Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29439 Sequoiadendron giganteum HOM05D000730 ORTHO05D030596 4.2e-78 294.7 154 100.0
SEGI_16380 Sequoiadendron giganteum HOM05D000730 ORTHO05D000578 4.0e-44 181.8 129 81.4
SEGI_09754 Sequoiadendron giganteum HOM05D000293 ORTHO05D000180 1.9e-30 136.3 96 77.1
TAR626G1197 Trochodendron aralioides HOM05D000730 ORTHO05D000578 2.8e-21 105.9 148 51.4
SEGI_27474 Sequoiadendron giganteum HOM05D000730 ORTHO05D030596 2.4e-20 102.8 74 82.4
ATR0705G218 Amborella trichopoda HOM05D000730 ORTHO05D000578 1.3e-18 97.1 158 44.9
TAR383G0283 Trochodendron aralioides HOM05D000730 ORTHO05D000578 1.3e-18 97.1 127 53.5
MBI04_g45216_MAGBIO Magnolia biondii HOM05D000730 ORTHO05D000578 2.2e-18 96.3 143 49.7
SEGI_17425 Sequoiadendron giganteum HOM05D000730 ORTHO05D030596 6.4e-18 94.7 107 59.8
Hma1.2p1_0012F.1_g007300 Hydrangea macrophylla HOM05D000730 ORTHO05D000578 7.1e-17 91.3 121 53.7
Nn8g39126 Nelumbo nucifera HOM05D000730 ORTHO05D000578 9.3e-17 90.9 127 50.4
Nn2g11621 Nelumbo nucifera HOM05D000730 ORTHO05D000578 3.0e-15 85.9 132 47.0
Aqoxy7G01481 Aquilegia oxysepala HOM05D000730 ORTHO05D000578 3.9e-15 85.5 137 45.3
Cfa003203 Carpinus fangiana HOM05D000730 ORTHO05D000578 8.7e-15 84.3 122 47.5
Gohir.D06G064700 Gossypium hirsutum HOM05D000730 ORTHO05D000578 8.7e-15 84.3 121 51.2
Gorai.010G075600 Gossypium raimondii HOM05D000730 ORTHO05D000578 8.7e-15 84.3 121 51.2
COL.COLO4_34779 Corchorus olitorius HOM05D000730 ORTHO05D000578 1.1e-14 84.0 123 49.6
Actinidia14675 Actinidia chinensis HOM05D000730 ORTHO05D000578 1.5e-14 83.6 125 49.6
Aqoxy7G03900 Aquilegia oxysepala HOM05D000730 ORTHO05D000578 1.9e-14 83.2 127 51.2
Dinv36702 Davidia involucrata HOM05D000730 ORTHO05D000578 1.9e-14 83.2 122 48.4
Gohir.A06G066100 Gossypium hirsutum HOM05D000730 ORTHO05D000578 1.9e-14 83.2 121 50.4
CANSAT56G2406 Cannabis sativa HOM05D000730 ORTHO05D000578 3.3e-14 82.4 118 48.3
Duzib150G1007 Durio zibethinus HOM05D000730 ORTHO05D000578 3.3e-14 82.4 121 50.4
Manes.16G110800 Manihot esculenta HOM05D000730 ORTHO05D000578 3.3e-14 82.4 122 47.5
CDE04G1445 Ceratophyllum demersum HOM05D000730 ORTHO05D000578 5.6e-14 81.6 124 50.0
Duzib187G1057 Durio zibethinus HOM05D000730 ORTHO05D000578 5.6e-14 81.6 121 49.6
PSO210G4110 Papaver somniferum HOM05D000730 ORTHO05D000578 5.6e-14 81.6 132 49.2
CSS0050520 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D000578 9.6e-14 80.9 137 41.6
Ciclev10007350m.g Citrus clementina HOM05D000730 ORTHO05D000578 1.6e-13 80.1 114 47.4
Peaxi162Scf00227g00720 Petunia axillaris HOM05D000730 ORTHO05D000578 3.6e-13 79.0 129 49.6
CiPaw.03G226700 Carya illinoinensis HOM05D000730 ORTHO05D000578 4.8e-13 78.6 121 48.8
Haze_25804 Corylus avellana HOM05D000730 ORTHO05D000578 4.8e-13 78.6 123 46.3
Thecc.09G103000 Theobroma cacao HOM05D000730 ORTHO05D000578 6.2e-13 78.2 123 48.0
Actinidia20416 Actinidia chinensis HOM05D000730 ORTHO05D000578 1.1e-12 77.4 119 47.9
CSS0037618 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D000578 1.4e-12 77.0 135 44.4
PSO210G0973 Papaver somniferum HOM05D000730 ORTHO05D000578 1.4e-12 77.0 133 47.4
PGR102G2343 Punica granatum HOM05D000730 ORTHO05D000578 1.4e-12 77.0 125 45.6
MD02G1060400 Malus domestica HOM05D000730 ORTHO05D000578 2.4e-12 76.3 117 49.6
Atru.chr7.1436_Atru.chr7.1437 Acer truncatum HOM05D000730 ORTHO05D000578 4.0e-12 75.5 115 47.0
CDE05G0913 Ceratophyllum demersum HOM05D000730 ORTHO05D000578 4.0e-12 75.5 122 45.1
MELO3C011140.2 Cucumis melo HOM05D000730 ORTHO05D000578 5.3e-12 75.1 122 49.2
CsaV3_2G030850 Cucumis sativus L. HOM05D000730 ORTHO05D000578 5.3e-12 75.1 122 49.2
CSS0034725 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D000578 6.9e-12 74.7 135 43.7
Lj4C406T2 Lonicera japonica HOM05D000730 ORTHO05D000578 9.0e-12 74.3 116 45.7
AUR62021434 Chenopodium quinoa HOM05D000730 ORTHO05D000578 1.2e-11 73.9 116 46.6
Lj4A409T48 Lonicera japonica HOM05D000730 ORTHO05D000578 1.2e-11 73.9 116 45.7
MBI01_g33728_MAGBIO Magnolia biondii HOM05D000730 ORTHO05D000578 1.2e-11 73.9 147 43.5
Prupe.7G222400 Prunus persica HOM05D000730 ORTHO05D000578 1.2e-11 73.9 121 44.6
ClCG10G005860 Citrullus lanatus HOM05D000730 ORTHO05D000578 2.0e-11 73.2 118 46.6
Prupe.1G081000 Prunus persica HOM05D000730 ORTHO05D000578 3.4e-11 72.4 151 37.7
AUR62010923 Chenopodium quinoa HOM05D000730 ORTHO05D000578 4.5e-11 72.0 116 45.7
Ah.14g082530 Amaranthus hybridus HOM05D000730 ORTHO05D000578 5.8e-11 71.6 120 45.8
Sp3g33330 Schrenkiella parvula HOM05D000730 ORTHO05D000578 5.8e-11 71.6 128 43.8
vmacro05370 Vaccinium macrocarpon HOM05D000730 ORTHO05D000578 5.8e-11 71.6 131 43.5
AT2G20010 Arabidopsis thaliana HOM05D000730 ORTHO05D000578 7.6e-11 71.2 125 44.8
BcaB03g16789 Brassica carinata HOM05D000730 ORTHO05D000578 7.6e-11 71.2 121 43.8
SalBow4G2421 Salvia bowleyana HOM05D000730 ORTHO05D000578 7.6e-11 71.2 120 46.7
Sed0003535 Sechium edule HOM05D000730 ORTHO05D000578 7.6e-11 71.2 119 47.9
Cpa.g.sc40.45 Carica papaya HOM05D000730 ORTHO05D000578 9.9e-11 70.9 108 49.1
Migut.A00203 Erythranthe guttata HOM05D000730 ORTHO05D000578 9.9e-11 70.9 124 45.2
Thhalv10001900m.g Eutrema salsugineum HOM05D000730 ORTHO05D000578 9.9e-11 70.9 121 45.5
MD15G1193900 Malus domestica HOM05D000730 ORTHO05D000578 1.3e-10 70.5 117 44.4
Gohir.D05G027100 Gossypium hirsutum HOM05D000730 ORTHO05D000578 1.7e-10 70.1 120 45.8
A07p00630 Brassica napus HOM05D000730 ORTHO05D000578 2.2e-10 69.7 123 43.1
ECA234G3316 Erigeron canadensis HOM05D000730 ORTHO05D000578 2.2e-10 69.7 118 44.1
THA.LOC104803756 Tarenaya hassleriana HOM05D000730 ORTHO05D000578 2.9e-10 69.3 121 45.5
AL3G48100 Arabidopsis lyrata HOM05D000730 ORTHO05D000578 3.8e-10 68.9 125 43.2
BraA07t27860Z Brassica rapa HOM05D000730 ORTHO05D000578 3.8e-10 68.9 123 43.1
MELO3C016625.2 Cucumis melo HOM05D000730 ORTHO05D000578 3.8e-10 68.9 119 45.4
Carub.0003s3426 Capsella rubella HOM05D000730 ORTHO05D000578 4.9e-10 68.6 124 42.7
CiPaw.07G204100 Carya illinoinensis HOM05D000730 ORTHO05D000578 4.9e-10 68.6 120 45.8
THA.LOC104820044 Tarenaya hassleriana HOM05D000730 ORTHO05D000578 4.9e-10 68.6 124 46.0
MSTRG.26377 Avicennia marina HOM05D000730 ORTHO05D000578 6.4e-10 68.2 122 42.6
ClCG08G012220 Citrullus lanatus HOM05D000730 ORTHO05D000578 6.4e-10 68.2 122 44.3
MD15G1093300 Malus domestica HOM05D000730 ORTHO05D000578 6.4e-10 68.2 127 41.7
Nitab4.5_0000012g0040 Nicotiana tabacum HOM05D000730 ORTHO05D000578 6.4e-10 68.2 113 45.1
CSS0045085 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D000578 8.4e-10 67.8 131 45.0
Gorai.009G027200 Gossypium raimondii HOM05D000730 ORTHO05D000578 8.4e-10 67.8 120 45.0
Lsat_1_v5_gn_8_96680 Lactuca sativa HOM05D000730 ORTHO05D000578 8.4e-10 67.8 122 43.4
Atru.chr7.2087 Acer truncatum HOM05D000730 ORTHO05D000578 1.1e-09 67.4 128 43.0
Aa31LG8G16950 Aethionema arabicum HOM05D000730 ORTHO05D000578 1.1e-09 67.4 122 45.1
CsaV3_3G005520 Cucumis sativus L. HOM05D000730 ORTHO05D000578 1.1e-09 67.4 119 44.5
Sabra18G0074200 Salix brachista HOM05D000730 ORTHO05D000578 1.1e-09 67.4 125 40.8
C07p01510 Brassica napus HOM05D000730 ORTHO05D000578 1.4e-09 67.0 123 42.3
Gohir.A05G025600 Gossypium hirsutum HOM05D000730 ORTHO05D000578 1.4e-09 67.0 114 47.4
Potri.018G085900 Populus trichocarpa HOM05D000730 ORTHO05D000578 1.4e-09 67.0 123 43.1
QL02p042190 Quercus lobata HOM05D000730 ORTHO05D000578 1.4e-09 67.0 114 48.2
Glyma.16G077200 Glycine max HOM05D000730 ORTHO05D000578 1.9e-09 66.6 110 47.3
Nitab4.5_0001894g0030 Nicotiana tabacum HOM05D000730 ORTHO05D000578 1.9e-09 66.6 127 44.9
Psat6g233320 Pisum sativum HOM05D000730 ORTHO05D000578 1.9e-09 66.6 115 44.3
Zm00001eb310520 Zea mays HOM05D000730 ORTHO05D000578 1.9e-09 66.6 132 44.7
BcaC06g36674 Brassica carinata HOM05D000730 ORTHO05D000578 4.2e-09 65.5 123 42.3
BolC7t40563H Brassica oleracea HOM05D000730 ORTHO05D000578 4.2e-09 65.5 123 42.3
Ciclev10007340m.g Citrus clementina HOM05D000730 ORTHO05D000578 4.2e-09 65.5 128 44.5
Glyma.01G009400 Glycine max HOM05D000730 ORTHO05D000578 4.2e-09 65.5 110 46.4
CAN.G400.5 Capsicum annuum HOM05D000730 ORTHO05D000578 5.5e-09 65.1 128 43.8
Nitab4.5_0003794g0070 Nicotiana tabacum HOM05D000730 ORTHO05D000578 5.5e-09 65.1 125 44.8
TWI32G0504 Tripterygium wilfordii HOM05D000730 ORTHO05D000578 5.5e-09 65.1 124 41.9
Aa31LG5G9880 Aethionema arabicum HOM05D000730 ORTHO05D000578 7.1e-09 64.7 127 44.1
DCAR_028665 Daucus carota HOM05D000730 ORTHO05D000578 7.1e-09 64.7 120 45.0
Hund09239 Selenicereus undatus HOM05D000730 ORTHO05D000578 7.1e-09 64.7 119 46.2
Zm00001eb098460 Zea mays HOM05D000730 ORTHO05D000578 7.1e-09 64.7 129 45.0
DCAR_000753 Daucus carota HOM05D000730 ORTHO05D000578 9.3e-09 64.3 129 38.8
Gohir.A07G007901 Gossypium hirsutum HOM05D000730 ORTHO05D000578 9.3e-09 64.3 116 44.8
Gohir.D07G008333 Gossypium hirsutum HOM05D000730 ORTHO05D000578 9.3e-09 64.3 116 44.8
Gorai.001G008200 Gossypium raimondii HOM05D000730 ORTHO05D000578 9.3e-09 64.3 116 44.8
Phvul.004G169900 Phaseolus vulgaris HOM05D000730 ORTHO05D000578 9.3e-09 64.3 110 46.4
Cfa013366 Carpinus fangiana HOM05D000730 ORTHO05D000578 1.2e-08 63.9 128 41.4
Cc06_g10270 Coffea canephora HOM05D000730 ORTHO05D000578 1.2e-08 63.9 115 41.7
RcHm_v2.0_Chr2g0091591 Rosa chinensis HOM05D000730 ORTHO05D000578 1.2e-08 63.9 118 45.8
VMungo0464G1767 Vigna mungo HOM05D000730 ORTHO05D000578 1.2e-08 63.9 110 46.4
Gohir.A08G249900 Gossypium hirsutum HOM05D000730 ORTHO05D000578 1.6e-08 63.5 128 41.4
Manes.16G075400 Manihot esculenta HOM05D000730 ORTHO05D000578 1.6e-08 63.5 128 40.6
TWI63G0957 Tripterygium wilfordii HOM05D000730 ORTHO05D000578 1.6e-08 63.5 121 41.3
Ca_11224_v3 Cicer arietinum L. HOM05D000730 ORTHO05D000578 2.1e-08 63.2 109 47.7
Sc08g0007850 Simmondsia chinensis HOM05D000730 ORTHO05D000578 2.1e-08 63.2 121 40.5
TWI34G1024 Tripterygium wilfordii HOM05D000730 ORTHO05D000578 2.1e-08 63.2 129 39.5
GSVIVG01035623001 Vitis vinifera HOM05D000730 ORTHO05D000578 2.1e-08 63.2 125 43.2
Cpa.g.c24654.1 Carica papaya HOM05D000730 ORTHO05D000578 3.5e-08 62.4 119 45.4
Gohir.D05G048400 Gossypium hirsutum HOM05D000730 ORTHO05D000578 3.5e-08 62.4 130 40.0
Gorai.009G049700 Gossypium raimondii HOM05D000730 ORTHO05D000578 3.5e-08 62.4 130 40.0
AL4G17520 Arabidopsis lyrata HOM05D000730 ORTHO05D000578 4.6e-08 62.0 125 43.2
AT2G25800 Arabidopsis thaliana HOM05D000730 ORTHO05D000578 4.6e-08 62.0 121 43.0
Medtr1g114270 Medicago truncatula HOM05D000730 ORTHO05D000578 4.6e-08 62.0 115 42.6
SGA_v2.0_scaffold103G30004 Striga asiatica HOM05D000730 ORTHO05D000578 4.6e-08 62.0 125 41.6
unitig_0.g2572 Utricularia gibba HOM05D000730 ORTHO05D000578 4.6e-08 62.0 126 40.5
FvH4_1g05840 Fragaria vesca HOM05D000730 ORTHO05D000578 6.0e-08 61.6 115 47.0
FAN19G0986 Fragaria x ananassa HOM05D000730 ORTHO05D000578 6.0e-08 61.6 115 47.0
Gohir.D08G270700 Gossypium hirsutum HOM05D000730 ORTHO05D000578 6.0e-08 61.6 129 39.5
Lalb_Chr22g0352591 Lupinus albus HOM05D000730 ORTHO05D000578 6.0e-08 61.6 116 40.5
Solyc08g066600.4 Solanum lycopersicum HOM05D000730 ORTHO05D000578 6.0e-08 61.6 129 42.6
MSTRG.11697 Avicennia marina HOM05D000730 ORTHO05D000578 7.9e-08 61.2 125 41.6
EL10Ac8g18406 Beta vulgaris HOM05D000730 ORTHO05D000578 7.9e-08 61.2 109 45.0
HanXRQChr16g0510621 Helianthus annuus HOM05D000730 ORTHO05D000578 7.9e-08 61.2 119 41.2
MD08G1113600 Malus domestica HOM05D000730 ORTHO05D000578 7.9e-08 61.2 129 39.5
Sp4g05560 Schrenkiella parvula HOM05D000730 ORTHO05D000578 7.9e-08 61.2 128 40.6
TPR.G4051 Trifolium pratense HOM05D000730 ORTHO05D000578 7.9e-08 61.2 116 41.4
Carub.0004s0559 Capsella rubella HOM05D000730 ORTHO05D000578 1.0e-07 60.8 125 42.4
Cc08_g09580 Coffea canephora HOM05D000730 ORTHO05D000578 1.0e-07 60.8 141 41.8
FAN20G0473 Fragaria x ananassa HOM05D000730 ORTHO05D000578 1.0e-07 60.8 126 38.9
TWI34G1273 Tripterygium wilfordii HOM05D000730 ORTHO05D000578 1.0e-07 60.8 120 40.0
CARHR110480 Cardamine hirsuta HOM05D000730 ORTHO05D000578 1.3e-07 60.5 126 41.3
FAN15G2316 Fragaria x ananassa HOM05D000730 ORTHO05D000578 1.3e-07 60.5 126 38.9
FAN23G1003 Fragaria x ananassa HOM05D000730 ORTHO05D000578 1.3e-07 60.5 115 47.0
FAN27G2696 Fragaria x ananassa HOM05D000730 ORTHO05D000578 1.3e-07 60.5 126 38.9
Lsat_1_v5_gn_1_46601 Lactuca sativa HOM05D000730 ORTHO05D000578 1.3e-07 60.5 127 42.5
Lalb_Chr11g0064501 Lupinus albus HOM05D000730 ORTHO05D000578 1.3e-07 60.5 124 38.7
Sed0004211 Sechium edule HOM05D000730 ORTHO05D000578 1.3e-07 60.5 122 41.0
CiPaw.08G025900 Carya illinoinensis HOM05D000730 ORTHO05D000578 1.8e-07 60.1 128 42.2
RcHm_v2.0_Chr6g0306221 Rosa chinensis HOM05D000730 ORTHO05D000578 1.8e-07 60.1 133 36.8
FAN26G1100 Fragaria x ananassa HOM05D000730 ORTHO05D000578 2.3e-07 59.7 115 47.8
FAN26G2753 Fragaria x ananassa HOM05D000730 ORTHO05D000578 2.3e-07 59.7 115 47.0
CARHR115440 Cardamine hirsuta HOM05D000730 ORTHO05D000578 3.0e-07 59.3 123 41.5
Sopen08g020440 Solanum pennellii HOM05D000730 ORTHO05D000578 3.0e-07 59.3 127 41.7
Thecc.09G045400 Theobroma cacao HOM05D000730 ORTHO05D000578 3.0e-07 59.3 135 37.8
CiPaw.04G159300 Carya illinoinensis HOM05D000730 ORTHO05D000578 3.9e-07 58.9 122 42.6
Peaxi162Scf00001g00129 Petunia axillaris HOM05D000730 ORTHO05D000578 3.9e-07 58.9 147 35.4
SGA_v2.0_scaffold129G34171 Striga asiatica HOM05D000730 ORTHO05D000578 3.9e-07 58.9 121 38.8
Gorai.004G288600 Gossypium raimondii HOM05D000730 ORTHO05D000578 5.1e-07 58.5 129 38.8
Duzib168G2244 Durio zibethinus HOM05D000730 ORTHO05D000578 6.7e-07 58.2 137 36.5
Haze_21889 Corylus avellana HOM05D000730 ORTHO05D000578 8.7e-07 57.8 127 38.6
Eucgr.C03784 Eucalyptus grandis HOM05D000730 ORTHO05D000578 8.7e-07 57.8 137 37.2
FAN28G0700 Fragaria x ananassa HOM05D000730 ORTHO05D000578 8.7e-07 57.8 115 46.1
Glyma.04G084300 Glycine max HOM05D000730 ORTHO05D000578 8.7e-07 57.8 122 40.2
Glyma.06G086000 Glycine max HOM05D000730 ORTHO05D000578 8.7e-07 57.8 122 40.2
Gohir.A05G046600 Gossypium hirsutum HOM05D000730 ORTHO05D000578 8.7e-07 57.8 139 36.0
Lalb_Chr23g0269631 Lupinus albus HOM05D000730 ORTHO05D000578 8.7e-07 57.8 128 37.5
Potri.018G044200 Populus trichocarpa HOM05D000730 ORTHO05D000578 8.7e-07 57.8 122 41.0
Lj1g0004750 Lotus japonicus HOM05D000730 ORTHO05D000578 1.5e-06 57.0 120 37.5
PGSC0003DMG400027431 Solanum tuberosum HOM05D000730 ORTHO05D000578 1.5e-06 57.0 123 39.8
Prupe.1G448100 Prunus persica HOM05D000730 ORTHO05D000578 1.9e-06 56.6 130 36.9
Sc09g0009290 Simmondsia chinensis HOM05D000730 ORTHO05D000578 2.5e-06 56.2 114 43.0
Ah.10g035020 Amaranthus hybridus HOM05D000730 ORTHO05D000578 3.3e-06 55.8 131 41.2
BcaB06g28087 Brassica carinata HOM05D000730 ORTHO05D000578 3.3e-06 55.8 127 38.6
CANSAT25G1141 Cannabis sativa HOM05D000730 ORTHO05D000578 3.3e-06 55.8 117 43.6
arahy.Tifrunner.gnm1.ann1.ZDU287 Arachis hypogaea HOM05D000730 ORTHO05D000578 4.3e-06 55.5 120 38.3
DCAR_012050 Daucus carota HOM05D000730 ORTHO05D000578 4.3e-06 55.5 121 33.9
Oeu053156.1 Olea europaea HOM05D000730 ORTHO05D000578 4.3e-06 55.5 134 36.6
PGSC0003DMG400002233 Solanum tuberosum HOM05D000730 ORTHO05D000578 4.3e-06 55.5 130 39.2
Thhalv10001895m.g Eutrema salsugineum HOM05D000730 ORTHO05D000578 5.6e-06 55.1 127 39.4
Ca_15590_v3 Cicer arietinum L. HOM05D000730 ORTHO05D000578 7.4e-06 54.7 122 42.6
MSTRG.1659 Avicennia marina HOM05D000730 ORTHO05D000578 9.6e-06 54.3 124 40.3
Duzib150G0630 Durio zibethinus HOM05D000730 ORTHO05D000578 9.6e-06 54.3 131 35.9
PGR044G1589 Punica granatum HOM05D000730 ORTHO05D000578 9.6e-06 54.3 131 41.2


User provided reference genes

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