Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 0.0e+00 2284.6 1190 100.0
SEGI_24281 Sequoiadendron giganteum HOM05D000890 ORTHO05D007477 0.0e+00 2161.7 1129 99.9
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.4e-67 262.7 1227 26.6
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 6.6e-54 217.2 1032 26.0
Mapoly0003s0122 Marchantia polymorpha HOM05D020720 ORTHO05D007477 2.8e-20 105.5 935 22.7
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 8.5e-17 94.0 425 23.8
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 4.2e-16 91.7 596 23.2
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 1.2e-15 90.1 428 25.2
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 2.1e-15 89.4 708 21.9
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 2.7e-15 89.0 405 25.4
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 2.7e-15 89.0 406 24.9
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 4.6e-15 88.2 710 21.5
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 1.0e-14 87.0 471 24.0
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.0e-14 87.0 471 24.0
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 3.0e-14 85.5 407 25.3
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 5.1e-14 84.7 423 24.1
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 1.5e-13 83.2 408 24.8
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 4.3e-13 81.6 432 25.2
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 4.3e-13 81.6 444 24.1
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 4.3e-13 81.6 399 24.8
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 5.7e-13 81.3 499 22.4
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 7.4e-13 80.9 595 22.0
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 9.7e-13 80.5 408 24.3
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 9.7e-13 80.5 517 22.4
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 1.7e-12 79.7 513 21.8
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 1.7e-12 79.7 413 23.5
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 2.2e-12 79.3 536 23.3
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 2.8e-12 79.0 415 22.9
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 2.8e-12 79.0 405 24.4
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 4.8e-12 78.2 501 22.4
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 4.8e-12 78.2 413 23.5
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 6.3e-12 77.8 445 24.9
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 8.2e-12 77.4 716 21.5
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 1.8e-11 76.3 477 23.5
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 1.8e-11 76.3 390 24.9
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 2.4e-11 75.9 585 21.2
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 3.1e-11 75.5 537 22.9
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 3.1e-11 75.5 524 22.7
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 5.3e-11 74.7 441 23.6
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 5.3e-11 74.7 584 21.7
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 6.9e-11 74.3 710 21.8
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 1.5e-10 73.2 780 22.2
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 1.5e-10 73.2 855 21.4
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 1.5e-10 73.2 185 27.0
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 1.5e-10 73.2 457 23.4
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 2.0e-10 72.8 750 20.7
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 3.4e-10 72.0 425 24.0
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 3.4e-10 72.0 521 23.2
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 4.5e-10 71.6 789 21.9
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 4.5e-10 71.6 115 35.7
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 5.9e-10 71.2 421 25.2
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 5.9e-10 71.2 165 29.7
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 7.7e-10 70.9 512 22.7
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 7.7e-10 70.9 619 20.4
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.0e-09 70.5 417 22.1
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 1.3e-09 70.1 439 23.7
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 1.3e-09 70.1 399 25.1
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 1.3e-09 70.1 597 22.4
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 1.3e-09 70.1 212 26.9
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 2.2e-09 69.3 448 22.8
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 2.9e-09 68.9 570 20.5
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 2.9e-09 68.9 522 21.5
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 2.9e-09 68.9 115 34.8
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 3.8e-09 68.6 526 20.9
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 3.8e-09 68.6 530 22.1
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 5.0e-09 68.2 179 27.9
SEGI_08081 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 5.0e-09 68.2 110 39.1
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 5.0e-09 68.2 411 22.6
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 6.5e-09 67.8 400 24.2
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 8.5e-09 67.4 466 22.3
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 8.5e-09 67.4 429 24.0
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 1.4e-08 66.6 94 42.6
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 1.9e-08 66.2 211 28.9
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 4.2e-08 65.1 405 21.5
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 4.2e-08 65.1 415 22.7
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 5.5e-08 64.7 429 22.6
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 5.5e-08 64.7 216 29.6
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 7.2e-08 64.3 834 20.7
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 7.2e-08 64.3 138 31.2
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 1.2e-07 63.5 420 23.1
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 1.2e-07 63.5 420 23.1
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 1.6e-07 63.2 409 23.5
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 2.1e-07 62.8 203 27.6
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 2.7e-07 62.4 121 28.9
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 2.7e-07 62.4 409 22.7
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 3.6e-07 62.0 155 34.8
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 4.7e-07 61.6 310 25.8
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 6.1e-07 61.2 82 45.1
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 6.1e-07 61.2 541 20.7
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 7.9e-07 60.8 185 30.3
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 1.0e-06 60.5 432 21.8
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 3.0e-06 58.9 85 49.4
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 3.9e-06 58.5 229 26.2
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 5.1e-06 58.2 297 25.6
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 5.1e-06 58.2 167 28.7
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 6.7e-06 57.8 109 29.4
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 8.8e-06 57.4 168 24.4
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 8.8e-06 57.4 80 43.8
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 8.8e-06 57.4 85 48.2


User provided reference genes

Program Settings