Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 4.4e-288 993.8 465 100.0
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 2.7e-229 798.5 459 78.0
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 9.1e-225 783.5 459 75.8
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.2e-224 783.1 458 77.7
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 3.4e-224 781.6 459 76.7
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 5.0e-223 777.7 465 75.7
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 1.2e-221 773.1 458 76.2
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 7.9e-221 770.4 458 76.4
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.8e-220 769.2 464 75.0
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.8e-220 769.2 464 75.0
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 3.0e-220 768.5 458 76.0
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 3.0e-220 768.5 473 73.4
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 3.0e-220 768.5 458 76.0
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 6.7e-220 767.3 458 74.9
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.1e-219 766.5 465 74.6
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-219 766.5 458 75.5
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 1.1e-219 766.5 458 75.5
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 2.0e-219 765.8 458 75.5
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 4.4e-219 764.6 458 75.8
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 5.7e-219 764.2 460 74.8
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 7.4e-219 763.8 458 75.1
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 7.4e-219 763.8 465 74.0
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.7e-218 762.7 465 74.4
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 1.7e-218 762.7 465 74.6
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 2.2e-218 762.3 458 75.5
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 2.2e-218 762.3 458 75.8
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 6.3e-218 760.8 458 74.9
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 6.3e-218 760.8 465 74.4
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 8.2e-218 760.4 458 74.9
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 2.4e-217 758.8 460 74.6
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 3.1e-217 758.4 458 73.6
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 4.1e-217 758.1 458 72.9
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 5.3e-217 757.7 458 73.6
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.2e-216 756.5 458 74.7
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.5e-216 756.1 458 73.4
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 2.0e-216 755.7 458 72.9
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 2.0e-216 755.7 458 74.0
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 3.5e-216 755.0 458 75.1
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 3.5e-216 755.0 458 73.8
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 4.5e-216 754.6 458 75.8
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 1.7e-215 752.7 458 74.7
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 2.9e-215 751.9 447 75.6
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 8.5e-215 750.4 458 74.0
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.5e-214 749.6 458 73.4
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 2.5e-214 748.8 475 71.6
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 2.5e-214 748.8 466 74.2
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 3.2e-214 748.4 458 73.6
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 3.2e-214 748.4 459 73.6
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 3.2e-214 748.4 458 74.5
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 5.5e-214 747.7 458 73.1
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 2.1e-213 745.7 465 73.3
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 2.7e-213 745.3 458 73.8
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 2.7e-213 745.3 458 73.1
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 2.7e-213 745.3 456 73.9
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 1.8e-212 742.7 460 72.8
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 2.3e-212 742.3 458 73.6
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 5.2e-212 741.1 463 72.4
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 6.7e-212 740.7 466 72.3
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 5.7e-211 737.6 458 72.3
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 1.3e-210 736.5 460 72.2
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 2.8e-210 735.3 460 72.0
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 2.8e-210 735.3 460 72.0
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 5.3e-209 731.1 456 73.2
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 7.0e-209 730.7 463 70.4
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.2e-208 729.9 458 72.7
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 4.5e-208 728.0 458 72.5
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 7.7e-208 727.2 463 71.7
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.0e-207 726.9 463 69.8
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 2.2e-207 725.7 458 72.5
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.6e-205 719.5 458 71.8
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 3.6e-205 718.4 460 70.9
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 8.0e-205 717.2 460 70.9
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 8.0e-205 717.2 460 70.9
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 1.0e-204 716.8 460 70.9
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 4.0e-204 714.9 460 70.7
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 9.8e-203 710.3 458 69.7
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 6.3e-202 707.6 463 69.5
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 1.4e-201 706.4 460 70.2
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.8e-201 706.1 452 71.7
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 3.5e-200 701.8 458 69.9
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 3.8e-199 698.4 485 66.0
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 6.5e-199 697.6 463 70.8
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 8.0e-197 690.6 458 69.4
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 8.0e-197 690.6 458 69.2
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 4.0e-196 688.3 496 65.5
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 1.2e-195 686.8 465 65.4
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 4.4e-195 684.9 458 68.3
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 5.2e-188 661.4 394 75.6
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 3.9e-183 645.2 493 61.9
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.1e-177 627.1 458 64.0
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 2.3e-175 619.4 458 60.0
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 3.7e-170 602.1 455 63.1
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.8e-165 585.9 342 78.7
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 1.3e-162 577.0 345 77.1
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.9e-162 575.9 343 76.4
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.7e-162 575.5 342 77.8
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 8.4e-162 574.3 346 77.2
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 8.4e-162 574.3 346 77.2
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.6e-160 570.1 343 76.4
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.8e-157 559.3 341 76.0
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 6.2e-157 558.1 325 78.8
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.5e-155 553.5 342 74.3
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.2e-154 549.7 341 74.5
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.3e-150 534.6 294 81.3
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 8.4e-146 521.2 343 69.4
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 3.4e-139 499.2 294 77.2
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.9e-137 493.4 277 79.4
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 4.2e-137 492.3 341 68.3
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 5.5e-137 491.9 294 77.2
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.1e-133 479.9 295 74.6
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 1.4e-132 477.2 280 76.8
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.6e-123 446.4 289 70.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 5.9e-115 418.7 477 42.6
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 6.5e-106 388.7 486 38.7
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.2e-64 251.5 155 68.4
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 1.9e-49 201.1 163 61.3
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.3e-49 199.1 110 80.0
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.3e-49 199.1 110 80.0
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.6e-48 198.0 110 79.1
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 3.3e-33 147.1 93 73.1
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 2.4e-07 61.2 40 67.5


User provided reference genes

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