Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29488 Sequoiadendron giganteum HOM05D005972 ORTHO05D007548 3.5e-219 764.6 378 100.0
ATR0594G009 Amborella trichopoda HOM05D005972 ORTHO05D007548 7.9e-118 427.9 375 55.5
CDE04G1870 Ceratophyllum demersum HOM05D005972 ORTHO05D007548 2.4e-114 416.4 376 53.2
ATR0174G007 Amborella trichopoda HOM05D005972 ORTHO05D007548 9.9e-113 411.0 383 53.8
Lj9A317T77 Lonicera japonica HOM05D005972 ORTHO05D007548 3.9e-109 399.1 376 51.1
CSS0039579 Camellia sinensis var. sinensis HOM05D005972 ORTHO05D007548 2.4e-106 389.8 377 49.9
Cfa019136 Carpinus fangiana HOM05D005972 ORTHO05D007548 2.4e-106 389.8 376 49.7
Eucgr.H00021 Eucalyptus grandis HOM05D005972 ORTHO05D007548 5.3e-106 388.7 377 50.7
Rhsim05G0111400 Rhododendron simsii HOM05D005972 ORTHO05D007548 3.4e-105 386.0 375 48.8
Nitab4.5_0000718g0290 Nicotiana tabacum HOM05D005972 ORTHO05D007548 4.5e-105 385.6 376 48.9
CiPaw.11G025800 Carya illinoinensis HOM05D005972 ORTHO05D007548 2.9e-104 382.9 376 48.1
Cpa.g.sc36.20 Carica papaya HOM05D005972 ORTHO05D007548 4.9e-104 382.1 377 48.5
MBI03_g03956_MAGBIO Magnolia biondii HOM05D005972 ORTHO05D007548 4.9e-104 382.1 380 50.8
Manes.16G061300 Manihot esculenta HOM05D005972 ORTHO05D007548 4.9e-104 382.1 377 46.4
Thecc.10G118600 Theobroma cacao HOM05D005972 ORTHO05D007548 4.9e-104 382.1 381 50.1
MD13G1062400 Malus domestica HOM05D005972 ORTHO05D007548 2.5e-103 379.8 376 50.0
Nitab4.5_0012898g0010 Nicotiana tabacum HOM05D005972 ORTHO05D007548 3.2e-103 379.4 376 48.7
Duzib106G0263 Durio zibethinus HOM05D005972 ORTHO05D007548 9.3e-103 377.9 377 48.0
PGR142G0064 Punica granatum HOM05D005972 ORTHO05D007548 9.3e-103 377.9 377 49.9
Thecc.04G023500 Theobroma cacao HOM05D005972 ORTHO05D007548 1.2e-102 377.5 377 48.5
COL.COLO4_27930 Corchorus olitorius HOM05D005972 ORTHO05D007548 2.1e-102 376.7 379 48.5
CAN.G1513.3 Capsicum annuum HOM05D005972 ORTHO05D007548 3.5e-102 375.9 377 48.5
Dinv24228 Davidia involucrata HOM05D001691 ORTHO05D007548 3.5e-102 375.9 372 48.9
Sopen11g002990 Solanum pennellii HOM05D005972 ORTHO05D007548 4.6e-102 375.6 376 48.7
Oeu017286.1 Olea europaea HOM05D005972 ORTHO05D007548 6.0e-102 375.2 377 48.5
PSO782G4197 Papaver somniferum HOM05D005972 ORTHO05D007548 1.0e-101 374.4 375 47.7
Solyc11g007070.2 Solanum lycopersicum HOM05D005972 ORTHO05D007548 1.0e-101 374.4 376 48.7
Ciclev10031864m.g Citrus clementina HOM05D005972 ORTHO05D007548 2.3e-101 373.2 370 48.6
THA.LOC104808523 Tarenaya hassleriana HOM05D005972 ORTHO05D007548 2.3e-101 373.2 376 46.8
GSVIVG01020853001 Vitis vinifera HOM05D005972 ORTHO05D007548 3.9e-101 372.5 375 47.7
PSO063G2120 Papaver somniferum HOM05D005972 ORTHO05D007548 5.1e-101 372.1 375 47.5
Gohir.D06G178100 Gossypium hirsutum HOM05D005972 ORTHO05D007548 8.7e-101 371.3 377 47.5
Gorai.N007100 Gossypium raimondii HOM05D005972 ORTHO05D007548 1.5e-100 370.5 377 47.5
Potri.001G222400 Populus trichocarpa HOM05D005972 ORTHO05D007548 1.5e-100 370.5 377 47.5
Sc22g0000350 Simmondsia chinensis HOM05D005972 ORTHO05D007548 2.5e-100 369.8 377 48.5
Actinidia28072 Actinidia chinensis HOM05D005972 ORTHO05D007548 5.7e-100 368.6 376 48.7
Mapoly0188s0014 Marchantia polymorpha HOM05D005972 ORTHO05D007548 1.3e-99 367.5 370 49.5
Gohir.A06G170300 Gossypium hirsutum HOM05D005972 ORTHO05D007548 1.6e-99 367.1 377 47.5
Prupe.1G287600 Prunus persica HOM05D005972 ORTHO05D007548 1.6e-99 367.1 375 48.0
RcHm_v2.0_Chr4g0438261 Rosa chinensis HOM05D005972 ORTHO05D007548 2.8e-99 366.3 375 47.7
vmacro19910 Vaccinium macrocarpon HOM05D005972 ORTHO05D007548 8.2e-99 364.8 375 47.5
Atru.chr12.548 Acer truncatum HOM05D005972 ORTHO05D007548 1.1e-98 364.4 370 46.5
EL10Ac5g12767 Beta vulgaris HOM05D005972 ORTHO05D007548 2.4e-98 363.2 385 47.0
Haze_07503 Corylus avellana HOM05D005972 ORTHO05D007548 3.1e-98 362.8 376 48.1
FvH4_4g29980 Fragaria vesca HOM05D005972 ORTHO05D007548 6.9e-98 361.7 375 47.5
Lsat_1_v5_gn_7_80540 Lactuca sativa HOM05D005972 ORTHO05D007548 1.2e-97 360.9 377 45.6
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.5e-97 360.5 375 47.2
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 2.0e-97 360.1 375 47.2
TWI73G1071 Tripterygium wilfordii HOM05D005972 ORTHO05D007548 3.4e-97 359.4 377 44.6
FAN22G0246 Fragaria x ananassa HOM05D005972 ORTHO05D007548 5.9e-97 358.6 375 47.2
Aqoxy4G02449 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 1.0e-96 357.8 407 46.7
MELO3C012375.2 Cucumis melo HOM05D005972 ORTHO05D007548 5.0e-96 355.5 389 46.3
CsaV3_5G035730 Cucumis sativus L. HOM05D005972 ORTHO05D007548 6.5e-96 355.1 389 46.3
Psat0s2194g0120 Pisum sativum HOM05D005972 ORTHO05D007548 1.1e-95 354.4 375 47.7
Ah.12g057320 Amaranthus hybridus HOM05D005972 ORTHO05D007548 1.4e-95 354.0 377 44.3
QL04p050517 Quercus lobata HOM05D005972 ORTHO05D007548 1.4e-95 354.0 429 42.7
Lalb_Chr12g0208521 Lupinus albus HOM05D005972 ORTHO05D007548 1.9e-95 353.6 375 45.9
Medtr4g094305 Medicago truncatula HOM05D005972 ORTHO05D007548 1.9e-95 353.6 374 47.3
arahy.Tifrunner.gnm1.ann1.41EE5L Arachis hypogaea HOM05D005972 ORTHO05D007548 3.2e-95 352.8 375 46.7
arahy.Tifrunner.gnm1.ann1.UKM804 Arachis hypogaea HOM05D005972 ORTHO05D007548 5.5e-95 352.1 375 46.4
ClCG05G021510 Citrullus lanatus HOM05D005972 ORTHO05D007548 2.7e-94 349.7 383 46.7
MSTRG.27825 Avicennia marina HOM05D005972 ORTHO05D007548 3.6e-94 349.4 376 45.5
Ca_18332_v3 Cicer arietinum L. HOM05D005972 ORTHO05D007548 3.6e-94 349.4 373 46.9
HanXRQChr11g0337671 Helianthus annuus HOM05D005972 ORTHO05D007548 7.9e-94 348.2 377 44.6
Glyma.05G120600 Glycine max HOM05D005972 ORTHO05D007548 1.0e-93 347.8 368 46.5
BcaNung00313 Brassica carinata HOM05D005972 ORTHO05D007548 2.3e-93 346.7 377 45.6
FAN17G2742 Fragaria x ananassa HOM05D005972 ORTHO05D007548 3.0e-93 346.3 385 45.7
HPP92_021056 Vanilla planifolia HOM05D005972 ORTHO05D007548 3.0e-93 346.3 372 46.5
Sed0010539 Sechium edule HOM05D005972 ORTHO05D007548 5.1e-93 345.5 384 46.1
TPR.G31487 Trifolium pratense HOM05D005972 ORTHO05D007548 5.1e-93 345.5 375 45.9
Glyma.08G075400 Glycine max HOM05D005972 ORTHO05D007548 1.9e-92 343.6 368 46.2
Lj4g0025997 Lotus japonicus HOM05D005972 ORTHO05D007548 3.3e-92 342.8 375 45.1
Aa31LG9G2330 Aethionema arabicum HOM05D005972 ORTHO05D007548 4.3e-92 342.4 377 45.4
Thhalv10025456m.g Eutrema salsugineum HOM05D005972 ORTHO05D007548 4.3e-92 342.4 380 44.2
AL7G40820 Arabidopsis lyrata HOM05D005972 ORTHO05D007548 2.8e-91 339.7 376 44.4
A01p22560 Brassica napus HOM05D005972 ORTHO05D007548 4.8e-91 339.0 377 45.1
C01p28060 Brassica napus HOM05D005972 ORTHO05D007548 4.8e-91 339.0 377 45.1
BraA01t02169Z Brassica rapa HOM05D005972 ORTHO05D007548 1.8e-90 337.0 377 44.8
Migut.N01012 Erythranthe guttata HOM05D005972 ORTHO05D007548 1.8e-90 337.0 379 44.1
BcaB02g07844 Brassica carinata HOM05D005972 ORTHO05D007548 2.4e-90 336.7 380 44.7
Carub.0007s2708 Capsella rubella HOM05D005972 ORTHO05D007548 2.4e-90 336.7 376 44.9
AT4G15010 Arabidopsis thaliana HOM05D005972 ORTHO05D007548 3.1e-90 336.3 376 43.9
BcaC09g50180 Brassica carinata HOM05D005972 ORTHO05D007548 5.3e-90 335.5 377 44.8
BolC1t02740H Brassica oleracea HOM05D005972 ORTHO05D007548 5.3e-90 335.5 377 44.8
CARHR221700 Cardamine hirsuta HOM05D005972 ORTHO05D007548 9.1e-90 334.7 377 43.8
CANSAT80G0182 Cannabis sativa HOM05D005972 ORTHO05D007548 7.7e-89 331.6 377 44.8
Nn6g35524 Nelumbo nucifera HOM05D005972 ORTHO05D007548 2.2e-88 330.1 376 44.9
VMungo0251G2526 Vigna mungo HOM05D005972 ORTHO05D007548 2.9e-88 329.7 391 43.5
SGA_v2.0_scaffold145G36053 Striga asiatica HOM05D005972 ORTHO05D007548 3.8e-88 329.3 377 42.2
MD16G1060700 Malus domestica HOM05D005972 ORTHO05D007548 8.5e-88 328.2 368 47.3
Zm00001eb427070 Zea mays HOM05D005972 ORTHO05D007548 2.2e-83 313.5 370 44.1
Peaxi162Scf00152g01221 Petunia axillaris HOM05D005972 ORTHO05D007548 4.8e-83 312.4 376 42.0
DCAR_006139 Daucus carota HOM05D005972 ORTHO05D007548 1.8e-82 310.5 314 49.4
Phvul.002G206200 Phaseolus vulgaris HOM05D005972 ORTHO05D007548 3.1e-82 309.7 368 43.5
Pp3c15_20500 Physcomitrium patens HOM05D005972 ORTHO05D007548 1.4e-79 300.8 383 40.7
SalBow6G6672 Salvia bowleyana HOM05D005972 ORTHO05D007548 5.5e-79 298.9 424 36.8
ECA236G4176 Erigeron canadensis HOM05D005972 ORTHO05D007548 1.8e-66 257.3 267 46.4
Sabra16G0132100 Salix brachista HOM05D005972 ORTHO05D007548 6.5e-64 248.8 268 44.4
unitig_747.g21237 Utricularia gibba HOM05D005972 ORTHO05D007548 2.7e-57 226.9 407 33.4
SHI11404 Sapria himalayana HOM05D005972 ORTHO05D007548 1.3e-56 224.6 276 45.3
Cc02_g21900 Coffea canephora HOM05D005972 ORTHO05D007548 1.6e-54 217.6 188 54.8
COL.COLO4_10011 Corchorus olitorius HOM05D005972 ORTHO05D007548 5.9e-49 199.1 263 41.1
Aqoxy3G01225 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 3.2e-34 150.2 167 47.9
Cc02_g21910 Coffea canephora HOM05D005972 ORTHO05D007548 1.6e-30 137.9 135 47.4
Os04g0527500 Oryza sativa ssp. japonica HOM05D005972 ORTHO05D007548 3.4e-28 130.2 124 48.4
Sp7g13170 Schrenkiella parvula HOM05D005972 ORTHO05D007548 1.9e-26 124.4 163 39.9
SpUn0490_0010 Schrenkiella parvula HOM05D005972 ORTHO05D007548 1.9e-26 124.4 121 48.8
BcaC08g44257 Brassica carinata HOM05D005972 ORTHO05D024007 2.1e-25 120.9 131 47.3
C06p16620 Brassica napus HOM05D005972 ORTHO05D007548 2.1e-25 120.9 220 35.5
BolC6t36864H Brassica oleracea HOM05D005972 ORTHO05D007548 2.1e-25 120.9 220 35.5
A05p16900 Brassica napus HOM05D005972 ORTHO05D007548 7.8e-25 119.0 139 44.6
CBR_g51824 Chara braunii HOM05D005972 ORTHO05D007548 2.0e-20 104.4 356 26.1
HanXRQChr15g0481161 Helianthus annuus HOM05D005972 ORTHO05D007548 6.4e-19 99.4 104 47.1
CAN.G730.4 Capsicum annuum HOM05D005972 ORTHO05D007548 6.6e-16 89.4 135 40.0
BraA05t20595Z Brassica rapa HOM05D005972 ORTHO05D007548 2.5e-15 87.4 106 44.3
CAN.G730.17 Capsicum annuum HOM05D005972 ORTHO05D007548 4.7e-14 83.2 108 44.4
CSS0032497 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D007548 2.2e-11 74.3 82 47.6
SMO075G0001 Selaginella moellendorffii HOM05D000883 ORTHO05D002942 9.3e-10 68.9 123 36.6
SMO364G0305 Selaginella moellendorffii HOM05D000883 ORTHO05D002942 9.3e-10 68.9 123 36.6
SMO364G0575 Selaginella moellendorffii HOM05D000883 ORTHO05D002942 9.3e-10 68.9 123 36.6
CAN.G730.12 Capsicum annuum HOM05D005972 ORTHO05D007548 1.2e-09 68.6 61 60.7
Zm00001eb076720 Zea mays HOM05D005972 ORTHO05D007548 1.2e-09 68.6 63 55.6
A05p16910 Brassica napus HOM05D005972 ORTHO05D007548 3.5e-09 67.0 79 45.6
Pp3c18_6530 Physcomitrium patens HOM05D005972 ORTHO05D007548 2.5e-07 60.8 92 35.9
Phvul.002G280600 Phaseolus vulgaris HOM05D000177 ORTHO05D002987 1.6e-06 58.2 125 32.0
SMO364G0058 Selaginella moellendorffii HOM05D000177 ORTHO05D002987 1.6e-06 58.2 132 33.3
TWI14G1352 Tripterygium wilfordii HOM05D000177 ORTHO05D002987 1.6e-06 58.2 127 32.3
Sabra16G0119400 Salix brachista HOM05D000883 ORTHO05D002942 2.1e-06 57.8 133 35.3
arahy.Tifrunner.gnm1.ann1.D5PS1Z Arachis hypogaea HOM05D000177 ORTHO05D002987 3.6e-06 57.0 125 30.4
CAN.G730.21 Capsicum annuum HOM05D005972 ORTHO05D007548 4.8e-06 56.6 51 54.9
Potri.016G125200 Populus trichocarpa HOM05D000883 ORTHO05D002942 4.8e-06 56.6 133 33.1
Ca_16819_v3 Cicer arietinum L. HOM05D000177 ORTHO05D002987 6.2e-06 56.2 125 32.0
Glyma.05G199400 Glycine max HOM05D000177 ORTHO05D002987 6.2e-06 56.2 125 32.0
Pp3c15_17240 Physcomitrium patens HOM05D000883 ORTHO05D002942 8.1e-06 55.8 132 30.3


User provided reference genes

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