Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29779 Sequoiadendron giganteum HOM05D005424 ORTHO05D006726 8.0e-129 463.8 234 100.0
SEGI_18929 Sequoiadendron giganteum HOM05D005424 ORTHO05D006726 4.9e-110 401.4 209 99.0
AagrBONN_evm.TU.Sc2ySwM_117.701 Anthoceros agrestis HOM05D005424 ORTHO05D006726 1.2e-28 131.0 187 48.1
Aa31LG6G7470 Aethionema arabicum HOM05D005424 ORTHO05D006726 7.2e-21 105.1 140 45.7
BcaB04g17977 Brassica carinata HOM05D005424 ORTHO05D006726 9.4e-21 104.8 129 45.7
CARHR032180 Cardamine hirsuta HOM05D005424 ORTHO05D006726 9.4e-21 104.8 129 45.7
GSVIVG01019675001 Vitis vinifera HOM05D005424 ORTHO05D006726 2.1e-20 103.6 177 44.1
Manes.01G055600 Manihot esculenta HOM05D005424 ORTHO05D006726 2.7e-20 103.2 197 39.6
Ah.07g198200 Amaranthus hybridus HOM05D005424 ORTHO05D006726 3.6e-20 102.8 200 38.0
Hund11337 Selenicereus undatus HOM05D005424 ORTHO05D006726 3.6e-20 102.8 201 42.3
AUR62007075 Chenopodium quinoa HOM05D005424 ORTHO05D006726 4.7e-20 102.4 140 44.3
AUR62019939 Chenopodium quinoa HOM05D005424 ORTHO05D006726 4.7e-20 102.4 193 37.8
Thhalv10006636m.g Eutrema salsugineum HOM05D005424 ORTHO05D006726 6.1e-20 102.1 129 47.3
Thecc.03G218200 Theobroma cacao HOM05D005424 ORTHO05D006726 8.0e-20 101.7 177 42.9
EL10Ac5g12404 Beta vulgaris HOM05D005424 ORTHO05D006726 1.0e-19 101.3 141 44.0
vmacro13840 Vaccinium macrocarpon HOM05D005424 ORTHO05D006726 1.4e-19 100.9 197 42.1
MSTRG.13701 Avicennia marina HOM05D005424 ORTHO05D006726 1.8e-19 100.5 129 46.5
Eucgr.D01670 Eucalyptus grandis HOM05D005424 ORTHO05D006726 2.3e-19 100.1 133 43.6
PSO063G2765 Papaver somniferum HOM05D005424 ORTHO05D006726 4.0e-19 99.4 197 38.6
CiPaw.11G110500 Carya illinoinensis HOM05D005424 ORTHO05D006726 5.2e-19 99.0 177 42.4
Gohir.A12G241300 Gossypium hirsutum HOM05D005424 ORTHO05D006726 6.8e-19 98.6 196 39.3
Gohir.D12G242600 Gossypium hirsutum HOM05D005424 ORTHO05D006726 6.8e-19 98.6 177 41.2
Gorai.008G259800 Gossypium raimondii HOM05D005424 ORTHO05D006726 6.8e-19 98.6 177 41.2
Rhsim07G0076500 Rhododendron simsii HOM05D005424 ORTHO05D006726 6.8e-19 98.6 197 39.6
CSS0028831 Camellia sinensis var. sinensis HOM05D005424 ORTHO05D006726 8.8e-19 98.2 129 45.0
Cpa.g.sc37.92 Carica papaya HOM05D005424 ORTHO05D006726 8.8e-19 98.2 177 42.4
Cfa011902 Carpinus fangiana HOM05D005424 ORTHO05D006726 1.5e-18 97.4 177 41.8
Nitab4.5_0003419g0090 Nicotiana tabacum HOM05D005424 ORTHO05D006726 1.5e-18 97.4 197 38.1
CANSAT21G2321 Cannabis sativa HOM05D005424 ORTHO05D006726 2.0e-18 97.1 137 45.3
Dinv12891 Davidia involucrata HOM05D005424 ORTHO05D006726 2.0e-18 97.1 177 40.1
TAR636G1325 Trochodendron aralioides HOM05D005424 ORTHO05D006726 2.0e-18 97.1 203 37.9
CAN.G567.102 Capsicum annuum HOM05D005424 ORTHO05D006726 2.6e-18 96.7 138 42.0
COL.COLO4_10822 Corchorus olitorius HOM05D005424 ORTHO05D006726 2.6e-18 96.7 177 41.2
Nitab4.5_0002520g0100 Nicotiana tabacum HOM05D005424 ORTHO05D006726 2.6e-18 96.7 178 39.9
Atru.chr9.1859 Acer truncatum HOM05D005424 ORTHO05D006726 4.4e-18 95.9 137 44.5
Ca_09953_v3 Cicer arietinum L. HOM05D005424 ORTHO05D006726 4.4e-18 95.9 177 40.7
Peaxi162Scf00074g00151 Petunia axillaris HOM05D005424 ORTHO05D006726 4.4e-18 95.9 142 43.7
TWI81G0285 Tripterygium wilfordii HOM05D005424 ORTHO05D006726 4.4e-18 95.9 196 40.3
PGR031G0320 Punica granatum HOM05D005424 ORTHO05D006726 5.7e-18 95.5 133 46.6
Sc01g0010800 Simmondsia chinensis HOM05D005424 ORTHO05D006726 5.7e-18 95.5 141 44.7
Aqoxy7G00007 Aquilegia oxysepala HOM05D005424 ORTHO05D006726 7.5e-18 95.1 197 38.6
Glyma.20G217700 Glycine max HOM05D005424 ORTHO05D006726 7.5e-18 95.1 196 40.3
Lj5g0003487 Lotus japonicus HOM05D005424 ORTHO05D006726 7.5e-18 95.1 177 41.2
Sabra11G0148200 Salix brachista HOM05D005424 ORTHO05D006726 9.8e-18 94.7 202 39.1
VMungo0720G0206 Vigna mungo HOM05D005424 ORTHO05D006726 9.8e-18 94.7 177 40.7
Glyma.10G172500 Glycine max HOM05D005424 ORTHO05D006726 1.7e-17 94.0 177 41.2
HanXRQChr07g0192271 Helianthus annuus HOM05D005424 ORTHO05D006726 1.7e-17 94.0 197 40.1
Aqoxy8s003 Aquilegia oxysepala HOM05D005424 ORTHO05D006726 2.2e-17 93.6 197 38.6
Migut.E00727 Erythranthe guttata HOM05D005424 ORTHO05D006726 2.2e-17 93.6 129 41.9
PSO782G1858 Papaver somniferum HOM05D005424 ORTHO05D006726 2.2e-17 93.6 197 38.1
arahy.Tifrunner.gnm1.ann1.BAML4E Arachis hypogaea HOM05D005424 ORTHO05D006726 2.8e-17 93.2 177 41.8
Dinv18754 Davidia involucrata HOM05D005424 ORTHO05D006726 2.8e-17 93.2 177 39.0
Sopen08g031500 Solanum pennellii HOM05D005424 ORTHO05D006726 2.8e-17 93.2 184 37.0
AT1G32810 Arabidopsis thaliana HOM05D005424 ORTHO05D006726 3.7e-17 92.8 129 45.0
Prupe.5G132500 Prunus persica HOM05D005424 ORTHO05D006726 3.7e-17 92.8 177 40.7
Sabra16G0303000 Salix brachista HOM05D005424 ORTHO05D006726 3.7e-17 92.8 141 44.0
Ciclev10018587m.g Citrus clementina HOM05D005424 ORTHO05D006726 4.8e-17 92.4 196 37.2
QL02p027371 Quercus lobata HOM05D005424 ORTHO05D006726 4.8e-17 92.4 177 40.7
Duzib068G1314 Durio zibethinus HOM05D005424 ORTHO05D006726 6.3e-17 92.0 178 41.0
MD06G1121800 Malus domestica HOM05D005424 ORTHO05D006726 6.3e-17 92.0 198 38.9
Solyc08g083290.4 Solanum lycopersicum HOM05D005424 ORTHO05D006726 6.3e-17 92.0 184 37.0
Lsat_1_v5_gn_6_11441 Lactuca sativa HOM05D005424 ORTHO05D006726 8.3e-17 91.7 128 45.3
BraA08t32921Z Brassica rapa HOM05D005424 ORTHO05D006726 1.4e-16 90.9 141 39.0
Cc08_g16940 Coffea canephora HOM05D005424 ORTHO05D006726 1.4e-16 90.9 177 39.0
Potri.001G448900 Populus trichocarpa HOM05D005424 ORTHO05D006726 1.4e-16 90.9 202 37.1
THA.LOC104813063 Tarenaya hassleriana HOM05D005424 ORTHO05D006726 1.4e-16 90.9 201 36.8
Lalb_Chr21g0311601 Lupinus albus HOM05D005424 ORTHO05D006726 1.8e-16 90.5 203 39.4
MBI12_g14812_MAGBIO Magnolia biondii HOM05D005424 ORTHO05D006726 1.8e-16 90.5 198 37.4
ClCG08G001970 Citrullus lanatus HOM05D005424 ORTHO05D006726 3.1e-16 89.7 141 44.0
Lalb_Chr21g0311581 Lupinus albus HOM05D005424 ORTHO05D006726 3.1e-16 89.7 182 41.8
Psat6g052720 Pisum sativum HOM05D005424 ORTHO05D006726 3.1e-16 89.7 176 39.8
THA.LOC104806458 Tarenaya hassleriana HOM05D005424 ORTHO05D006726 3.1e-16 89.7 129 41.1
Sp1g28160 Schrenkiella parvula HOM05D005424 ORTHO05D006726 4.1e-16 89.4 129 43.4
Potri.011G152600 Populus trichocarpa HOM05D005424 ORTHO05D006726 7.0e-16 88.6 204 37.7
TAR374G0493 Trochodendron aralioides HOM05D005424 ORTHO05D006726 7.0e-16 88.6 204 37.7
HPP92_001577 Vanilla planifolia HOM05D005424 ORTHO05D006726 7.0e-16 88.6 93 46.2
Duzib205G0106 Durio zibethinus HOM05D005424 ORTHO05D006726 9.1e-16 88.2 177 40.1
FAN08G3416 Fragaria x ananassa HOM05D005424 ORTHO05D006726 9.1e-16 88.2 192 39.6
Nn7g38300 Nelumbo nucifera HOM05D005424 ORTHO05D006726 9.1e-16 88.2 205 36.1
AL1G47110 Arabidopsis lyrata HOM05D005424 ORTHO05D006726 2.0e-15 87.0 177 36.7
Ah.12g053330 Amaranthus hybridus HOM05D001091 ORTHO05D001020 2.7e-15 86.7 64 57.8
SGA_v2.0_scaffold88G27243 Striga asiatica HOM05D005424 ORTHO05D006726 2.7e-15 86.7 122 44.3
ECA233G6131 Erigeron canadensis HOM05D005424 ORTHO05D006726 3.5e-15 86.3 132 43.2
FvH4_5g10620 Fragaria vesca HOM05D005424 ORTHO05D006726 3.5e-15 86.3 178 40.4
BcaC07g37610 Brassica carinata HOM05D005424 ORTHO05D006726 4.5e-15 85.9 141 40.4
CsaV3_6G002490 Cucumis sativus L. HOM05D005424 ORTHO05D006726 4.5e-15 85.9 191 38.2
FAN18G4434 Fragaria x ananassa HOM05D005424 ORTHO05D006726 4.5e-15 85.9 178 39.3
A08p09200 Brassica napus HOM05D005424 ORTHO05D006726 5.9e-15 85.5 140 40.7
BolC8t47971H Brassica oleracea HOM05D005424 ORTHO05D006726 5.9e-15 85.5 140 40.7
MELO3C025037.2 Cucumis melo HOM05D005424 ORTHO05D006726 5.9e-15 85.5 177 39.5
FAN13G2865 Fragaria x ananassa HOM05D005424 ORTHO05D006726 1.0e-14 84.7 178 39.9
Lj2A154T41 Lonicera japonica HOM05D005424 ORTHO05D006726 2.3e-14 83.6 85 54.1
Carub.0001s3113 Capsella rubella HOM05D005424 ORTHO05D006726 3.8e-14 82.8 129 41.9
DCAR_019998 Daucus carota HOM05D005424 ORTHO05D006726 5.0e-14 82.4 146 38.4
Phvul.L004801 Phaseolus vulgaris HOM05D005424 ORTHO05D006726 5.0e-14 82.4 177 38.4
TPR.G34808 Trifolium pratense HOM05D005424 ORTHO05D006726 5.0e-14 82.4 192 38.0
Medtr1g077940 Medicago truncatula HOM05D005424 ORTHO05D006726 1.1e-13 81.3 177 38.4
RcHm_v2.0_Chr7g0187521 Rosa chinensis HOM05D005424 ORTHO05D006726 1.1e-13 81.3 168 40.5
Oeu038526.1 Olea europaea HOM05D000700 ORTHO05D000397 4.2e-13 79.3 73 56.2
DCAR_009582 Daucus carota HOM05D005424 ORTHO05D006726 1.2e-12 77.8 146 37.0
SHI06919 Sapria himalayana HOM05D005424 ORTHO05D006726 1.2e-12 77.8 41 78.0
Mapoly0057s0069 Marchantia polymorpha HOM05D005424 ORTHO05D006726 1.6e-12 77.4 210 36.7
unitig_699.g19549 Utricularia gibba HOM05D005424 ORTHO05D006726 3.6e-12 76.3 144 41.0
Oeu010728.1 Olea europaea HOM05D005424 ORTHO05D006726 6.1e-12 75.5 41 78.0
Sed0006250 Sechium edule HOM05D005424 ORTHO05D006726 8.0e-12 75.1 41 78.0
CDE11G1187 Ceratophyllum demersum HOM05D005424 ORTHO05D006726 2.0e-07 60.5 177 29.9


User provided reference genes

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