Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29392 Sequoiadendron giganteum HOM05D004478 ORTHO05D007440 7.6e-144 513.8 265 100.0
PGR042G4004 Punica granatum HOM05D004478 ORTHO05D007440 1.3e-79 300.4 255 60.8
Potri.014G067400 Populus trichocarpa HOM05D004478 ORTHO05D007440 8.6e-79 297.7 241 62.7
Ciclev10018542m.g Citrus clementina HOM05D004478 ORTHO05D007440 2.5e-78 296.2 238 63.4
HanXRQChr04g0122511 Helianthus annuus HOM05D004478 ORTHO05D007440 5.6e-78 295.0 247 61.9
Prupe.2G141700 Prunus persica HOM05D004478 ORTHO05D007440 7.3e-78 294.7 242 62.4
Rhsim07G0029300 Rhododendron simsii HOM05D004478 ORTHO05D007440 1.6e-77 293.5 224 65.6
Gohir.A04G045800 Gossypium hirsutum HOM05D004478 ORTHO05D007440 3.6e-77 292.4 241 61.8
Hund27372 Selenicereus undatus HOM05D004478 ORTHO05D007440 3.6e-77 292.4 239 59.4
Gohir.D05G336900 Gossypium hirsutum HOM05D004478 ORTHO05D007440 4.7e-77 292.0 241 61.4
MSTRG.4901 Avicennia marina HOM05D004478 ORTHO05D007440 6.2e-77 291.6 243 60.9
Gorai.009G361000 Gossypium raimondii HOM05D004478 ORTHO05D007440 1.1e-76 290.8 241 61.0
GSVIVG01027657001 Vitis vinifera HOM05D004478 ORTHO05D007440 1.1e-76 290.8 239 63.2
Phvul.007G022200 Phaseolus vulgaris HOM05D004478 ORTHO05D007440 1.4e-76 290.4 243 61.7
arahy.Tifrunner.gnm1.ann1.W3JVU2 Arachis hypogaea HOM05D004478 ORTHO05D007440 2.3e-76 289.7 237 61.6
MD02G1313300 Malus domestica HOM05D004478 ORTHO05D007440 2.3e-76 289.7 245 61.2
arahy.Tifrunner.gnm1.ann1.ZTQI5E Arachis hypogaea HOM05D004478 ORTHO05D007440 3.1e-76 289.3 237 61.6
SalBow5G5434 Salvia bowleyana HOM05D004478 ORTHO05D007440 3.1e-76 289.3 246 61.0
TPR.G2420 Trifolium pratense HOM05D004478 ORTHO05D007440 3.1e-76 289.3 251 59.8
arahy.Tifrunner.gnm1.ann1.MXE7NW Arachis hypogaea HOM05D004478 ORTHO05D007440 4.0e-76 288.9 237 61.6
arahy.Tifrunner.gnm1.ann1.R3KQ80 Arachis hypogaea HOM05D004478 ORTHO05D007440 4.0e-76 288.9 237 61.6
ECA236G4615 Erigeron canadensis HOM05D004478 ORTHO05D007440 4.0e-76 288.9 238 61.8
ATR0829G158 Amborella trichopoda HOM05D004478 ORTHO05D007440 5.2e-76 288.5 241 61.8
CiPaw.14G027200 Carya illinoinensis HOM05D004478 ORTHO05D007440 5.2e-76 288.5 237 61.6
Lj9C568T10 Lonicera japonica HOM05D004478 ORTHO05D018907 5.2e-76 288.5 234 64.5
Aqoxy7G00707 Aquilegia oxysepala HOM05D004478 ORTHO05D007440 6.8e-76 288.1 240 62.1
QL04p040032 Quercus lobata HOM05D004478 ORTHO05D007440 6.8e-76 288.1 240 62.5
Duzib213G0292 Durio zibethinus HOM05D004478 ORTHO05D007440 1.2e-75 287.3 241 60.2
Lalb_Chr02g0146291 Lupinus albus HOM05D004478 ORTHO05D007440 1.2e-75 287.3 245 61.2
Manes.05G047400 Manihot esculenta HOM05D004478 ORTHO05D007440 1.2e-75 287.3 249 59.0
Nn6g34058 Nelumbo nucifera HOM05D004478 ORTHO05D007440 1.2e-75 287.3 241 61.4
TWI59G0724 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 1.5e-75 287.0 248 58.1
CAN.G911.6 Capsicum annuum HOM05D004478 ORTHO05D007440 2.0e-75 286.6 262 56.5
Glyma.10G279100 Glycine max HOM05D004478 ORTHO05D007440 2.6e-75 286.2 251 59.4
MD07G1008800 Malus domestica HOM05D004478 ORTHO05D007440 2.6e-75 286.2 242 61.6
THA.LOC104827612 Tarenaya hassleriana HOM05D004478 ORTHO05D007440 2.6e-75 286.2 237 60.3
Thecc.01G379300 Theobroma cacao HOM05D004478 ORTHO05D007440 2.6e-75 286.2 230 63.9
MELO3C022488.2 Cucumis melo HOM05D004478 ORTHO05D007440 4.4e-75 285.4 237 61.2
CsaV3_6G006310 Cucumis sativus L. HOM05D004478 ORTHO05D007440 4.4e-75 285.4 233 61.8
Glyma.20G110600 Glycine max HOM05D004478 ORTHO05D007440 4.4e-75 285.4 246 60.2
VMungo0720G2491 Vigna mungo HOM05D004478 ORTHO05D007440 4.4e-75 285.4 248 59.3
Actinidia12201 Actinidia chinensis HOM05D004478 ORTHO05D007440 7.5e-75 284.6 232 61.2
DCAR_015895 Daucus carota HOM05D004478 ORTHO05D007440 7.5e-75 284.6 247 59.5
Sp5g02510 Schrenkiella parvula HOM05D004478 ORTHO05D007440 7.5e-75 284.6 249 59.0
AUR62013659 Chenopodium quinoa HOM05D004478 ORTHO05D007440 9.8e-75 284.3 234 61.5
Lsat_1_v5_gn_7_9321 Lactuca sativa HOM05D004478 ORTHO05D007440 9.8e-75 284.3 246 58.5
Solyc01g091090.4 Solanum lycopersicum HOM05D004478 ORTHO05D007440 9.8e-75 284.3 254 57.9
Aa31LG10G14990 Aethionema arabicum HOM05D004478 ORTHO05D007440 1.3e-74 283.9 243 60.1
CSS0018497 Camellia sinensis var. sinensis HOM05D004478 ORTHO05D007440 1.3e-74 283.9 237 61.6
AUR62004186 Chenopodium quinoa HOM05D004478 ORTHO05D007440 1.3e-74 283.9 248 59.3
MBI04_g11448_MAGBIO Magnolia biondii HOM05D004478 ORTHO05D007440 1.7e-74 283.5 239 61.5
Sopen01g036830 Solanum pennellii HOM05D004478 ORTHO05D007440 1.7e-74 283.5 254 57.9
SGA_v2.0_scaffold43G16502 Striga asiatica HOM05D004478 ORTHO05D007440 1.7e-74 283.5 271 56.8
Actinidia12243 Actinidia chinensis HOM05D004478 ORTHO05D007440 2.9e-74 282.7 230 61.7
Thhalv10005754m.g Eutrema salsugineum HOM05D004478 ORTHO05D007440 2.9e-74 282.7 247 59.9
Ah.05g174780 Amaranthus hybridus HOM05D004478 ORTHO05D007440 4.9e-74 282.0 237 58.2
Cfa011194 Carpinus fangiana HOM05D004478 ORTHO05D007440 4.9e-74 282.0 237 61.6
FAN10G0184 Fragaria x ananassa HOM05D004478 ORTHO05D007440 4.9e-74 282.0 242 61.2
Oeu064473.1 Olea europaea HOM05D004478 ORTHO05D007440 4.9e-74 282.0 235 60.9
BcaC02g10175 Brassica carinata HOM05D004478 ORTHO05D007440 6.4e-74 281.6 248 60.5
C04p31950 Brassica napus HOM05D004478 ORTHO05D007440 6.4e-74 281.6 248 60.5
BolC4t24748H Brassica oleracea HOM05D004478 ORTHO05D007440 6.4e-74 281.6 248 60.5
COL.COLO4_12522 Corchorus olitorius HOM05D004478 ORTHO05D007440 6.4e-74 281.6 238 60.9
PSO782G0861 Papaver somniferum HOM05D004478 ORTHO05D007440 6.4e-74 281.6 248 58.5
Lj5g0020792 Lotus japonicus HOM05D004478 ORTHO05D007440 8.3e-74 281.2 248 58.5
TWI14G0506 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 8.3e-74 281.2 248 59.3
FvH4_7g07690 Fragaria vesca HOM05D004478 ORTHO05D007440 1.4e-73 280.4 245 60.0
AL5G43050 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 1.9e-73 280.0 262 55.7
RcHm_v2.0_Chr1g0342581 Rosa chinensis HOM05D004478 ORTHO05D007440 2.4e-73 279.6 237 61.2
EL10Ac1g00864 Beta vulgaris HOM05D004478 ORTHO05D007440 3.2e-73 279.3 239 59.0
Ca_25666_v3 Cicer arietinum L. HOM05D004478 ORTHO05D007440 3.2e-73 279.3 235 58.7
Nitab4.5_0010730g0030 Nicotiana tabacum HOM05D004478 ORTHO05D007440 3.2e-73 279.3 255 58.4
TAR629G2829 Trochodendron aralioides HOM05D004478 ORTHO05D007440 3.2e-73 279.3 250 58.0
FAN06G3638 Fragaria x ananassa HOM05D004478 ORTHO05D007440 4.1e-73 278.9 242 60.3
Sabra14G0047400 Salix brachista HOM05D004478 ORTHO05D007440 4.1e-73 278.9 269 55.8
unitig_32.g11469 Utricularia gibba HOM05D004478 ORTHO05D007440 5.4e-73 278.5 243 58.8
FAN03G2702 Fragaria x ananassa HOM05D004478 ORTHO05D007440 7.0e-73 278.1 242 59.1
Sed0027727 Sechium edule HOM05D004478 ORTHO05D007440 7.0e-73 278.1 235 61.3
A04p01470 Brassica napus HOM05D004478 ORTHO05D007440 1.2e-72 277.3 229 62.0
BraA04t15865Z Brassica rapa HOM05D004478 ORTHO05D007440 2.1e-72 276.6 229 62.0
AT3G60740 Arabidopsis thaliana HOM05D004478 ORTHO05D007440 2.7e-72 276.2 262 55.0
Carub.0002s1115 Capsella rubella HOM05D004478 ORTHO05D007440 3.5e-72 275.8 236 58.9
Carub.0005s2747 Capsella rubella HOM05D004478 ORTHO05D007440 3.5e-72 275.8 242 57.9
CARHR171130 Cardamine hirsuta HOM05D004478 ORTHO05D007440 3.5e-72 275.8 250 56.8
ClCG06G000530 Citrullus lanatus HOM05D004478 ORTHO05D007440 1.3e-71 273.9 249 58.2
vmacro13419 Vaccinium macrocarpon HOM05D004478 ORTHO05D007440 2.3e-71 273.1 217 63.6
Medtr1g112130 Medicago truncatula HOM05D004478 ORTHO05D007440 5.1e-71 271.9 251 56.2
Psat6g230960 Pisum sativum HOM05D004478 ORTHO05D007440 1.5e-70 270.4 252 55.6
SHI13530 Sapria himalayana HOM05D004478 ORTHO05D007440 7.3e-70 268.1 238 57.1
Cc02_g24170 Coffea canephora HOM05D004478 ORTHO05D007440 9.5e-70 267.7 240 57.5
CDE12G0470 Ceratophyllum demersum HOM05D004478 ORTHO05D007440 8.1e-69 264.6 238 59.2
HPP92_014468 Vanilla planifolia HOM05D004478 ORTHO05D007440 2.3e-68 263.1 254 54.7
Atru.chr5.277 Acer truncatum HOM05D004478 ORTHO05D007440 8.9e-68 261.2 200 67.0
Mapoly0039s0061 Marchantia polymorpha HOM05D004478 ORTHO05D007440 2.6e-67 259.6 241 54.4
Peaxi162Scf00013g02924 Petunia axillaris HOM05D004478 ORTHO05D007440 3.7e-66 255.8 276 51.8
Haze_02652 Corylus avellana HOM05D004478 ORTHO05D007440 7.8e-64 248.1 187 67.4
Nitab4.5_0000252g0220 Nicotiana tabacum HOM05D004478 ORTHO05D007440 2.5e-62 243.0 220 59.1
SMO147G0207 Selaginella moellendorffii HOM05D004478 ORTHO05D007440 1.2e-61 240.7 243 51.9
AL2G22100 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 1.4e-60 237.3 186 65.1
Nitab4.5_0000457g0060 Nicotiana tabacum HOM05D004478 ORTHO05D007440 2.7e-56 223.0 179 63.7
AagrBONN_evm.TU.Sc2ySwM_344.164 Anthoceros agrestis HOM05D004478 ORTHO05D007440 8.7e-55 218.0 226 49.1
Sc02g0002670 Simmondsia chinensis HOM05D004478 ORTHO05D007440 5.3e-52 208.8 164 64.0
MD07G1009100 Malus domestica HOM05D004478 ORTHO05D007440 6.9e-52 208.4 170 64.1
Eucgr.E01450 Eucalyptus grandis HOM05D004478 ORTHO05D007440 3.4e-51 206.1 165 64.2
Duzib213G0739 Durio zibethinus HOM05D004478 ORTHO05D007440 1.3e-47 194.1 241 45.6
Cpa.g.sc145.17 Carica papaya HOM05D004478 ORTHO05D007440 8.7e-47 191.4 253 45.1
CBR_g24365 Chara braunii HOM05D004478 ORTHO05D007440 3.1e-44 183.0 261 42.9
Pp3c2_18070 Physcomitrium patens HOM05D004478 ORTHO05D007440 9.9e-43 177.9 177 52.5
Cre12.g490250 Chlamydomonas reinhardtii HOM05D004478 ORTHO05D007440 1.9e-33 147.1 239 38.1
Migut.N01621 Erythranthe guttata HOM05D004478 ORTHO05D007440 6.0e-32 142.1 149 55.0
MCO09G490 Micromonas commoda HOM05D004478 ORTHO05D007440 3.3e-30 136.3 213 36.2
CARHR186390 Cardamine hirsuta HOM05D004478 ORTHO05D018907 2.2e-26 123.6 111 53.2
PRCOL_00002890 Prasinoderma coloniale HOM05D004478 ORTHO05D007440 4.6e-24 115.9 261 29.9
Dinv43688 Davidia involucrata HOM05D004478 ORTHO05D018907 4.8e-21 105.9 106 50.0
Dinv43687 Davidia involucrata HOM05D004478 ORTHO05D007440 8.2e-21 105.1 81 65.4
AUR62044221 Chenopodium quinoa HOM05D004478 ORTHO05D007440 5.7e-14 82.4 76 56.6
AagrBONN_evm.TU.Sc2ySwM_228.35 Anthoceros agrestis HOM05D004478 ORTHO05D072883 9.4e-09 65.1 52 51.9


User provided reference genes

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