Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 2.1e-172 609.0 313 100.0
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 8.7e-46 188.3 223 48.9
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 3.6e-44 183.0 220 48.2
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 1.7e-41 174.1 223 45.7
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 2.2e-41 173.7 261 42.1
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 6.4e-41 172.2 213 47.9
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 8.4e-41 171.8 225 44.4
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 1.9e-40 170.6 242 42.6
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 3.2e-40 169.9 263 42.2
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 7.1e-40 168.7 250 41.2
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 9.3e-40 168.3 221 44.8
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 2.1e-39 167.2 263 41.1
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 2.7e-39 166.8 221 44.3
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 6.0e-39 165.6 242 42.1
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 6.0e-39 165.6 242 42.1
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 6.0e-39 165.6 242 42.1
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 1.3e-38 164.5 249 42.6
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 2.3e-38 163.7 221 44.8
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 2.3e-38 163.7 250 41.6
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 3.0e-38 163.3 250 41.6
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 3.0e-38 163.3 250 41.6
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 3.9e-38 162.9 251 41.0
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 8.7e-38 161.8 223 42.2
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 1.5e-37 161.0 223 39.9
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 3.3e-37 159.8 263 39.9
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 3.3e-37 159.8 242 42.1
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 4.3e-37 159.5 223 42.2
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 9.6e-37 158.3 260 39.2
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 1.3e-36 157.9 249 42.6
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 1.3e-36 157.9 241 40.2
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 2.1e-36 157.1 246 40.2
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 2.1e-36 157.1 224 43.3
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 2.1e-36 157.1 241 40.7
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 3.7e-36 156.4 245 38.8
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 3.7e-36 156.4 267 38.2
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 4.8e-36 156.0 218 40.8
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 1.1e-35 154.8 209 45.5
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 1.4e-35 154.5 235 43.0
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 1.8e-35 154.1 221 42.5
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.4e-35 153.7 235 39.6
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 3.1e-35 153.3 246 38.2
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 3.1e-35 153.3 234 42.3
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 4.0e-35 152.9 242 39.3
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 5.3e-35 152.5 221 40.7
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 6.9e-35 152.1 215 43.3
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 6.9e-35 152.1 239 40.2
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 6.9e-35 152.1 235 38.7
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 6.9e-35 152.1 235 38.7
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 9.0e-35 151.8 223 39.0
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 1.2e-34 151.4 223 40.4
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 1.2e-34 151.4 225 41.3
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 1.5e-34 151.0 255 39.6
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 1.5e-34 151.0 223 40.8
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 1.5e-34 151.0 278 36.7
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 2.0e-34 150.6 221 42.5
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 3.4e-34 149.8 239 39.3
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 5.8e-34 149.1 247 38.1
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 5.8e-34 149.1 235 39.1
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 5.8e-34 149.1 221 39.8
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 7.6e-34 148.7 215 39.5
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 1.0e-33 148.3 239 39.3
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 1.3e-33 147.9 239 38.9
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 1.7e-33 147.5 229 39.7
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 2.2e-33 147.1 246 37.8
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 2.9e-33 146.7 221 38.9
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 3.8e-33 146.4 247 37.7
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 4.9e-33 146.0 224 41.5
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 4.9e-33 146.0 221 38.9
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 6.4e-33 145.6 250 37.2
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 1.1e-32 144.8 250 37.6
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 1.1e-32 144.8 225 40.4
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 1.9e-32 144.1 250 36.4
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 1.9e-32 144.1 250 36.4
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 1.9e-32 144.1 250 36.4
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 1.9e-32 144.1 217 41.0
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 2.5e-32 143.7 271 36.2
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 2.5e-32 143.7 190 44.2
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 3.2e-32 143.3 275 36.7
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 7.1e-32 142.1 218 39.4
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 1.2e-31 141.4 253 37.9
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 1.2e-31 141.4 251 35.9
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 1.6e-31 141.0 271 34.7
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 1.6e-31 141.0 227 39.6
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 2.1e-31 140.6 244 36.5
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 2.7e-31 140.2 221 38.0
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 4.6e-31 139.4 254 35.8
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 7.9e-31 138.7 247 35.6
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 1.0e-30 138.3 223 38.6
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 3.9e-30 136.3 275 34.2
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 8.7e-30 135.2 253 38.7
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 7.4e-29 132.1 252 36.9
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 9.6e-29 131.7 223 36.3
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 2.1e-28 130.6 234 38.0
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 3.7e-28 129.8 215 37.2
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 4.8e-28 129.4 223 35.9
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 3.1e-27 126.7 220 36.8
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 9.0e-27 125.2 214 38.3
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 2.6e-26 123.6 212 36.3
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 3.8e-25 119.8 235 35.7
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 6.5e-25 119.0 169 41.4
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 6.5e-25 119.0 223 34.5
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 8.4e-25 118.6 153 39.9
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 2.5e-24 117.1 241 31.1
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 5.7e-21 105.9 214 33.6
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 1.3e-20 104.8 220 33.2
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 6.3e-20 102.4 242 30.2
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 1.8e-19 100.9 148 39.2
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 1.2e-18 98.2 216 31.0
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 1.5e-18 97.8 85 57.6
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 2.0e-18 97.4 90 55.6
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 1.3e-17 94.7 131 47.3
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 1.4e-16 91.3 171 35.1
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 1.2e-15 88.2 137 40.1
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 1.6e-15 87.8 203 29.6
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 2.1e-15 87.4 151 38.4
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 6.5e-09 65.9 134 35.8
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 1.6e-07 61.2 197 30.5


User provided reference genes

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