Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29404 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 0.0e+00 1164.8 587 100.0
SEGI_30095 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 4.9e-260 901.0 552 84.6
SEGI_17063 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 1.1e-211 740.3 975 48.8
SEGI_19133 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 2.1e-133 480.3 359 71.3
Atru.chr10.2199 Acer truncatum HOM05D005165 ORTHO05D006361 1.3e-42 178.7 652 26.2
Ciclev10014034m.g Citrus clementina HOM05D005165 ORTHO05D006361 2.1e-40 171.4 688 27.5
Nn1g03565 Nelumbo nucifera HOM05D005165 ORTHO05D006361 4.6e-40 170.2 694 26.2
Lj2C270G14 Lonicera japonica HOM05D005165 ORTHO05D006361 4.4e-35 153.7 708 26.1
BcaNung02250 Brassica carinata HOM05D005165 ORTHO05D006361 6.4e-34 149.8 654 25.8
TWI63G0677 Tripterygium wilfordii HOM05D005165 ORTHO05D006361 1.9e-33 148.3 538 27.3
Gorai.010G179700 Gossypium raimondii HOM05D005165 ORTHO05D006361 2.4e-33 147.9 555 27.9
Gohir.D10G013600 Gossypium hirsutum HOM05D005165 ORTHO05D006361 5.4e-33 146.7 564 26.1
Hund23483 Selenicereus undatus HOM05D005165 ORTHO05D006361 1.6e-32 145.2 710 23.5
Manes.17G037700 Manihot esculenta HOM05D005165 ORTHO05D006361 3.5e-32 144.1 666 24.5
Gohir.D06G153700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 4.6e-32 143.7 553 27.1
Migut.M01303 Erythranthe guttata HOM05D005165 ORTHO05D006361 1.0e-31 142.5 662 24.9
Sp7g19990 Schrenkiella parvula HOM05D005165 ORTHO05D006361 6.6e-31 139.8 586 26.6
Aqoxy1G03259 Aquilegia oxysepala HOM05D005165 ORTHO05D006361 1.5e-30 138.7 717 24.5
MBI02_g22104_MAGBIO Magnolia biondii HOM05D005165 ORTHO05D006361 1.9e-30 138.3 586 25.8
MSTRG.15978 Avicennia marina HOM05D005165 ORTHO05D006361 2.5e-30 137.9 445 27.9
Oeu063907.1 Olea europaea HOM05D005165 ORTHO05D006361 3.3e-30 137.5 639 24.7
AL7G32110 Arabidopsis lyrata HOM05D005165 ORTHO05D006361 5.6e-30 136.7 608 24.3
BcaC09g51197 Brassica carinata HOM05D005165 ORTHO05D006361 7.3e-30 136.3 648 24.8
C01p15840 Brassica napus HOM05D005165 ORTHO05D006361 7.3e-30 136.3 648 24.8
AT4G21820 Arabidopsis thaliana HOM05D005165 ORTHO05D006361 2.8e-29 134.4 610 24.3
CSS0020297 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 2.8e-29 134.4 551 27.0
Gohir.A06G147800 Gossypium hirsutum HOM05D005165 ORTHO05D006361 2.8e-29 134.4 551 27.0
PSO541G6479 Papaver somniferum HOM05D005165 ORTHO05D006361 2.8e-29 134.4 670 24.9
Dinv13878 Davidia involucrata HOM05D005165 ORTHO05D006361 3.6e-29 134.0 554 26.0
Cfa000241 Carpinus fangiana HOM05D005165 ORTHO05D006361 4.8e-29 133.7 739 23.8
vmacro03694 Vaccinium macrocarpon HOM05D005165 ORTHO05D006361 4.8e-29 133.7 543 28.0
Ca_21091_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 6.2e-29 133.3 710 24.8
Cc09_g01850 Coffea canephora HOM05D005165 ORTHO05D006361 6.2e-29 133.3 729 24.7
Phvul.003G077600 Phaseolus vulgaris HOM05D005165 ORTHO05D006361 6.2e-29 133.3 585 25.0
Ca_30199_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 8.1e-29 132.9 710 24.2
GSVIVG01002377001 Vitis vinifera HOM05D005165 ORTHO05D006361 2.4e-28 131.3 461 27.5
COL.COLO4_31753 Corchorus olitorius HOM05D005165 ORTHO05D006361 3.1e-28 131.0 619 24.7
CANSAT56G1527 Cannabis sativa HOM05D005165 ORTHO05D006361 4.0e-28 130.6 522 26.1
PSO675G7058 Papaver somniferum HOM05D005165 ORTHO05D006361 4.0e-28 130.6 673 24.1
Thecc.06G218200 Theobroma cacao HOM05D005165 ORTHO05D006361 9.0e-28 129.4 499 24.6
Sc17g0007260 Simmondsia chinensis HOM05D005165 ORTHO05D006361 1.2e-27 129.0 647 24.6
BolC1t01538H Brassica oleracea HOM05D005165 ORTHO05D006361 2.0e-27 128.3 660 24.4
THA.LOC104813036 Tarenaya hassleriana HOM05D005165 ORTHO05D006361 2.0e-27 128.3 444 28.2
Potri.004G017500 Populus trichocarpa HOM05D005165 ORTHO05D006361 2.6e-27 127.9 462 28.1
Carub.0007s1958 Capsella rubella HOM05D005165 ORTHO05D006361 4.5e-27 127.1 614 24.4
Gohir.A10G013700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 4.5e-27 127.1 529 25.9
Sabra04G0009600 Salix brachista HOM05D005165 ORTHO05D006361 5.8e-27 126.7 457 27.4
Nitab4.5_0007482g0050 Nicotiana tabacum HOM05D005165 ORTHO05D006361 9.9e-27 125.9 677 25.3
QL05p073800 Quercus lobata HOM05D005165 ORTHO05D006361 1.3e-26 125.6 359 29.5
AUR62021974 Chenopodium quinoa HOM05D005165 ORTHO05D006361 2.2e-26 124.8 601 23.5
Prupe.4G023200 Prunus persica HOM05D005165 ORTHO05D006361 2.2e-26 124.8 708 23.2
MD10G1319300 Malus domestica HOM05D005165 ORTHO05D006361 3.8e-26 124.0 761 22.3
A01p13150 Brassica napus HOM05D005165 ORTHO05D006361 4.9e-26 123.6 634 24.6
CARHR228530 Cardamine hirsuta HOM05D005165 ORTHO05D006361 4.9e-26 123.6 594 24.7
AUR62012682 Chenopodium quinoa HOM05D005165 ORTHO05D006361 6.4e-26 123.2 601 23.8
Mapoly0043s0047 Marchantia polymorpha HOM05D005165 ORTHO05D006361 6.4e-26 123.2 556 24.3
PGR004G2872 Punica granatum HOM05D005165 ORTHO05D006361 2.4e-25 121.3 608 23.4
CsaV3_1G010870 Cucumis sativus L. HOM05D005165 ORTHO05D006361 3.2e-25 120.9 687 23.9
Psat4g007280 Pisum sativum HOM05D005165 ORTHO05D006361 4.2e-25 120.6 553 25.7
Ah.09g235020 Amaranthus hybridus HOM05D005165 ORTHO05D006361 7.1e-25 119.8 601 24.1
CSS0001066 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 7.1e-25 119.8 435 28.3
HanXRQChr05g0129591 Helianthus annuus HOM05D005165 ORTHO05D006361 9.3e-25 119.4 722 22.7
Haze_06780 Corylus avellana HOM05D005165 ORTHO05D006361 1.6e-24 118.6 322 28.9
unitig_748.g7100 Utricularia gibba HOM05D005165 ORTHO05D006361 1.6e-24 118.6 567 25.2
RcHm_v2.0_Chr5g0003561 Rosa chinensis HOM05D005165 ORTHO05D006361 2.1e-24 118.2 673 23.0
Duzib235G1549 Durio zibethinus HOM05D005165 ORTHO05D006361 3.5e-24 117.5 322 28.6
Sed0027912 Sechium edule HOM05D005165 ORTHO05D006361 7.9e-24 116.3 552 25.9
Lalb_Chr01g0014921 Lupinus albus HOM05D005165 ORTHO05D006361 1.8e-23 115.2 555 26.5
BraA01t01259Z Brassica rapa HOM05D005165 ORTHO05D006361 2.3e-23 114.8 646 24.0
arahy.Tifrunner.gnm1.ann1.FU33AK Arachis hypogaea HOM05D005165 ORTHO05D006361 3.0e-23 114.4 553 25.5
EL10Ac8g20027 Beta vulgaris HOM05D005165 ORTHO05D006361 3.0e-23 114.4 539 23.6
TPR.G37081 Trifolium pratense HOM05D005165 ORTHO05D006361 5.1e-23 113.6 569 23.4
ClCG03G004830 Citrullus lanatus HOM05D005165 ORTHO05D006361 6.7e-23 113.2 693 23.5
SGA_v2.0_scaffold4G01924 Striga asiatica HOM05D005165 ORTHO05D006361 6.7e-23 113.2 670 23.7
Rhsim13G0155600 Rhododendron simsii HOM05D005165 ORTHO05D006361 8.7e-23 112.8 720 23.1
Nitab4.5_0003254g0110 Nicotiana tabacum HOM05D005165 ORTHO05D006361 1.5e-22 112.1 441 28.8
Glyma.17G014900 Glycine max HOM05D005165 ORTHO05D006361 5.6e-22 110.2 556 23.4
Medtr4g131940 Medicago truncatula HOM05D005165 ORTHO05D006361 1.3e-21 109.0 540 24.1
Lj4g0017916 Lotus japonicus HOM05D005165 ORTHO05D006361 2.1e-21 108.2 747 22.1
arahy.Tifrunner.gnm1.ann1.QZ1TNI Arachis hypogaea HOM05D005165 ORTHO05D006361 3.7e-21 107.5 553 25.0
CiPaw.09G089900 Carya illinoinensis HOM05D005165 ORTHO05D006361 4.8e-21 107.1 204 33.3
ECA236G1313 Erigeron canadensis HOM05D005165 ORTHO05D006361 1.4e-20 105.5 320 26.9
Sopen02g025090 Solanum pennellii HOM05D005165 ORTHO05D006361 9.0e-20 102.8 458 25.8
arahy.Tifrunner.gnm1.ann1.K6JFDD Arachis hypogaea HOM05D005165 ORTHO05D006361 1.2e-19 102.4 553 24.8
Solyc02g080390.2 Solanum lycopersicum HOM05D005165 ORTHO05D006361 1.5e-19 102.1 516 24.4
Pp3c24_1350 Physcomitrium patens HOM05D005165 ORTHO05D006361 7.6e-19 99.8 383 24.8
TAR627G0931 Trochodendron aralioides HOM05D005165 ORTHO05D006361 7.6e-19 99.8 691 22.0
AagrBONN_evm.TU.Sc2ySwM_117.1637__1638 Anthoceros agrestis HOM05D005165 ORTHO05D006361 3.8e-18 97.4 599 21.7
Cpa.g.sc198.37 Carica papaya HOM05D005165 ORTHO05D006361 4.9e-18 97.1 428 26.9
FAN25G1001 Fragaria x ananassa HOM05D005165 ORTHO05D006361 1.4e-17 95.5 531 24.1
Eucgr.D01308 Eucalyptus grandis HOM05D005165 ORTHO05D006361 9.3e-17 92.8 396 27.0
FvH4_3g02340 Fragaria vesca HOM05D005165 ORTHO05D006361 3.5e-16 90.9 514 23.5
Thhalv10024235m.g Eutrema salsugineum HOM05D005165 ORTHO05D006361 4.6e-16 90.5 610 23.0
Actinidia05522 Actinidia chinensis HOM05D005165 ORTHO05D006361 7.9e-16 89.7 493 25.4
ATR0752G018 Amborella trichopoda HOM05D005165 ORTHO05D006361 7.9e-16 89.7 197 28.9
CDE05G2160 Ceratophyllum demersum HOM05D005165 ORTHO05D006361 1.3e-15 89.0 552 24.1
DCAR_004209 Daucus carota HOM05D005165 ORTHO05D006361 8.7e-15 86.3 647 21.3
CSS0012929 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 1.9e-14 85.1 573 23.4
FAN21G3214 Fragaria x ananassa HOM05D005165 ORTHO05D006361 1.9e-14 85.1 179 31.3
HPP92_012397 Vanilla planifolia HOM05D005165 ORTHO05D006361 1.3e-13 82.4 536 21.6
CiPaw.09G090000 Carya illinoinensis HOM05D005165 ORTHO05D006361 1.2e-11 75.9 289 25.6
Lsat_1_v5_gn_7_17640 Lactuca sativa HOM05D005165 ORTHO05D006361 1.5e-11 75.5 90 41.1
Glyma.07G259400 Glycine max HOM05D005165 ORTHO05D006361 1.3e-10 72.4 567 21.2
HPP92_012319 Vanilla planifolia HOM05D005165 ORTHO05D006361 1.4e-09 68.9 340 23.5
SMO200G0122 Selaginella moellendorffii HOM05D005165 ORTHO05D006361 1.9e-09 68.6 381 23.9
ATR0752G007 Amborella trichopoda HOM05D005165 ORTHO05D006361 4.2e-09 67.4 319 23.2
VMungo1215G1456 Vigna mungo HOM05D005165 ORTHO05D000002 9.3e-09 66.2 134 33.6
FAN21G2432 Fragaria x ananassa HOM05D005165 ORTHO05D006361 2.7e-08 64.7 312 24.7
CBR_g12408 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-08 64.3 86 37.2
Peaxi162Scf00262g00611 Petunia axillaris HOM05D005165 ORTHO05D006361 3.5e-08 64.3 433 22.9
Gorai.011G015400 Gossypium raimondii HOM05D005165 ORTHO05D006361 1.0e-07 62.8 136 33.1
CSS0021361 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 1.3e-07 62.4 74 44.6
GSVIVG01004517001 Vitis vinifera HOM05D005165 ORTHO05D006361 1.8e-07 62.0 161 32.3
MSTRG.15979 Avicennia marina HOM05D005165 ORTHO05D006361 3.9e-07 60.8 121 36.4
MELO3C002466.2 Cucumis melo HOM05D005165 ORTHO05D006361 1.5e-06 58.9 674 21.1


User provided reference genes

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