Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29886 Sequoiadendron giganteum HOM05D004911 ORTHO05D005930 7.7e-144 513.8 267 100.0
SEGI_27580 Sequoiadendron giganteum HOM05D001434 ORTHO05D004586 2.8e-61 239.6 128 93.0
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 1.2e-40 171.0 143 65.0
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 2.0e-35 153.7 143 55.9
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 1.3e-34 151.0 143 52.4
ATR0624G005 Amborella trichopoda HOM05D004911 ORTHO05D005930 1.9e-33 147.1 132 60.6
TAR371G0490 Trochodendron aralioides HOM05D004911 ORTHO05D005930 5.5e-33 145.6 143 55.9
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 7.2e-33 145.2 142 56.3
SEGI_32983 Sequoiadendron giganteum HOM05D000265 ORTHO05D000161 4.4e-30 136.0 128 57.0
SEGI_35620 Sequoiadendron giganteum HOM05D000029 ORTHO05D002500 6.3e-29 132.1 102 65.7
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 5.3e-28 129.0 139 46.8
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 7.0e-28 128.6 141 50.4
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 2.2e-26 123.6 140 46.4
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 3.8e-26 122.9 140 45.7
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 7.2e-25 118.6 138 45.7
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 1.4e-23 114.4 139 47.5
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 4.0e-23 112.8 145 49.0
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 5.2e-23 112.5 139 46.8
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 3.3e-22 109.8 144 43.8
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 4.4e-22 109.4 145 46.9
SEGI_21969 Sequoiadendron giganteum HOM05D005509 ORTHO05D006411 1.3e-21 107.8 103 59.2
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 1.7e-21 107.5 139 47.5
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 2.2e-21 107.1 139 44.6
SEGI_41185 Sequoiadendron giganteum HOM05D000103 ORTHO05D000049 1.1e-20 104.8 72 69.4
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 1.1e-20 104.8 139 46.8
SEGI_36164 Sequoiadendron giganteum HOM05D002867 ORTHO05D003336 1.4e-20 104.4 77 68.8
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 1.8e-20 104.0 154 40.3
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 1.8e-20 104.0 140 45.0
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 3.1e-20 103.2 140 45.0
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 7.0e-20 102.1 140 44.3
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 1.6e-19 100.9 139 42.4
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 2.7e-19 100.1 142 42.3
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 2.7e-19 100.1 148 44.6
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 4.5e-19 99.4 145 44.8
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 5.9e-19 99.0 142 42.3
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 1.0e-18 98.2 146 44.5
SEGI_21314 Sequoiadendron giganteum HOM05D000103 ORTHO05D000049 2.9e-18 96.7 78 59.0
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 5.0e-18 95.9 138 44.2
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 6.5e-18 95.5 142 37.3
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.1e-17 94.7 140 43.6
AagrBONN_evm.TU.Sc2ySwM_228.3553 Anthoceros agrestis HOM05D004911 ORTHO05D005930 1.5e-17 94.4 144 38.9
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 1.9e-17 94.0 138 39.1
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 1.9e-17 94.0 139 42.4
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 1.9e-17 94.0 140 43.6
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.9e-17 94.0 140 43.6
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.9e-17 94.0 140 43.6
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 1.9e-17 94.0 146 34.2
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 2.5e-17 93.6 150 40.7
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 2.5e-17 93.6 133 40.6
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 3.2e-17 93.2 140 42.9
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 4.2e-17 92.8 140 43.6
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 7.2e-17 92.0 140 39.3
CiPaw.05G166500 Carya illinoinensis HOM05D004911 ORTHO05D005930 7.2e-17 92.0 139 39.6
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 9.4e-17 91.7 140 42.1
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 9.4e-17 91.7 140 42.1
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 9.4e-17 91.7 139 38.8
SEGI_15793 Sequoiadendron giganteum HOM05D002537 ORTHO05D005930 1.2e-16 91.3 62 69.4
SEGI_29256 Sequoiadendron giganteum HOM05D000070 ORTHO05D000722 1.2e-16 91.3 97 55.7
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 1.6e-16 90.9 138 42.8
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 2.1e-16 90.5 135 37.8
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 2.7e-16 90.1 146 42.5
SEGI_19401 Sequoiadendron giganteum HOM05D005361 ORTHO05D006518 2.7e-16 90.1 69 66.7
QL03p043434 Quercus lobata HOM05D004911 ORTHO05D005930 1.0e-15 88.2 140 45.0
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 1.0e-15 88.2 145 37.9
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 1.0e-15 88.2 145 37.2
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 1.0e-15 88.2 145 37.2
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 2.3e-15 87.0 139 38.1
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 3.0e-15 86.7 146 37.7
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 5.2e-15 85.9 140 40.7
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 1.2e-14 84.7 152 34.2
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 1.2e-14 84.7 147 37.4
SEGI_15899 Sequoiadendron giganteum HOM05D002537 ORTHO05D002751 1.2e-14 84.7 61 63.9
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 1.5e-14 84.3 148 37.2
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 4.4e-14 82.8 143 35.0
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 4.4e-14 82.8 143 35.0
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 4.4e-14 82.8 140 35.0
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 7.5e-14 82.0 147 40.8
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 9.8e-14 81.6 148 39.2
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 1.3e-13 81.3 143 35.7
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 1.3e-13 81.3 143 35.7
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 1.3e-13 81.3 146 36.3
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 2.2e-13 80.5 138 35.5
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 2.2e-13 80.5 137 39.4
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 3.7e-13 79.7 137 36.5
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 6.3e-13 79.0 138 36.2
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 6.3e-13 79.0 152 34.2
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 1.1e-12 78.2 138 34.8
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 1.8e-12 77.4 136 38.2
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 3.1e-12 76.6 146 34.2
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 4.1e-12 76.3 139 36.0
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 5.4e-12 75.9 150 39.3
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 1.6e-11 74.3 146 33.6
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 1.0e-10 71.6 139 36.0
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 1.0e-10 71.6 142 34.5
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 5.0e-10 69.3 140 33.6
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 6.5e-10 68.9 138 33.3
SEGI_06824 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 1.5e-09 67.8 62 46.8
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 1.9e-09 67.4 137 34.3
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 1.2e-08 64.7 143 32.9
SEGI_10314 Sequoiadendron giganteum HOM05D000555 ORTHO05D005930 2.7e-08 63.5 32 87.5
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 4.7e-08 62.8 132 34.1
SEGI_31863 Sequoiadendron giganteum HOM05D001434 ORTHO05D005930 4.7e-08 62.8 44 68.2
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 6.1e-08 62.4 143 31.5
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 6.1e-08 62.4 90 36.7
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 2.3e-07 60.5 140 30.7
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 2.3e-07 60.5 100 39.0
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 3.0e-07 60.1 138 32.6
SEGI_02098 Sequoiadendron giganteum HOM05D002295 ORTHO05D002789 6.8e-07 58.9 70 40.0
Haze_13501 Corylus avellana HOM05D004911 ORTHO05D005930 1.5e-06 57.8 66 51.5
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 2.0e-06 57.4 140 28.6


User provided reference genes

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