Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.2e-161 573.2 293 100.0
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 2.7e-142 508.8 293 88.7
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 8.4e-51 204.9 237 48.9
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.4e-50 204.1 237 48.9
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 1.9e-50 203.8 238 49.2
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 2.4e-50 203.4 237 48.5
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 3.2e-50 203.0 238 48.3
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 3.2e-50 203.0 319 40.8
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 4.2e-50 202.6 277 44.4
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 5.4e-50 202.2 290 42.4
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 7.1e-50 201.8 241 48.5
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 7.1e-50 201.8 232 52.2
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 9.3e-50 201.4 241 48.5
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 2.7e-49 199.9 240 48.3
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 3.5e-49 199.5 240 48.3
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.0e-48 198.0 227 48.9
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 1.7e-48 197.2 237 46.0
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 3.0e-48 196.4 242 45.5
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 3.9e-48 196.1 237 46.4
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 5.1e-48 195.7 237 46.0
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 5.1e-48 195.7 237 46.0
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 5.1e-48 195.7 289 43.6
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 6.6e-48 195.3 244 48.0
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 6.6e-48 195.3 287 42.9
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 1.1e-47 194.5 236 47.5
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 1.5e-47 194.1 245 45.7
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 1.9e-47 193.7 238 49.2
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 2.5e-47 193.4 298 40.3
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 3.3e-47 193.0 262 43.9
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 4.3e-47 192.6 225 48.9
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 4.3e-47 192.6 256 44.9
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 5.6e-47 192.2 260 43.8
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.6e-47 192.2 260 43.8
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 5.6e-47 192.2 217 48.8
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 5.6e-47 192.2 240 47.5
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 7.3e-47 191.8 260 43.8
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 7.3e-47 191.8 247 47.0
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 1.3e-46 191.0 252 47.2
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.3e-46 191.0 238 47.9
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 1.3e-46 191.0 233 48.1
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 1.6e-46 190.7 244 47.5
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 2.1e-46 190.3 283 43.8
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 2.1e-46 190.3 260 45.0
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 2.1e-46 190.3 260 45.4
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 2.8e-46 189.9 240 46.2
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 4.8e-46 189.1 248 46.8
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 6.2e-46 188.7 234 46.2
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 8.1e-46 188.3 244 47.5
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 8.1e-46 188.3 243 47.7
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 8.1e-46 188.3 236 46.6
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.1e-45 188.0 231 47.2
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 1.1e-45 188.0 315 40.3
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 1.1e-45 188.0 269 43.1
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.4e-45 187.6 238 46.6
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.4e-45 187.6 240 46.2
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 1.8e-45 187.2 236 46.6
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 2.4e-45 186.8 220 50.5
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 2.4e-45 186.8 294 41.8
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 2.4e-45 186.8 229 47.2
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 3.1e-45 186.4 244 44.3
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.1e-45 186.4 260 42.7
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 9.0e-45 184.9 273 42.9
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 9.0e-45 184.9 239 46.0
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 9.0e-45 184.9 297 40.4
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 1.2e-44 184.5 237 46.0
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.2e-44 184.5 238 46.6
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.2e-44 184.5 244 44.3
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.2e-44 184.5 244 44.3
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 1.5e-44 184.1 244 45.9
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 2.0e-44 183.7 258 43.8
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 3.4e-44 183.0 236 46.2
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 4.5e-44 182.6 245 44.5
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.5e-44 182.6 240 44.6
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 5.8e-44 182.2 240 43.8
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 7.6e-44 181.8 237 46.0
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 9.9e-44 181.4 243 45.7
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 9.9e-44 181.4 273 41.8
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 1.3e-43 181.0 235 44.3
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 2.9e-43 179.9 226 46.0
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 2.9e-43 179.9 242 43.8
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 3.8e-43 179.5 238 46.6
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 3.8e-43 179.5 227 46.3
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 4.9e-43 179.1 235 43.4
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 6.4e-43 178.7 236 44.9
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 1.4e-42 177.6 271 40.2
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 7.1e-42 175.3 241 44.0
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 7.1e-42 175.3 235 45.1
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 7.1e-42 175.3 210 47.1
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 9.3e-42 174.9 241 44.0
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 9.3e-42 174.9 237 44.3
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 3.5e-41 172.9 245 42.4
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 7.9e-41 171.8 248 42.3
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 7.9e-41 171.8 242 43.4
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 1.0e-40 171.4 236 44.5
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 1.0e-40 171.4 237 43.0
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.8e-40 170.6 210 47.1
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 1.5e-39 167.5 234 43.6
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 9.6e-39 164.9 227 44.5
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 6.2e-38 162.2 238 45.0
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 6.2e-38 162.2 249 39.8
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 1.1e-37 161.4 313 36.1
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 8.4e-35 151.8 206 46.1
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 1.6e-33 147.5 248 37.9
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 2.1e-33 147.1 258 39.1
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.6e-30 137.5 163 47.9
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 4.0e-29 132.9 237 38.0
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 5.3e-29 132.5 175 45.7
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 8.4e-27 125.2 204 42.2
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 1.1e-26 124.8 134 52.2
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 7.9e-25 118.6 140 50.0
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.3e-24 117.9 138 47.1
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 1.1e-23 114.8 138 47.1
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.5e-23 114.4 165 42.4
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 8.2e-22 108.6 120 47.5
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.6e-20 103.6 180 38.9
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 8.5e-19 98.6 95 56.8
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 1.9e-18 97.4 129 45.0
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 3.3e-15 86.7 178 37.6
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 4.3e-15 86.3 115 47.0
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 1.3e-14 84.7 114 43.0
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 1.1e-13 81.6 105 46.7
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 5.9e-12 75.9 106 44.3


User provided reference genes

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