Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29718 Sequoiadendron giganteum HOM05D004019 ORTHO05D005136 3.0e-145 518.5 258 100.0
ATR1120G055 Amborella trichopoda HOM05D004019 ORTHO05D005136 2.1e-77 293.1 158 88.0
SGA_v2.0_scaffold280G46835 Striga asiatica HOM05D004019 ORTHO05D005136 7.8e-77 291.2 159 87.4
Solyc08g068010.2 Solanum lycopersicum HOM05D004019 ORTHO05D005136 3.9e-76 288.9 158 86.7
Sopen08g021930 Solanum pennellii HOM05D004019 ORTHO05D005136 3.9e-76 288.9 158 86.7
Nitab4.5_0000250g0090 Nicotiana tabacum HOM05D004019 ORTHO05D005136 6.6e-76 288.1 158 86.1
Nitab4.5_0002393g0010 Nicotiana tabacum HOM05D004019 ORTHO05D005136 6.6e-76 288.1 158 86.1
MSTRG.25887 Avicennia marina HOM05D004019 ORTHO05D005136 1.1e-75 287.3 158 85.4
Migut.A00257 Erythranthe guttata HOM05D004019 ORTHO05D005136 1.1e-75 287.3 158 87.3
Dinv30236 Davidia involucrata HOM05D004019 ORTHO05D005136 1.5e-75 287.0 158 86.1
PGR031G1071 Punica granatum HOM05D004019 ORTHO05D005136 1.9e-75 286.6 158 85.4
Dinv14207 Davidia involucrata HOM05D004019 ORTHO05D005136 2.5e-75 286.2 158 85.4
Thecc.09G037700 Theobroma cacao HOM05D004019 ORTHO05D005136 3.3e-75 285.8 158 85.4
vmacro11105 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 3.3e-75 285.8 161 83.2
FvH4_2g30330 Fragaria vesca HOM05D004019 ORTHO05D005136 9.6e-75 284.3 158 84.2
Gohir.A05G049350 Gossypium hirsutum HOM05D004019 ORTHO05D005136 1.6e-74 283.5 158 84.2
QL12p030977 Quercus lobata HOM05D004019 ORTHO05D005136 1.6e-74 283.5 158 84.8
CiPaw.07G216600 Carya illinoinensis HOM05D004019 ORTHO05D005136 2.1e-74 283.1 158 84.2
GSVIVG01035749001 Vitis vinifera HOM05D004019 ORTHO05D005136 2.1e-74 283.1 158 84.2
Aqoxy7G01749 Aquilegia oxysepala HOM05D004019 ORTHO05D005136 2.8e-74 282.7 158 84.8
Ciclev10007225m.g Citrus clementina HOM05D004019 ORTHO05D005136 2.8e-74 282.7 158 82.9
FAN20G1524 Fragaria x ananassa HOM05D004019 ORTHO05D005136 2.8e-74 282.7 158 83.5
Glyma.06G074700 Glycine max HOM05D004019 ORTHO05D005136 2.8e-74 282.7 158 84.2
Phvul.009G099400 Phaseolus vulgaris HOM05D004019 ORTHO05D005136 2.8e-74 282.7 158 84.2
RcHm_v2.0_Chr6g0312581 Rosa chinensis HOM05D004019 ORTHO05D005136 2.8e-74 282.7 158 83.5
VMungo1309G1295 Vigna mungo HOM05D004019 ORTHO05D005136 2.8e-74 282.7 158 84.2
arahy.Tifrunner.gnm1.ann1.P4KF2E Arachis hypogaea HOM05D004019 ORTHO05D005136 3.6e-74 282.3 158 83.5
Ca_15687_v3 Cicer arietinum L. HOM05D004019 ORTHO05D005136 3.6e-74 282.3 158 84.2
COL.COLO4_18737 Corchorus olitorius HOM05D004019 ORTHO05D005136 3.6e-74 282.3 158 84.2
MD15G1113500 Malus domestica HOM05D004019 ORTHO05D005136 4.8e-74 282.0 158 83.5
Nn8g39221 Nelumbo nucifera HOM05D004019 ORTHO05D005136 4.8e-74 282.0 158 84.2
Prupe.1G464500 Prunus persica HOM05D004019 ORTHO05D005136 4.8e-74 282.0 158 83.5
arahy.Tifrunner.gnm1.ann1.WYF2AC Arachis hypogaea HOM05D004019 ORTHO05D005136 6.2e-74 281.6 158 82.9
TWI63G0705 Tripterygium wilfordii HOM05D004019 ORTHO05D005136 6.2e-74 281.6 158 83.5
Gohir.D05G051300 Gossypium hirsutum HOM05D004019 ORTHO05D005136 1.1e-73 280.8 158 83.5
Gorai.009G053000 Gossypium raimondii HOM05D004019 ORTHO05D005136 1.1e-73 280.8 158 83.5
Rhsim02G0185100 Rhododendron simsii HOM05D004019 ORTHO05D005136 1.4e-73 280.4 158 83.5
Lj8C607G10 Lonicera japonica HOM05D004019 ORTHO05D005136 1.8e-73 280.0 158 82.9
Lj1g0020850 Lotus japonicus HOM05D004019 ORTHO05D005136 1.8e-73 280.0 158 82.9
CSS0034867 Camellia sinensis var. sinensis HOM05D004019 ORTHO05D005136 2.4e-73 279.6 158 83.5
Potri.006G244900 Populus trichocarpa HOM05D004019 ORTHO05D005136 2.4e-73 279.6 158 83.5
TAR624G1332 Trochodendron aralioides HOM05D004019 ORTHO05D005136 2.4e-73 279.6 158 83.5
Lsat_1_v5_gn_3_27801 Lactuca sativa HOM05D004019 ORTHO05D005136 4.0e-73 278.9 158 82.9
Medtr3g108360 Medicago truncatula HOM05D004019 ORTHO05D005136 4.0e-73 278.9 158 82.3
Lalb_Chr11g0064021 Lupinus albus HOM05D004019 ORTHO05D005136 5.3e-73 278.5 158 82.3
CsaV3_3G046830 Cucumis sativus L. HOM05D004019 ORTHO05D005136 1.2e-72 277.3 158 82.3
Psat5g025600 Pisum sativum HOM05D004019 ORTHO05D005136 1.2e-72 277.3 158 82.3
Atru.chr7.2305 Acer truncatum HOM05D004019 ORTHO05D005136 1.5e-72 276.9 158 82.9
Actinidia13300 Actinidia chinensis HOM05D004019 ORTHO05D005136 2.0e-72 276.6 158 81.6
Aa31LG5G9950 Aethionema arabicum HOM05D004019 ORTHO05D005136 2.0e-72 276.6 158 82.3
CANSAT25G1365 Cannabis sativa HOM05D004019 ORTHO05D005136 2.6e-72 276.2 158 81.6
CANSAT56G4370 Cannabis sativa HOM05D004019 ORTHO05D005136 2.6e-72 276.2 158 81.6
FAN24G2881 Fragaria x ananassa HOM05D004019 ORTHO05D005136 3.4e-72 275.8 169 78.7
Sabra06G0191800 Salix brachista HOM05D004019 ORTHO05D005136 3.4e-72 275.8 158 82.9
Eucgr.C01572 Eucalyptus grandis HOM05D004019 ORTHO05D005136 5.8e-72 275.0 158 82.3
Thhalv10000005m.g Eutrema salsugineum HOM05D004019 ORTHO05D005136 5.8e-72 275.0 158 81.6
ECA246G1280 Erigeron canadensis HOM05D004019 ORTHO05D005136 9.9e-72 274.2 158 80.4
HanXRQChr17g0539391 Helianthus annuus HOM05D004019 ORTHO05D005136 9.9e-72 274.2 158 81.6
THA.LOC104803772 Tarenaya hassleriana HOM05D004019 ORTHO05D005136 1.3e-71 273.9 158 82.3
unitig_747.g21875 Utricularia gibba HOM05D004019 ORTHO05D005136 1.7e-71 273.5 158 79.1
Cc08_g08140 Coffea canephora HOM05D004019 ORTHO05D005136 3.8e-71 272.3 158 82.9
Pp3c19_2530 Physcomitrium patens HOM05D004019 ORTHO05D005136 4.9e-71 271.9 157 81.5
Sp4g05330 Schrenkiella parvula HOM05D004019 ORTHO05D005136 4.9e-71 271.9 158 80.4
Ah.12g060330 Amaranthus hybridus HOM05D004019 ORTHO05D005136 8.4e-71 271.2 158 79.7
AT2G25730 Arabidopsis thaliana HOM05D004019 ORTHO05D005136 8.4e-71 271.2 158 79.7
Carub.0004s0550 Capsella rubella HOM05D004019 ORTHO05D005136 8.4e-71 271.2 158 81.0
Sed0026885 Sechium edule HOM05D004019 ORTHO05D005136 8.4e-71 271.2 158 80.4
A03p27040 Brassica napus HOM05D004019 ORTHO05D005136 1.9e-70 270.0 158 81.0
BraA03t11915Z Brassica rapa HOM05D004019 ORTHO05D005136 1.9e-70 270.0 158 81.0
AL4G17350 Arabidopsis lyrata HOM05D004019 ORTHO05D005136 2.4e-70 269.6 158 79.7
C03p32450 Brassica napus HOM05D004019 ORTHO05D005136 2.1e-69 266.5 158 80.4
BolC3t15586H Brassica oleracea HOM05D004019 ORTHO05D005136 2.1e-69 266.5 158 80.4
EL10Ac2g02527 Beta vulgaris HOM05D004019 ORTHO05D005136 2.7e-69 266.2 158 78.5
PSO063G5962 Papaver somniferum HOM05D004019 ORTHO05D005136 3.5e-69 265.8 158 79.1
PSO782G0289 Papaver somniferum HOM05D004019 ORTHO05D005136 3.5e-69 265.8 158 79.1
AUR62024824 Chenopodium quinoa HOM05D004019 ORTHO05D005136 2.3e-68 263.1 158 76.6
CARHR115530 Cardamine hirsuta HOM05D004019 ORTHO05D005136 6.6e-68 261.5 158 78.5
AUR62032391 Chenopodium quinoa HOM05D004019 ORTHO05D005136 8.7e-68 261.2 158 75.9
Sc09g0008920 Simmondsia chinensis HOM05D004019 ORTHO05D005136 2.5e-67 259.6 158 75.9
CDE10G0547 Ceratophyllum demersum HOM05D004019 ORTHO05D005136 3.3e-67 259.2 158 75.3
TPR.G12417 Trifolium pratense HOM05D004019 ORTHO05D005136 1.6e-66 256.9 158 74.7
Os01g0593000 Oryza sativa ssp. japonica HOM05D004019 ORTHO05D005136 2.1e-66 256.5 158 75.3
SMO172G0089 Selaginella moellendorffii HOM05D004019 ORTHO05D005136 6.2e-66 255.0 158 72.8
MELO3C003655.2 Cucumis melo HOM05D004019 ORTHO05D005136 2.1e-61 240.0 227 56.8
Mapoly0049s0060 Marchantia polymorpha HOM05D004019 ORTHO05D005136 1.0e-60 237.7 158 71.5
AagrBONN_evm.TU.Sc2ySwM_340.130 Anthoceros agrestis HOM05D004019 ORTHO05D005136 3.3e-59 232.6 158 66.5
DCAR_006257 Daucus carota HOM05D004019 ORTHO05D005136 3.3e-59 232.6 129 86.8
Peaxi162Scf00105g00818 Petunia axillaris HOM05D004019 ORTHO05D005136 8.1e-58 228.0 186 65.6
Oeu063261.5 Olea europaea HOM05D004019 ORTHO05D005136 1.1e-57 227.6 132 82.6
CBR_g31401 Chara braunii HOM05D004019 ORTHO05D005136 3.4e-56 222.6 159 66.0
Cpa.g.sc205.26 Carica papaya HOM05D004019 ORTHO05D005136 8.4e-55 218.0 174 64.9
vmacro08818 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 1.9e-54 216.9 126 79.4
Hma1.2p1_0140F.1_g063800 Hydrangea macrophylla HOM05D004019 ORTHO05D005136 8.8e-36 154.8 116 67.2
Haze_21651 Corylus avellana HOM05D004019 ORTHO05D005136 5.5e-14 82.4 47 83.0
SEGI_37625 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.1e-13 80.5 109 51.4
SEGI_19865 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 4.5e-08 62.8 101 42.6
SEGI_31624 Sequoiadendron giganteum HOM05D004019 ORTHO05D384271 5.9e-08 62.4 81 48.1
SEGI_09032 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.7e-07 60.8 139 32.4


User provided reference genes

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