Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30019 Sequoiadendron giganteum HOM05D003044 ORTHO05D006672 0.0e+00 1501.5 889 100.0
CDE07G1072 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 9.8e-21 106.7 563 27.5
MBI11_g01313_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 2.8e-20 105.1 522 28.0
Nn6g34609 Nelumbo nucifera HOM05D003044 ORTHO05D001869 3.3e-16 91.7 589 29.9
TAR633G1492 Trochodendron aralioides HOM05D003044 ORTHO05D001869 2.8e-15 88.6 542 25.5
Duzib106G0590 Durio zibethinus HOM05D003044 ORTHO05D001869 1.8e-14 85.9 553 26.0
Gohir.A05G396000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 1.5e-13 82.8 565 26.0
MD07G1063100 Malus domestica HOM05D003044 ORTHO05D001869 1.5e-13 82.8 496 26.8
Nn2g14384 Nelumbo nucifera HOM05D003044 ORTHO05D001869 2.0e-13 82.4 569 26.7
Nn6g34615 Nelumbo nucifera HOM05D003044 ORTHO05D001869 2.0e-13 82.4 664 28.5
Oeu025606.1 Olea europaea HOM05D003044 ORTHO05D001869 2.0e-13 82.4 430 27.7
CAN.G1433.1 Capsicum annuum HOM05D003044 ORTHO05D001869 4.4e-13 81.3 374 27.8
Gorai.012G022500 Gossypium raimondii HOM05D003044 ORTHO05D001869 4.4e-13 81.3 571 26.4
SGA_v2.0_scaffold13G06427 Striga asiatica HOM05D003044 ORTHO05D001869 7.5e-13 80.5 554 26.7
SGA_v2.0_scaffold90G27707 Striga asiatica HOM05D003044 ORTHO05D001869 7.5e-13 80.5 507 28.2
CDE04G3330 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 9.8e-13 80.1 413 27.4
RcHm_v2.0_Chr1g0332241 Rosa chinensis HOM05D003044 ORTHO05D001869 9.8e-13 80.1 554 26.9
Sc12g0008100 Simmondsia chinensis HOM05D003044 ORTHO05D001869 9.8e-13 80.1 468 26.9
Glyma.20G070600 Glycine max HOM05D003044 ORTHO05D001869 1.7e-12 79.3 545 24.4
TWI63G0215 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 1.7e-12 79.3 343 36.2
Sopen05g033570 Solanum pennellii HOM05D003044 ORTHO05D001869 2.2e-12 79.0 572 29.2
ATR0697G055 Amborella trichopoda HOM05D003044 ORTHO05D001869 2.9e-12 78.6 560 25.5
Glyma.10G194700 Glycine max HOM05D003044 ORTHO05D001869 3.7e-12 78.2 546 29.7
PSO384G0573 Papaver somniferum HOM05D003044 ORTHO05D001869 3.7e-12 78.2 564 24.6
MSTRG.25774 Avicennia marina HOM05D005642 ORTHO05D006672 4.9e-12 77.8 355 27.9
Carub.0003s0988 Capsella rubella HOM05D003044 ORTHO05D001869 4.9e-12 77.8 501 26.9
Actinidia34738 Actinidia chinensis HOM05D003044 ORTHO05D001869 6.4e-12 77.4 536 27.4
Migut.A00441 Erythranthe guttata HOM05D005642 ORTHO05D006672 8.3e-12 77.0 254 35.4
Gohir.A05G396100 Gossypium hirsutum HOM05D003044 ORTHO05D001869 1.1e-11 76.6 562 26.9
TWI32G0776 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 1.1e-11 76.6 253 39.5
Atru.chr7.1133 Acer truncatum HOM05D006756 ORTHO05D001869 1.4e-11 76.3 411 25.3
arahy.Tifrunner.gnm1.ann1.4FD105 Arachis hypogaea HOM05D005642 ORTHO05D006672 1.4e-11 76.3 258 33.7
Sed0023754 Sechium edule HOM05D003044 ORTHO05D001869 1.4e-11 76.3 522 27.2
SalBow8G4661 Salvia bowleyana HOM05D005642 ORTHO05D006672 1.9e-11 75.9 253 32.8
GSVIVG01034601001 Vitis vinifera HOM05D003044 ORTHO05D001869 1.9e-11 75.9 381 27.0
arahy.Tifrunner.gnm1.ann1.KDL0BF Arachis hypogaea HOM05D005642 ORTHO05D006672 2.4e-11 75.5 258 37.6
Sed0010208 Sechium edule HOM05D003044 ORTHO05D001869 3.2e-11 75.1 538 27.9
Ciclev10007752m.g Citrus clementina HOM05D005642 ORTHO05D006672 4.1e-11 74.7 310 35.8
Lalb_Chr19g0128991 Lupinus albus HOM05D003044 ORTHO05D001869 4.1e-11 74.7 496 26.0
Mapoly0006s0069 Marchantia polymorpha HOM05D023241 ORTHO05D023499 4.1e-11 74.7 866 24.7
THA.LOC104823155 Tarenaya hassleriana HOM05D003044 ORTHO05D001869 4.1e-11 74.7 536 25.2
Thecc.10G119700 Theobroma cacao HOM05D003044 ORTHO05D001869 4.1e-11 74.7 525 25.5
THA.LOC104803598 Tarenaya hassleriana HOM05D005642 ORTHO05D006672 7.0e-11 73.9 254 35.4
MBI01_g36593_MAGBIO Magnolia biondii HOM05D006756 ORTHO05D001869 9.2e-11 73.6 470 28.5
Sp3g08960 Schrenkiella parvula HOM05D003044 ORTHO05D001869 9.2e-11 73.6 513 25.3
Migut.F01554 Erythranthe guttata HOM05D003044 ORTHO05D001869 1.2e-10 73.2 551 25.2
Lj2A36T50 Lonicera japonica HOM05D003044 ORTHO05D001869 1.6e-10 72.8 395 27.3
Aa31LG2G18900 Aethionema arabicum HOM05D005642 ORTHO05D006672 2.0e-10 72.4 261 34.1
VMungo0720G0604 Vigna mungo HOM05D003044 ORTHO05D001869 2.0e-10 72.4 538 26.8
Prupe.2G074800 Prunus persica HOM05D003044 ORTHO05D001869 2.7e-10 72.0 679 25.8
Hund03285 Selenicereus undatus HOM05D005642 ORTHO05D006672 2.7e-10 72.0 242 36.8
FvH4_7g05480 Fragaria vesca HOM05D003044 ORTHO05D001869 3.5e-10 71.6 541 25.5
Medtr1g040610 Medicago truncatula HOM05D003044 ORTHO05D001869 4.6e-10 71.2 614 23.8
Potri.018G006200 Populus trichocarpa HOM05D005642 ORTHO05D006672 4.6e-10 71.2 263 36.5
Hund19402 Selenicereus undatus HOM05D005642 ORTHO05D006672 4.6e-10 71.2 269 32.3
Dinv03806 Davidia involucrata HOM05D003044 ORTHO05D001869 6.0e-10 70.9 541 27.0
Manes.03G003300 Manihot esculenta HOM05D005642 ORTHO05D006672 6.0e-10 70.9 271 38.4
Ah.09g231710 Amaranthus hybridus HOM05D003044 ORTHO05D001869 7.8e-10 70.5 519 25.2
Ca_02761_v3 Cicer arietinum L. HOM05D006756 ORTHO05D001869 1.0e-09 70.1 402 26.1
Duzib128G0650 Durio zibethinus HOM05D003044 ORTHO05D001869 1.0e-09 70.1 581 25.8
Migut.F00829 Erythranthe guttata HOM05D003044 ORTHO05D001869 1.0e-09 70.1 548 28.1
Ca_15671_v3 Cicer arietinum L. HOM05D005642 ORTHO05D006672 1.3e-09 69.7 268 36.9
Lsat_1_v5_gn_8_21821 Lactuca sativa HOM05D003044 ORTHO05D001869 1.3e-09 69.7 534 25.3
Peaxi162Scf00046g00819 Petunia axillaris HOM05D006756 ORTHO05D001869 1.3e-09 69.7 409 25.7
BolC1t00742H Brassica oleracea HOM05D005642 ORTHO05D006672 1.7e-09 69.3 254 34.3
BolC3t16701H Brassica oleracea HOM05D003044 ORTHO05D001869 1.7e-09 69.3 478 26.8
BraA01t00636Z Brassica rapa HOM05D005642 ORTHO05D006672 1.7e-09 69.3 257 31.5
CiPaw.13G045500 Carya illinoinensis HOM05D003044 ORTHO05D001869 1.7e-09 69.3 533 27.2
Cc02_g09260 Coffea canephora HOM05D003044 ORTHO05D001869 1.7e-09 69.3 507 28.4
Dinv36508 Davidia involucrata HOM05D006756 ORTHO05D001869 1.7e-09 69.3 415 24.6
Thhalv10024763m.g Eutrema salsugineum HOM05D005642 ORTHO05D006672 1.7e-09 69.3 302 32.8
Phvul.009G100600 Phaseolus vulgaris HOM05D005642 ORTHO05D006672 1.7e-09 69.3 264 39.8
CANSAT11G2071 Cannabis sativa HOM05D006756 ORTHO05D001869 2.3e-09 68.9 397 25.4
ECA233G5261 Erigeron canadensis HOM05D003044 ORTHO05D001869 2.3e-09 68.9 501 25.1
Thhalv10019905m.g Eutrema salsugineum HOM05D003044 ORTHO05D001869 2.3e-09 68.9 568 24.3
TAR636G2086 Trochodendron aralioides HOM05D006756 ORTHO05D001869 2.3e-09 68.9 491 26.7
A01p06850 Brassica napus HOM05D005642 ORTHO05D006672 3.0e-09 68.6 257 31.5
Potri.010G244700 Populus trichocarpa HOM05D003044 ORTHO05D001869 3.0e-09 68.6 512 26.4
Prupe.1G460900 Prunus persica HOM05D005642 ORTHO05D006672 3.0e-09 68.6 256 38.7
Aa31LG3G3500 Aethionema arabicum HOM05D003044 ORTHO05D001869 5.0e-09 67.8 532 25.2
Ciclev10007561m.g Citrus clementina HOM05D006756 ORTHO05D001869 5.0e-09 67.8 397 26.4
Manes.07G084000 Manihot esculenta HOM05D003044 ORTHO05D001869 5.0e-09 67.8 551 26.7
PSO170G3270 Papaver somniferum HOM05D005642 ORTHO05D006672 5.0e-09 67.8 327 30.0
AUR62020612 Chenopodium quinoa HOM05D005642 ORTHO05D006672 6.6e-09 67.4 265 36.6
Hma1.2p1_0379F.1_g139820 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 6.6e-09 67.4 253 35.2
Sp7g29290 Schrenkiella parvula HOM05D005642 ORTHO05D006672 6.6e-09 67.4 262 30.5
Sed0007069 Sechium edule HOM05D005642 ORTHO05D006672 6.6e-09 67.4 279 35.8
C03p44310 Brassica napus HOM05D003044 ORTHO05D001869 8.6e-09 67.0 475 26.1
CSS0029861 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 8.6e-09 67.0 408 28.2
Oeu040012.1 Olea europaea HOM05D003044 ORTHO05D001869 8.6e-09 67.0 360 26.4
Potri.008G014800 Populus trichocarpa HOM05D003044 ORTHO05D001869 8.6e-09 67.0 526 25.7
QL12p025051 Quercus lobata HOM05D005642 ORTHO05D006672 8.6e-09 67.0 248 36.3
BcaC09g51922 Brassica carinata HOM05D005642 ORTHO05D006672 1.1e-08 66.6 254 35.4
C01p07620 Brassica napus HOM05D005642 ORTHO05D006672 1.1e-08 66.6 254 35.4
Ca_18140_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 1.9e-08 65.9 487 25.9
MD15G1108600 Malus domestica HOM05D005642 ORTHO05D006672 1.9e-08 65.9 249 38.6
Sc18g0000500 Simmondsia chinensis HOM05D006756 ORTHO05D001869 1.9e-08 65.9 480 26.7
CAN.G673.14 Capsicum annuum HOM05D005642 ORTHO05D006672 2.5e-08 65.5 346 28.6
ECA246G0678 Erigeron canadensis HOM05D005642 ORTHO05D006672 2.5e-08 65.5 301 28.9
Nitab4.5_0004131g0010 Nicotiana tabacum HOM05D005642 ORTHO05D006672 2.5e-08 65.5 266 31.6
MELO3C003630.2 Cucumis melo HOM05D005642 ORTHO05D006672 3.3e-08 65.1 314 33.4
Gohir.D04G018900 Gossypium hirsutum HOM05D003044 ORTHO05D001869 4.3e-08 64.7 557 25.1
Lalb_Chr01g0010681 Lupinus albus HOM05D003044 ORTHO05D001869 4.3e-08 64.7 382 27.2
Psat6g171360 Pisum sativum HOM05D003044 ORTHO05D001869 4.3e-08 64.7 525 26.1
DCAR_018987 Daucus carota HOM05D003044 ORTHO05D001869 5.6e-08 64.3 595 24.7
Gorai.012G022400 Gossypium raimondii HOM05D003044 ORTHO05D001869 5.6e-08 64.3 557 25.1
Lalb_Chr21g0312741 Lupinus albus HOM05D003044 ORTHO05D001869 5.6e-08 64.3 557 24.1
Dinv03494 Davidia involucrata HOM05D005642 ORTHO05D006672 7.3e-08 63.9 369 32.0
Nn2g12064 Nelumbo nucifera HOM05D006756 ORTHO05D001869 7.3e-08 63.9 414 25.6
Nn8g40457 Nelumbo nucifera HOM05D005642 ORTHO05D006672 7.3e-08 63.9 301 34.2
Peaxi162Scf00045g01740 Petunia axillaris HOM05D005642 ORTHO05D006672 7.3e-08 63.9 241 32.0
Ah.14g085720 Amaranthus hybridus HOM05D003044 ORTHO05D001869 9.5e-08 63.5 519 24.7
CSS0029793 Camellia sinensis var. sinensis HOM05D005642 ORTHO05D006672 9.5e-08 63.5 274 36.9
CiPaw.07G213400 Carya illinoinensis HOM05D005642 ORTHO05D006672 9.5e-08 63.5 327 34.9
MELO3C019915.2 Cucumis melo HOM05D003044 ORTHO05D001869 9.5e-08 63.5 709 24.3
HanXRQChr02g0049311 Helianthus annuus HOM05D003044 ORTHO05D001869 9.5e-08 63.5 466 25.1
MBI16_g31790_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 9.5e-08 63.5 297 31.0
Cpa.g.sc46.13 Carica papaya HOM05D006756 ORTHO05D001869 1.2e-07 63.2 434 24.4
Gohir.A06G055000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 1.2e-07 63.2 478 23.0
MSTRG.27548 Avicennia marina HOM05D003044 ORTHO05D001869 1.6e-07 62.8 380 28.7
CANSAT56G3871 Cannabis sativa HOM05D003044 ORTHO05D001869 1.6e-07 62.8 549 25.7
MD02G1029800 Malus domestica HOM05D006756 ORTHO05D001869 1.6e-07 62.8 601 25.1
MD15G1171200 Malus domestica HOM05D006756 ORTHO05D001869 1.6e-07 62.8 595 25.4
Gorai.010G063000 Gossypium raimondii HOM05D006756 ORTHO05D001869 2.1e-07 62.4 474 23.6
TAR636G0745 Trochodendron aralioides HOM05D006756 ORTHO05D001869 2.1e-07 62.4 491 25.9
SGA_v2.0_scaffold27G11668 Striga asiatica HOM05D005642 ORTHO05D006672 2.8e-07 62.0 246 30.5
TWI63G0823 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 2.8e-07 62.0 526 27.2
Ah.11g043760 Amaranthus hybridus HOM05D005642 ORTHO05D006672 3.6e-07 61.6 290 33.1
EL10Ac2g03740 Beta vulgaris HOM05D005642 ORTHO05D006672 3.6e-07 61.6 263 32.7
BcaNung04578 Brassica carinata HOM05D005642 ORTHO05D006672 3.6e-07 61.6 268 32.5
HanXRQChr17g0538601 Helianthus annuus HOM05D005642 ORTHO05D006672 3.6e-07 61.6 303 29.7
AT4G31430 Arabidopsis thaliana HOM05D005642 ORTHO05D006672 4.7e-07 61.2 283 31.8
HanXRQChr08g0217351 Helianthus annuus HOM05D003044 ORTHO05D001869 4.7e-07 61.2 476 25.4
BraA08t33825Z Brassica rapa HOM05D005642 ORTHO05D006672 8.0e-07 60.5 266 27.8
MELO3C010331.2 Cucumis melo HOM05D006756 ORTHO05D001869 8.0e-07 60.5 483 24.2
RcHm_v2.0_Chr6g0304881 Rosa chinensis HOM05D005642 ORTHO05D006672 8.0e-07 60.5 246 39.4
AL7G20630 Arabidopsis lyrata HOM05D005642 ORTHO05D006672 1.1e-06 60.1 403 28.5
ClCG06G011280 Citrullus lanatus HOM05D006756 ORTHO05D001869 1.1e-06 60.1 426 24.2
Cc06_g08320 Coffea canephora HOM05D006756 ORTHO05D001869 1.1e-06 60.1 414 23.4
CsaV3_6G004440 Cucumis sativus L. HOM05D003044 ORTHO05D001869 1.1e-06 60.1 694 23.8
FAN27G2209 Fragaria x ananassa HOM05D005642 ORTHO05D006672 1.1e-06 60.1 257 32.7
Glyma.04G146900 Glycine max HOM05D006756 ORTHO05D001869 1.1e-06 60.1 513 24.8
PGR044G1498 Punica granatum HOM05D003044 ORTHO05D001869 1.1e-06 60.1 499 24.0
VMungo1309G0073 Vigna mungo HOM05D005642 ORTHO05D006672 1.1e-06 60.1 262 37.8
Actinidia06420 Actinidia chinensis HOM05D005642 ORTHO05D006672 1.4e-06 59.7 269 32.7
Hund09258 Selenicereus undatus HOM05D006756 ORTHO05D001869 1.4e-06 59.7 587 26.7
Thecc.09G006400 Theobroma cacao HOM05D005642 ORTHO05D006672 1.4e-06 59.7 291 36.1
Carub.0007s0913 Capsella rubella HOM05D005642 ORTHO05D006672 1.8e-06 59.3 379 28.2
Hma1.2p1_0098F.1_g048320 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 1.8e-06 59.3 407 26.8
TPR.G19799 Trifolium pratense HOM05D003044 ORTHO05D001869 1.8e-06 59.3 617 22.7
VMungo1309G0147 Vigna mungo HOM05D006756 ORTHO05D001869 1.8e-06 59.3 410 24.6
BcaC01g01089 Brassica carinata HOM05D005642 ORTHO05D006672 3.1e-06 58.5 263 30.4
C03p87980 Brassica napus HOM05D005642 ORTHO05D006672 3.1e-06 58.5 263 30.4
CANSAT78G0024 Cannabis sativa HOM05D005642 ORTHO05D006672 3.1e-06 58.5 303 30.0
CiPaw.03G245600 Carya illinoinensis HOM05D006756 ORTHO05D001869 3.1e-06 58.5 409 26.2
Glyma.06G075900 Glycine max HOM05D005642 ORTHO05D006672 3.1e-06 58.5 259 32.8
Gohir.D06G054000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 3.1e-06 58.5 472 24.6
PGR044G2675 Punica granatum HOM05D005642 ORTHO05D006672 3.1e-06 58.5 286 34.6
SalBow4G3316 Salvia bowleyana HOM05D005642 ORTHO05D006672 3.1e-06 58.5 303 26.7
Gohir.D04G019000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 4.0e-06 58.2 875 24.5
FvH4_2g36900 Fragaria vesca HOM05D005642 ORTHO05D006672 5.2e-06 57.8 249 37.8
Lalb_Chr11g0072181 Lupinus albus HOM05D006756 ORTHO05D001869 6.8e-06 57.4 538 24.5
PSO063G4833 Papaver somniferum HOM05D005642 ORTHO05D006672 6.8e-06 57.4 332 31.9
PSO339G5639 Papaver somniferum HOM05D003044 ORTHO05D001869 6.8e-06 57.4 567 23.8
arahy.Tifrunner.gnm1.ann1.L57GI5 Arachis hypogaea HOM05D006756 ORTHO05D001869 8.9e-06 57.0 288 26.4


User provided reference genes

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