Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02263 Sequoiadendron giganteum HOM05D001163 ORTHO05D001769 1.3e-94 349.7 179 100.0
SEGI_17599 Sequoiadendron giganteum HOM05D001163 ORTHO05D001769 1.3e-94 349.7 179 100.0
SEGI_21734 Sequoiadendron giganteum HOM05D001163 ORTHO05D001769 1.3e-94 349.7 179 100.0
SEGI_25695 Sequoiadendron giganteum HOM05D001163 ORTHO05D001769 1.3e-94 349.7 179 100.0
SEGI_29427 Sequoiadendron giganteum HOM05D001163 ORTHO05D001769 1.3e-94 349.7 179 100.0
SEGI_09686 Sequoiadendron giganteum HOM05D001163 ORTHO05D001769 6.0e-92 340.9 174 100.0
SEGI_12818 Sequoiadendron giganteum HOM05D001163 ORTHO05D001769 1.6e-49 199.9 211 57.8
ATR0043G042 Amborella trichopoda HOM05D001163 ORTHO05D001769 2.6e-18 96.3 220 35.5
GSVIVG01016162001 Vitis vinifera HOM05D001163 ORTHO05D001769 1.3e-17 94.0 191 39.8
Aqoxy1G01048 Aquilegia oxysepala HOM05D001163 ORTHO05D001769 3.7e-17 92.4 210 34.8
Hund06765 Selenicereus undatus HOM05D001163 ORTHO05D001769 8.3e-17 91.3 208 39.4
Prupe.2G094700 Prunus persica HOM05D001163 ORTHO05D001769 1.1e-16 90.9 233 35.2
Gohir.A01G129400 Gossypium hirsutum HOM05D001163 ORTHO05D001769 1.4e-16 90.5 237 32.5
MBI18_g15814_MAGBIO Magnolia biondii HOM05D001163 ORTHO05D001769 2.4e-16 89.7 210 33.8
QL08p053050 Quercus lobata HOM05D001163 ORTHO05D001769 2.4e-16 89.7 217 36.4
Gorai.002G143900 Gossypium raimondii HOM05D001163 ORTHO05D001769 3.1e-16 89.4 209 35.4
CANSAT56G0151 Cannabis sativa HOM05D001163 ORTHO05D001769 4.1e-16 89.0 214 36.9
Dinv36358 Davidia involucrata HOM05D001163 ORTHO05D001769 4.1e-16 89.0 233 34.3
Cpa.g.sc53.170 Carica papaya HOM05D001163 ORTHO05D001769 5.4e-16 88.6 229 34.1
Dinv31266 Davidia involucrata HOM05D001163 ORTHO05D001769 5.4e-16 88.6 234 34.2
Lalb_Chr06g0170041 Lupinus albus HOM05D001163 ORTHO05D001769 7.0e-16 88.2 227 36.6
Cfa001773 Carpinus fangiana HOM05D001163 ORTHO05D001769 9.1e-16 87.8 207 35.7
CDE06G1402 Ceratophyllum demersum HOM05D001163 ORTHO05D001769 9.1e-16 87.8 213 36.2
Duzib106G1239 Durio zibethinus HOM05D001163 ORTHO05D001769 9.1e-16 87.8 211 36.0
Ciclev10030689m.g Citrus clementina HOM05D001163 ORTHO05D001769 2.0e-15 86.7 214 36.0
RcHm_v2.0_Chr1g0336281 Rosa chinensis HOM05D001163 ORTHO05D001769 2.0e-15 86.7 212 36.8
Lj2A24T66 Lonicera japonica HOM05D001163 ORTHO05D001769 2.7e-15 86.3 233 33.0
Manes.07G093800 Manihot esculenta HOM05D001163 ORTHO05D001769 2.7e-15 86.3 204 36.8
HPP92_022575 Vanilla planifolia HOM05D001163 ORTHO05D001769 2.7e-15 86.3 189 37.6
PSO063G4402 Papaver somniferum HOM05D001163 ORTHO05D001769 3.5e-15 85.9 200 36.5
Hma1.2p1_0454F.1_g156250 Hydrangea macrophylla HOM05D001163 ORTHO05D001769 4.5e-15 85.5 215 34.9
arahy.Tifrunner.gnm1.ann1.PY5VJM Arachis hypogaea HOM05D001163 ORTHO05D001769 5.9e-15 85.1 204 37.3
Nn2g13882 Nelumbo nucifera HOM05D001163 ORTHO05D001769 5.9e-15 85.1 214 35.0
PSO339G4037 Papaver somniferum HOM05D001163 ORTHO05D001769 5.9e-15 85.1 200 36.5
Sopen03g019920 Solanum pennellii HOM05D001163 ORTHO05D001769 5.9e-15 85.1 207 34.8
Actinidia06719 Actinidia chinensis HOM05D001163 ORTHO05D001769 7.7e-15 84.7 228 33.8
CDE03G0138 Ceratophyllum demersum HOM05D001163 ORTHO05D001769 7.7e-15 84.7 237 33.8
Gohir.D01G118200 Gossypium hirsutum HOM05D001163 ORTHO05D001769 1.0e-14 84.3 209 34.4
Sopen11g003770 Solanum pennellii HOM05D001163 ORTHO05D001769 1.0e-14 84.3 205 35.6
Lalb_Chr21g0313071 Lupinus albus HOM05D001163 ORTHO05D001769 1.3e-14 84.0 208 36.5
Solyc11g007910.2 Solanum lycopersicum HOM05D001163 ORTHO05D001769 1.7e-14 83.6 205 35.6
Actinidia18556 Actinidia chinensis HOM05D001163 ORTHO05D001769 2.2e-14 83.2 228 33.8
Rhsim03G0111600 Rhododendron simsii HOM05D001163 ORTHO05D001769 2.2e-14 83.2 230 33.9
Sabra08G0020200 Salix brachista HOM05D001163 ORTHO05D001769 2.2e-14 83.2 220 35.0
Phvul.007G145500 Phaseolus vulgaris HOM05D001163 ORTHO05D001769 2.9e-14 82.8 225 33.8
PGSC0003DMG400016919 Solanum tuberosum HOM05D001163 ORTHO05D001769 2.9e-14 82.8 207 34.8
PGSC0003DMG400027362 Solanum tuberosum HOM05D001163 ORTHO05D001769 2.9e-14 82.8 204 35.3
Potri.010G231100 Populus trichocarpa HOM05D001163 ORTHO05D001769 3.8e-14 82.4 200 35.5
VMungo0720G0656 Vigna mungo HOM05D001163 ORTHO05D001769 3.8e-14 82.4 199 35.7
Peaxi162Scf00253g00219 Petunia axillaris HOM05D001163 ORTHO05D001769 5.0e-14 82.0 211 35.5
Sabra10G0179200 Salix brachista HOM05D001163 ORTHO05D001769 6.5e-14 81.6 200 36.0
COL.COLO4_32880 Corchorus olitorius HOM05D001163 ORTHO05D001769 1.1e-13 80.9 236 32.2
Migut.F01674 Erythranthe guttata HOM05D001163 ORTHO05D001769 1.1e-13 80.9 207 33.8
Peaxi162Scf00543g00214 Petunia axillaris HOM05D001163 ORTHO05D001769 1.1e-13 80.9 204 34.3
Lj5g0003206 Lotus japonicus HOM05D001163 ORTHO05D001769 1.5e-13 80.5 212 34.9
ECA233G4552 Erigeron canadensis HOM05D001163 ORTHO05D001769 1.9e-13 80.1 197 35.5
MD07G1074600 Malus domestica HOM05D001163 ORTHO05D001769 1.9e-13 80.1 234 33.3
EL10Ac4g08632 Beta vulgaris HOM05D001163 ORTHO05D001769 2.5e-13 79.7 203 36.0
Ah.04g163560 Amaranthus hybridus HOM05D001163 ORTHO05D001769 3.2e-13 79.3 211 35.5
Duzib114G0656 Durio zibethinus HOM05D001163 ORTHO05D001769 3.2e-13 79.3 211 34.6
Medtr1g090803 Medicago truncatula HOM05D001163 ORTHO05D001769 4.2e-13 79.0 231 31.6
Sc20g0001490 Simmondsia chinensis HOM05D001163 ORTHO05D001769 4.2e-13 79.0 197 35.5
Oeu005285.1 Olea europaea HOM05D001163 ORTHO05D001769 5.5e-13 78.6 207 33.8
SalBow6G2739 Salvia bowleyana HOM05D001163 ORTHO05D001769 5.5e-13 78.6 214 34.1
Thecc.10G089900 Theobroma cacao HOM05D001163 ORTHO05D001769 5.5e-13 78.6 239 31.8
Nitab4.5_0000593g0360 Nicotiana tabacum HOM05D001163 ORTHO05D001769 9.4e-13 77.8 201 35.3
Haze_16778 Corylus avellana HOM05D001163 ORTHO05D001769 1.2e-12 77.4 234 32.1
Nitab4.5_0000255g0020 Nicotiana tabacum HOM05D001163 ORTHO05D001769 1.2e-12 77.4 182 35.7
TPR.G37745 Trifolium pratense HOM05D001163 ORTHO05D001769 1.2e-12 77.4 207 34.8
arahy.Tifrunner.gnm1.ann1.SHM2EA Arachis hypogaea HOM05D001163 ORTHO05D001769 1.6e-12 77.0 208 36.1
Lalb_Chr02g0151121 Lupinus albus HOM05D001163 ORTHO05D001769 1.6e-12 77.0 180 35.6
vmacro07199 Vaccinium macrocarpon HOM05D001163 ORTHO05D001769 2.1e-12 76.6 145 37.9
Atru.chr12.912 Acer truncatum HOM05D001163 ORTHO05D001769 2.7e-12 76.3 179 36.3
MSTRG.401 Avicennia marina HOM05D001163 ORTHO05D001769 3.6e-12 75.9 211 33.2
TWI38G1849 Tripterygium wilfordii HOM05D001163 ORTHO05D001769 3.6e-12 75.9 211 34.1
HanXRQChr08g0218291 Helianthus annuus HOM05D001163 ORTHO05D001769 4.7e-12 75.5 192 36.5
vmacro10264 Vaccinium macrocarpon HOM05D001163 ORTHO05D001769 4.7e-12 75.5 168 38.7
Rhsim09G0145200 Rhododendron simsii HOM05D001163 ORTHO05D001769 1.0e-11 74.3 168 38.1
AUR62041258 Chenopodium quinoa HOM05D001163 ORTHO05D001769 1.4e-11 73.9 204 36.3
Nn6g35186 Nelumbo nucifera HOM05D001163 ORTHO05D001769 1.4e-11 73.9 211 33.6
TAR369G0606 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.4e-11 73.9 238 33.2
Gorai.011G233800 Gossypium raimondii HOM05D001163 ORTHO05D001769 1.8e-11 73.6 211 33.2
THA.LOC104816446 Tarenaya hassleriana HOM05D001163 ORTHO05D001769 1.8e-11 73.6 245 31.0
Gohir.A10G200200 Gossypium hirsutum HOM05D001163 ORTHO05D001769 2.3e-11 73.2 211 32.7
TWI63G0053 Tripterygium wilfordii HOM05D001163 ORTHO05D001769 3.0e-11 72.8 209 33.5
CSS0033081 Camellia sinensis var. sinensis HOM05D001163 ORTHO05D001769 4.0e-11 72.4 237 31.2
CsaV3_5G035810 Cucumis sativus L. HOM05D001163 ORTHO05D001769 4.0e-11 72.4 197 34.5
Ca_10456_v3 Cicer arietinum L. HOM05D001163 ORTHO05D001769 5.2e-11 72.0 207 33.8
Gohir.D10G208100 Gossypium hirsutum HOM05D001163 ORTHO05D001769 5.2e-11 72.0 211 33.2
PGR044G1566 Punica granatum HOM05D001163 ORTHO05D001769 5.2e-11 72.0 210 33.3
DCAR_006388 Daucus carota HOM05D001163 ORTHO05D001769 8.8e-11 71.2 214 33.6
AUR62043092 Chenopodium quinoa HOM05D001163 ORTHO05D001769 1.2e-10 70.9 214 33.6
Psat6g173560 Pisum sativum HOM05D001163 ORTHO05D001769 1.2e-10 70.9 235 31.5
Sp3g08780 Schrenkiella parvula HOM05D001163 ORTHO05D001769 1.2e-10 70.9 214 32.2
Sc06g0008960 Simmondsia chinensis HOM05D001163 ORTHO05D001769 1.2e-10 70.9 209 30.6
arahy.Tifrunner.gnm1.ann1.HZDG1A Arachis hypogaea HOM05D001163 ORTHO05D001769 2.0e-10 70.1 65 61.5
CSS0029005 Camellia sinensis var. sinensis HOM05D001163 ORTHO05D001769 2.6e-10 69.7 216 32.4
Oeu059824.1 Olea europaea HOM05D000620 ORTHO05D000537 2.6e-10 69.7 241 30.3
Eucgr.G02736 Eucalyptus grandis HOM05D001163 ORTHO05D001769 3.4e-10 69.3 212 32.5
Sed0016921 Sechium edule HOM05D001163 ORTHO05D001769 3.4e-10 69.3 201 33.3
TAR633G2218 Trochodendron aralioides HOM05D001163 ORTHO05D001769 3.4e-10 69.3 226 30.5
FAN01G1559 Fragaria x ananassa HOM05D001163 ORTHO05D001769 4.4e-10 68.9 116 42.2
Gorai.009G308200 Gossypium raimondii HOM05D001163 ORTHO05D001769 4.4e-10 68.9 146 37.7
MD02G1237400 Malus domestica HOM05D001163 ORTHO05D001769 4.4e-10 68.9 235 30.2
ECA238G2182 Erigeron canadensis HOM05D001163 ORTHO05D001769 7.5e-10 68.2 197 32.0
SGA_v2.0_scaffold41G15750 Striga asiatica HOM05D001163 ORTHO05D001769 9.8e-10 67.8 204 34.3
Lsat_1_v5_gn_8_17741 Lactuca sativa HOM05D001163 ORTHO05D001769 1.7e-09 67.0 211 33.6
PSO339G1246 Papaver somniferum HOM05D001163 ORTHO05D001769 1.7e-09 67.0 235 30.2
CiPaw.02G169900 Carya illinoinensis HOM05D001163 ORTHO05D001769 2.2e-09 66.6 211 31.8
Dinv29389 Davidia involucrata HOM05D001163 ORTHO05D001769 4.9e-09 65.5 229 30.6
PSO801G0238 Papaver somniferum HOM05D001163 ORTHO05D001769 6.3e-09 65.1 235 29.4
Hund00846 Selenicereus undatus HOM05D001163 ORTHO05D001769 6.3e-09 65.1 80 50.0
TAR453G0001 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.8e-08 63.5 148 38.5
CiPaw.01G265000 Carya illinoinensis HOM05D001163 ORTHO05D001769 2.4e-08 63.2 211 30.8
Dinv16242 Davidia involucrata HOM05D001163 ORTHO05D000649 2.4e-08 63.2 88 45.5
SalBow4G1952 Salvia bowleyana HOM05D001163 ORTHO05D001769 2.4e-08 63.2 215 32.1
Actinidia34787 Actinidia chinensis HOM05D001163 ORTHO05D001769 7.0e-08 61.6 182 32.4
Haze_23521 Corylus avellana HOM05D001163 ORTHO05D001769 7.0e-08 61.6 75 53.3
Cc02_g10550 Coffea canephora HOM05D001163 ORTHO05D001769 9.1e-08 61.2 200 31.5
Lj3A935G38 Lonicera japonica HOM05D001163 ORTHO05D001769 9.1e-08 61.2 218 29.8
Phvul.011G087100 Phaseolus vulgaris HOM05D001163 ORTHO05D001769 9.1e-08 61.2 68 55.9
Sabra04G0148300 Salix brachista HOM05D001163 ORTHO05D001769 9.1e-08 61.2 211 31.8
CSS0007886 Camellia sinensis var. sinensis HOM05D001163 ORTHO05D001769 1.2e-07 60.8 206 31.6
Thhalv10020131m.g Eutrema salsugineum HOM05D001163 ORTHO05D001769 1.2e-07 60.8 131 38.9
GSVIVG01031449001 Vitis vinifera HOM05D001163 ORTHO05D001769 1.2e-07 60.8 166 32.5
SEGI_14139 Sequoiadendron giganteum HOM05D001163 ORTHO05D001769 1.6e-07 60.5 76 46.1
FAN11G0081 Fragaria x ananassa HOM05D001163 ORTHO05D001769 2.7e-07 59.7 207 31.9
Medtr2g084475 Medicago truncatula HOM05D001163 ORTHO05D001769 2.7e-07 59.7 83 44.6
Os02g0823300 Oryza sativa ssp. japonica HOM05D001163 ORTHO05D001769 2.7e-07 59.7 181 34.3
TWI15G0953 Tripterygium wilfordii HOM05D001163 ORTHO05D001769 2.7e-07 59.7 64 54.7
Zm00001eb190930 Zea mays HOM05D001163 ORTHO05D001769 2.7e-07 59.7 181 32.0
FvH4_3g30470 Fragaria vesca HOM05D001163 ORTHO05D001769 3.5e-07 59.3 207 31.9
FAN16G2557 Fragaria x ananassa HOM05D001163 ORTHO05D001769 3.5e-07 59.3 209 31.1
Actinidia38893 Actinidia chinensis HOM05D001163 ORTHO05D001769 5.9e-07 58.5 172 33.7
AL6G14090 Arabidopsis lyrata HOM05D001163 ORTHO05D001769 5.9e-07 58.5 129 36.4
MSTRG.27505 Avicennia marina HOM05D001163 ORTHO05D001769 5.9e-07 58.5 195 31.3
Ca_01701_v3 Cicer arietinum L. HOM05D001163 ORTHO05D001769 5.9e-07 58.5 67 50.7
MELO3C026960.2 Cucumis melo HOM05D001163 ORTHO05D001769 5.9e-07 58.5 97 40.2
FAN25G2281 Fragaria x ananassa HOM05D001163 ORTHO05D001769 5.9e-07 58.5 207 31.4
Atru.chr3.3497 Acer truncatum HOM05D001163 ORTHO05D001769 7.7e-07 58.2 207 30.4
SGA_v2.0_scaffold277G46707 Striga asiatica HOM05D001163 ORTHO05D001769 7.7e-07 58.2 166 33.1
TAR623G0804 Trochodendron aralioides HOM05D001163 ORTHO05D001769 7.7e-07 58.2 227 29.5
CSS0042627 Camellia sinensis var. sinensis HOM05D001163 ORTHO05D001769 1.0e-06 57.8 209 30.6
Aa31LG11G5320 Aethionema arabicum HOM05D001163 ORTHO05D001769 1.3e-06 57.4 120 39.2
CiPaw.13G144500 Carya illinoinensis HOM05D001163 ORTHO05D001769 1.3e-06 57.4 203 31.5
Glyma.12G082400 Glycine max HOM05D001163 ORTHO05D001769 1.3e-06 57.4 75 49.3
Glyma.13G321300 Glycine max HOM05D001163 ORTHO05D001769 1.3e-06 57.4 68 52.9
MD11G1149900 Malus domestica HOM05D001163 ORTHO05D001769 1.3e-06 57.4 209 29.2
CAN.G1569.25 Capsicum annuum HOM05D000808 ORTHO05D000863 1.7e-06 57.0 115 40.0
Ciclev10027818m.g Citrus clementina HOM05D001163 ORTHO05D001769 1.7e-06 57.0 206 30.1
FAN10G3476 Fragaria x ananassa HOM05D001163 ORTHO05D001769 1.7e-06 57.0 196 31.6
Sed0018777 Sechium edule HOM05D001163 ORTHO05D001769 1.7e-06 57.0 201 30.8
arahy.Tifrunner.gnm1.ann1.7K6UQK Arachis hypogaea HOM05D001163 ORTHO05D001769 2.3e-06 56.6 72 44.4
arahy.Tifrunner.gnm1.ann1.IEY1AM Arachis hypogaea HOM05D001163 ORTHO05D001769 2.9e-06 56.2 69 50.7
A10p31630 Brassica napus HOM05D001163 ORTHO05D001769 2.9e-06 56.2 124 36.3
BraA10t45209Z Brassica rapa HOM05D001163 ORTHO05D001769 2.9e-06 56.2 124 36.3
CsaV3_6G014460 Cucumis sativus L. HOM05D001163 ORTHO05D001769 2.9e-06 56.2 97 39.2
Aa31LG5G8130 Aethionema arabicum HOM05D001163 ORTHO05D001769 3.8e-06 55.8 69 44.9
ClCG05G021440 Citrullus lanatus HOM05D001163 ORTHO05D001769 3.8e-06 55.8 197 31.0
C09p72300 Brassica napus HOM05D001163 ORTHO05D001769 5.0e-06 55.5 123 37.4
Cfa010135 Carpinus fangiana HOM05D001163 ORTHO05D001769 5.0e-06 55.5 215 32.6
CiPaw.14G106300 Carya illinoinensis HOM05D001163 ORTHO05D001769 5.0e-06 55.5 215 31.2
FvH4_7g06660 Fragaria vesca HOM05D001163 ORTHO05D001769 5.0e-06 55.5 116 37.1
FAN06G1746 Fragaria x ananassa HOM05D001163 ORTHO05D001769 5.0e-06 55.5 116 37.1
Psat5g253280 Pisum sativum HOM05D001163 ORTHO05D001769 5.0e-06 55.5 67 47.8
Potri.004G217700 Populus trichocarpa HOM05D001163 ORTHO05D001769 5.0e-06 55.5 212 29.7
PGR119G0029 Punica granatum HOM05D001163 ORTHO05D001769 5.0e-06 55.5 67 50.7
SGA_v2.0_scaffold176G39390 Striga asiatica HOM05D001163 ORTHO05D001769 5.0e-06 55.5 206 31.1
TPR.G32391 Trifolium pratense HOM05D001163 ORTHO05D001769 5.0e-06 55.5 67 47.8
BolC9t59974H Brassica oleracea HOM05D001163 ORTHO05D001769 6.6e-06 55.1 123 35.8
COL.COLO4_19220 Corchorus olitorius HOM05D001163 ORTHO05D001769 6.6e-06 55.1 65 47.7
Glyma.20G191400 Glycine max HOM05D001163 ORTHO05D001769 6.6e-06 55.1 205 29.8
Sed0028003 Sechium edule HOM05D001163 ORTHO05D001769 8.6e-06 54.7 89 39.3
SMO358G0436 Selaginella moellendorffii HOM05D001163 ORTHO05D001769 8.6e-06 54.7 165 33.9


User provided reference genes

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