Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.8e-134 482.6 256 100.0
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.1e-102 377.1 251 83.7
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 2.0e-88 329.7 252 71.4
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 3.4e-88 328.9 252 72.2
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 4.9e-87 325.1 252 69.8
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.9e-87 325.1 252 69.8
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 4.9e-87 325.1 252 69.4
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 6.3e-87 324.7 252 69.8
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 8.3e-87 324.3 252 69.4
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.4e-86 323.6 252 69.4
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 1.4e-86 323.6 252 69.4
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.4e-86 322.8 252 69.0
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 3.1e-86 322.4 252 69.0
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 4.1e-86 322.0 253 70.0
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 4.1e-86 322.0 252 68.7
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 1.2e-85 320.5 252 69.4
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 1.6e-85 320.1 252 69.4
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 2.0e-85 319.7 252 68.3
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 2.7e-85 319.3 252 68.7
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 2.7e-85 319.3 252 68.7
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 2.7e-85 319.3 252 68.7
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 2.7e-85 319.3 251 69.7
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 2.7e-85 319.3 252 68.7
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 2.7e-85 319.3 252 69.0
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 3.5e-85 318.9 252 67.9
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 4.5e-85 318.5 252 68.7
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 4.5e-85 318.5 252 69.4
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 4.5e-85 318.5 253 68.8
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 5.9e-85 318.2 253 68.0
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 5.9e-85 318.2 252 68.7
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 1.0e-84 317.4 253 68.4
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 1.0e-84 317.4 252 69.0
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 1.0e-84 317.4 252 67.1
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 1.0e-84 317.4 252 67.9
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.0e-84 317.4 252 67.9
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 1.3e-84 317.0 252 68.3
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 1.3e-84 317.0 252 68.3
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.3e-84 316.2 252 67.9
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 2.3e-84 316.2 252 67.5
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 2.3e-84 316.2 252 69.8
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 2.9e-84 315.8 252 66.7
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 2.9e-84 315.8 252 68.7
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 2.9e-84 315.8 252 67.5
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 5.0e-84 315.1 252 67.1
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 5.0e-84 315.1 249 68.3
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 5.0e-84 315.1 252 67.1
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 6.6e-84 314.7 252 67.9
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 8.6e-84 314.3 252 66.7
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 1.1e-83 313.9 252 69.0
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 1.5e-83 313.5 252 66.7
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 1.5e-83 313.5 252 66.7
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 1.5e-83 313.5 252 67.1
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 1.5e-83 313.5 254 66.9
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 1.5e-83 313.5 252 66.7
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 1.9e-83 313.2 252 66.7
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 1.9e-83 313.2 252 67.5
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 3.3e-83 312.4 254 66.5
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 3.3e-83 312.4 252 66.7
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 3.3e-83 312.4 252 67.5
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 4.3e-83 312.0 254 66.5
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 4.3e-83 312.0 252 67.1
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 7.3e-83 311.2 252 66.7
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 7.3e-83 311.2 252 66.7
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 7.3e-83 311.2 252 67.5
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 7.3e-83 311.2 252 66.3
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 9.5e-83 310.8 252 67.5
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.2e-82 310.5 252 66.3
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.2e-82 310.5 252 66.3
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 1.6e-82 310.1 256 65.6
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 1.6e-82 310.1 252 67.1
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 1.6e-82 310.1 252 66.7
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 1.6e-82 310.1 252 65.9
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 1.6e-82 310.1 252 67.5
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 2.1e-82 309.7 252 66.7
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 2.1e-82 309.7 252 67.1
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 3.6e-82 308.9 252 65.9
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 3.6e-82 308.9 252 65.9
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 4.7e-82 308.5 252 65.9
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 8.0e-82 307.8 252 65.5
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 8.0e-82 307.8 252 65.9
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 8.0e-82 307.8 252 65.9
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 1.0e-81 307.4 251 66.5
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 1.8e-81 306.6 252 66.7
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 3.0e-81 305.8 252 65.9
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 3.0e-81 305.8 252 65.5
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 3.0e-81 305.8 252 67.9
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 4.0e-81 305.4 252 64.7
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 4.0e-81 305.4 252 67.5
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 6.8e-81 304.7 256 64.5
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 8.9e-81 304.3 252 67.5
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 1.2e-80 303.9 252 64.7
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 1.2e-80 303.9 252 65.5
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 1.5e-80 303.5 252 65.5
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 1.5e-80 303.5 252 65.5
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 1.5e-80 303.5 252 63.9
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 2.0e-80 303.1 252 65.1
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 3.4e-80 302.4 252 65.1
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 4.4e-80 302.0 252 64.7
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 4.4e-80 302.0 252 67.1
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 7.5e-80 301.2 252 66.7
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.1e-78 297.4 256 62.9
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 1.1e-78 297.4 248 66.5
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 1.4e-78 297.0 252 64.7
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 7.0e-78 294.7 254 61.0
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 6.0e-77 291.6 256 65.2
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 1.3e-76 290.4 252 61.1
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 1.7e-76 290.0 183 80.3
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.0e-76 289.3 251 61.4
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 5.0e-76 288.5 206 74.3
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.8e-73 280.0 256 59.8
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.5e-72 276.9 256 58.6
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 2.6e-72 276.2 252 60.3
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 2.2e-71 273.1 235 65.1
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 2.2e-71 273.1 252 57.9
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.9e-70 270.0 256 56.2
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 2.8e-66 256.1 252 58.3
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 6.6e-60 235.0 179 67.0
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 5.2e-57 225.3 150 77.3
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 6.6e-52 208.4 150 74.0
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 8.1e-50 201.4 254 44.1
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 4.9e-39 165.6 246 36.6
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.6e-37 160.6 152 59.9
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 6.0e-37 158.7 252 42.1
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 1.3e-34 151.0 244 35.7
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.6e-32 143.3 238 36.6
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 1.7e-31 140.6 95 73.7
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.0e-28 131.3 96 74.0
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 4.8e-26 122.5 73 82.2
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 8.2e-26 121.7 179 37.4
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.1e-25 121.3 252 37.7
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.7e-23 114.0 71 78.9
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 3.7e-18 96.3 96 53.1
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 1.4e-14 84.3 263 28.1
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 2.7e-13 80.1 129 41.1
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 2.6e-08 63.5 42 76.2


User provided reference genes

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