x ananassa HOM05D003637 ORTHO05D004175 2.8e-28 129.4 98 64.3
FAN27G1433 Fragaria x ananassa HOM05D003637 ORTHO05D004175 2.8e-28 129.4 98 64.3
Lj4g0018134 Lotus japonicus HOM05D003637 ORTHO05D004175 2.8e-28 129.4 94 68.1
TPR.G29194 Trifolium pratense HOM05D003637 ORTHO05D004175 2.8e-28 129.4 94 70.2
arahy.Tifrunner.gnm1.ann1.TE3K01 Arachis hypogaea HOM05D003637 ORTHO05D004175 3.6e-28 129.0 94 68.1
HanXRQChr07g0194841 Helianthus annuus HOM05D003637 ORTHO05D004175 3.6e-28 129.0 94 66.0
SalBow8G3371 Salvia bowleyana HOM05D003637 ORTHO05D004175 3.6e-28 129.0 98 65.3
Eucgr.E00010 Eucalyptus grandis HOM05D003637 ORTHO05D004175 4.7e-28 128.6 94 67.0
Lalb_Chr16g0387641 Lupinus albus HOM05D003637 ORTHO05D004175 4.7e-28 128.6 94 67.0
Prupe.8G006900 Prunus persica HOM05D003637 ORTHO05D004175 4.7e-28 128.6 98 65.3
QL05p083460 Quercus lobata HOM05D002302 ORTHO05D004175 4.7e-28 128.6 98 64.3
FAN20G2805 Fragaria x ananassa HOM05D003637 ORTHO05D004175 6.2e-28 128.3 98 64.3
MD05G1003500 Malus domestica HOM05D003637 ORTHO05D004175 6.2e-28 128.3 98 64.3
QL07p006103 Quercus lobata HOM05D000176 ORTHO05D000106 6.2e-28 128.3 98 64.3
MD10G1004600 Malus domestica HOM05D003637 ORTHO05D004175 8.0e-28 127.9 98 65.3
Mapoly0125s0016 Marchantia polymorpha HOM05D003637 ORTHO05D004175 8.0e-28 127.9 94 64.9
Glyma.08G042400 Glycine max HOM05D003637 ORTHO05D004175 1.1e-27 127.5 94 68.1
THA.LOC104820917 Tarenaya hassleriana HOM05D003637 ORTHO05D004175 1.1e-27 127.5 98 63.3
MBI03_g13500_MAGBIO Magnolia biondii HOM05D003637 ORTHO05D004175 1.4e-27 127.1 95 64.2
Ca_14602_v3 Cicer arietinum L. HOM05D003637 ORTHO05D004175 1.8e-27 126.7 94 68.1
CsaV3_2G033230 Cucumis sativus L. HOM05D003637 ORTHO05D004175 1.8e-27 126.7 98 63.3
MSTRG.13350 Avicennia marina HOM05D003637 ORTHO05D004175 2.3e-27 126.3 98 62.2
ClCG11G008420 Citrullus lanatus HOM05D003637 ORTHO05D004175 2.3e-27 126.3 98 65.3
MELO3C008093.2 Cucumis melo HOM05D003637 ORTHO05D004175 2.3e-27 126.3 98 63.3
Peaxi162Scf00194g01048 Petunia axillaris HOM05D003637 ORTHO05D004175 2.3e-27 126.3 98 63.3
TWI38G2004 Tripterygium wilfordii HOM05D003637 ORTHO05D004175 2.3e-27 126.3 98 60.2
TWI39G1182 Tripterygium wilfordii HOM05D003637 ORTHO05D004175 2.3e-27 126.3 98 61.2
Atru.chr13.2499 Acer truncatum HOM05D003637 ORTHO05D004175 4.0e-27 125.6 98 63.3
Atru.chr13.2508 Acer truncatum HOM05D003637 ORTHO05D004175 4.0e-27 125.6 98 63.3
Cpa.g.sc1431.2 Carica papaya HOM05D003637 ORTHO05D004175 4.0e-27 125.6 98 62.2
Glyma.05G234900 Glycine max HOM05D003637 ORTHO05D004175 4.0e-27 125.6 94 68.1
Lj9C543T19 Lonicera japonica HOM05D003637 ORTHO05D004175 4.0e-27 125.6 98 61.2
Medtr5g091860 Medicago truncatula HOM05D003637 ORTHO05D004175 4.0e-27 125.6 94 68.1
Sed0019638 Sechium edule HOM05D003637 ORTHO05D004175 5.2e-27 125.2 98 64.3
Os05g0150900 Oryza sativa ssp. japonica HOM05D003637 ORTHO05D004175 8.9e-27 124.4 98 63.3
VMungo0251G0405 Vigna mungo HOM05D003637 ORTHO05D004175 8.9e-27 124.4 98 65.3
Eucgr.E00009 Eucalyptus grandis HOM05D003637 ORTHO05D004175 1.2e-26 124.0 94 63.8
Zm00001eb354240 Zea mays HOM05D003637 ORTHO05D004175 2.0e-26 123.2 98 60.2
PSO782G5164 Papaver somniferum HOM05D003637 ORTHO05D004175 2.6e-26 122.9 98 62.2
HPP92_000901 Vanilla planifolia HOM05D003637 ORTHO05D004175 2.6e-26 122.9 98 65.3
Cc04_g00120 Coffea canephora HOM05D003637 ORTHO05D004175 7.5e-26 121.3 98 62.2
Zm00001eb267790 Zea mays HOM05D003637 ORTHO05D004175 9.8e-26 120.9 98 61.2
PSO063G3025 Papaver somniferum HOM05D003637 ORTHO05D004175 1.3e-25 120.6 98 61.2
SGA_v2.0_scaffold63G21735 Striga asiatica HOM05D003637 ORTHO05D004175 1.3e-25 120.6 98 59.2
PSO513G0157 Papaver somniferum HOM05D003637 ORTHO05D004175 1.7e-25 120.2 96 61.5
Phvul.002G320100 Phaseolus vulgaris HOM05D003637 ORTHO05D004175 2.2e-25 119.8 98 63.3
Duzib106G1310 Durio zibethinus HOM05D003637 ORTHO05D004175 3.7e-25 119.0 97 62.9
Aa31LG11G13210 Aethionema arabicum HOM05D003637 ORTHO05D004175 8.3e-25 117.9 95 60.0
CAN.G1379.10 Capsicum annuum HOM05D003637 ORTHO05D004175 8.3e-25 117.9 98 61.2
ECA238G2554 Erigeron canadensis HOM05D003637 ORTHO05D004175 8.3e-25 117.9 98 59.2
Lsat_1_v5_gn_8_62500 Lactuca sativa HOM05D003637 ORTHO05D004175 8.3e-25 117.9 94 58.5
Nitab4.5_0000110g0370 Nicotiana tabacum HOM05D003637 ORTHO05D004175 8.3e-25 117.9 98 60.2
Nitab4.5_0003246g0090 Nicotiana tabacum HOM05D003637 ORTHO05D004175 8.3e-25 117.9 98 60.2
CARHR076770 Cardamine hirsuta HOM05D003637 ORTHO05D004175 1.1e-24 117.5 95 61.1
Solyc01g102800.3 Solanum lycopersicum HOM05D003637 ORTHO05D004175 1.4e-24 117.1 98 60.2
Sopen01g045200 Solanum pennellii HOM05D003637 ORTHO05D004175 1.4e-24 117.1 98 60.2
PGSC0003DMG400018260 Solanum tuberosum HOM05D003637 ORTHO05D004175 1.4e-24 117.1 98 60.2
Thecc.05G195900 Theobroma cacao HOM05D003637 ORTHO05D004175 1.4e-24 117.1 100 60.0
Duzib177G0609 Durio zibethinus HOM05D003637 ORTHO05D004175 1.9e-24 116.7 100 60.0
Aa31LG5G13230 Aethionema arabicum HOM05D003637 ORTHO05D004175 2.4e-24 116.3 95 61.1
AagrBONN_evm.TU.Sc2ySwM_344.5308 Anthoceros agrestis HOM05D003637 ORTHO05D004175 3.2e-24 115.9 100 62.0
BcaB04g19390 Brassica carinata HOM05D003637 ORTHO05D004175 4.1e-24 115.5 95 61.1
BraA03t12479Z Brassica rapa HOM05D003637 ORTHO05D004175 7.0e-24 114.8 95 61.1
Thhalv10020033m.g Eutrema salsugineum HOM05D003637 ORTHO05D004175 7.0e-24 114.8 95 61.1
C03p40270 Brassica napus HOM05D003637 ORTHO05D004175 9.2e-24 114.4 95 61.1
BolC3t16292H Brassica oleracea HOM05D003637 ORTHO05D004175 9.2e-24 114.4 95 61.1
Gohir.A08G225700 Gossypium hirsutum HOM05D003637 ORTHO05D004175 9.2e-24 114.4 100 60.0
Gohir.D08G246100 Gossypium hirsutum HOM05D003637 ORTHO05D004175 9.2e-24 114.4 100 60.0
CBR_g19630 Chara braunii HOM05D003637 ORTHO05D004175 1.2e-23 114.0 105 55.2
Lsat_1_v5_gn_2_108061 Lactuca sativa HOM05D003637 ORTHO05D004175 2.1e-23 113.2 94 60.6
AL3G12170 Arabidopsis lyrata HOM05D003637 ORTHO05D004175 2.7e-23 112.8 95 61.1
AT3G02760 Arabidopsis thaliana HOM05D003637 ORTHO05D004175 2.7e-23 112.8 95 61.1
BcaNung05408 Brassica carinata HOM05D003637 ORTHO05D004175 3.5e-23 112.5 95 60.0
A03p33090 Brassica napus HOM05D003637 ORTHO05D004175 4.6e-23 112.1 95 60.0
Carub.0003s0186 Capsella rubella HOM05D003637 ORTHO05D004175 4.6e-23 112.1 95 61.1
Sp3g01790 Schrenkiella parvula HOM05D003637 ORTHO05D004175 4.6e-23 112.1 95 60.0
BcaB04g21398 Brassica carinata HOM05D003637 ORTHO05D004175 6.0e-23 111.7 95 58.9
COL.COLO4_20337 Corchorus olitorius HOM05D003637 ORTHO05D004175 6.0e-23 111.7 100 57.0
Gorai.004G262600 Gossypium raimondii HOM05D003637 ORTHO05D004175 6.0e-23 111.7 100 59.0
Nitab4.5_0001497g0160 Nicotiana tabacum HOM05D003637 ORTHO05D004175 7.8e-23 111.3 98 57.1
BolC1t05898H Brassica oleracea HOM05D003637 ORTHO05D004175 1.3e-22 110.5 95 58.9
PSO210G5637 Papaver somniferum HOM05D003637 ORTHO05D004175 1.3e-22 110.5 97 56.7
BNapus_Darmor_BZH_scaffold_122p00030 Brassica napus HOM05D003637 ORTHO05D004175 1.7e-22 110.2 95 58.9
Haze_10274 Corylus avellana HOM05D000058 ORTHO05D004175 3.0e-22 109.4 116 50.9
BNapus_Darmor_BZH_scaffold_99p00050 Brassica napus HOM05D003637 ORTHO05D004175 1.5e-21 107.1 95 57.9
HanXRQChr01g0009571 Helianthus annuus HOM05D003637 ORTHO05D004175 1.5e-21 107.1 83 61.4
Lsat_1_v5_gn_3_107861 Lactuca sativa HOM05D003637 ORTHO05D004175 5.6e-21 105.1 98 57.1
Nitab4.5_0002446g0080 Nicotiana tabacum HOM05D003637 ORTHO05D004175 1.1e-19 100.9 95 54.7
Medtr1g057880 Medicago truncatula HOM05D003637 ORTHO05D004175 6.8e-19 98.2 91 59.3
Thhalv10001912m.g Eutrema salsugineum HOM05D003637 ORTHO05D004175 1.3e-17 94.0 81 55.6
Medtr1g022010 Medicago truncatula HOM05D003637 ORTHO05D004175 1.4e-16 90.5 106 51.9
Cfa022007 Carpinus fangiana HOM05D003637 ORTHO05D004175 7.1e-16 88.2 91 50.5
Cre02.g142352 Chlamydomonas reinhardtii HOM05D003637 ORTHO05D004175 1.1e-13 80.9 91 46.2
SEGI_18391 Sequoiadendron giganteum HOM05D001787 ORTHO05D003488 4.3e-13 79.0 50 70.0
PSO210G6366 Papaver somniferum HOM05D003637 ORTHO05D004175 6.2e-12 75.1 112 41.1
Nn1g00273 Nelumbo nucifera HOM05D003637 ORTHO05D004175 1.5e-10 70.5 62 58.1
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 2.0e-10 70.1 72 51.4
TAR374G1272 Trochodendron aralioides HOM05D003637 ORTHO05D004175 3.8e-09 65.9 37 75.7
SEGI_10049 Sequoiadendron giganteum HOM05D002875 ORTHO05D003215 3.9e-06 55.8 38 68.4
Cc11_g04140 Coffea canephora HOM05D003637 ORTHO05D004175 8.7e-06 54.7 29 82.8


User provided reference genes

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