Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 3.0e-87 325.1 159 100.0
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 1.3e-34 150.2 97 74.2
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 1.7e-34 149.8 81 85.2
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 3.0e-34 149.1 97 72.2
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 3.9e-34 148.7 81 84.0
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 3.9e-34 148.7 106 67.9
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 5.1e-34 148.3 81 84.0
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 5.1e-34 148.3 104 68.3
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 5.1e-34 148.3 81 82.7
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 1.1e-33 147.1 81 82.7
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 1.5e-33 146.7 87 78.2
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 1.9e-33 146.4 103 68.0
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 1.9e-33 146.4 108 65.7
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 2.5e-33 146.0 97 71.1
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 2.5e-33 146.0 81 81.5
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 2.5e-33 146.0 97 70.1
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 3.3e-33 145.6 97 71.1
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 3.3e-33 145.6 103 72.8
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 3.3e-33 145.6 107 65.4
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 4.3e-33 145.2 80 82.5
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 4.3e-33 145.2 95 73.7
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 4.3e-33 145.2 81 81.5
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 4.3e-33 145.2 103 67.0
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 4.3e-33 145.2 103 67.0
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 5.6e-33 144.8 103 67.0
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 7.3e-33 144.4 81 80.2
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 7.3e-33 144.4 99 69.7
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 7.3e-33 144.4 103 66.0
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 7.3e-33 144.4 103 66.0
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 7.3e-33 144.4 107 64.5
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 7.3e-33 144.4 114 64.0
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 7.3e-33 144.4 106 66.0
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 9.5e-33 144.1 103 66.0
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 1.2e-32 143.7 93 73.1
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 1.2e-32 143.7 107 64.5
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 1.2e-32 143.7 104 67.3
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 1.2e-32 143.7 105 65.7
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 1.6e-32 143.3 81 79.0
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 1.6e-32 143.3 97 70.1
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 1.6e-32 143.3 87 75.9
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 1.6e-32 143.3 93 73.1
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 1.6e-32 143.3 93 73.1
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 1.6e-32 143.3 81 79.0
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 1.6e-32 143.3 103 67.0
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 2.1e-32 142.9 104 69.2
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 2.1e-32 142.9 107 65.4
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 2.1e-32 142.9 82 79.3
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 2.8e-32 142.5 97 70.1
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 2.8e-32 142.5 103 66.0
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 2.8e-32 142.5 81 79.0
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 2.8e-32 142.5 81 79.0
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 2.8e-32 142.5 103 66.0
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 3.6e-32 142.1 82 78.0
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 3.6e-32 142.1 107 64.5
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 3.6e-32 142.1 94 72.3
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 3.6e-32 142.1 110 64.5
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 3.6e-32 142.1 96 70.8
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 3.6e-32 142.1 96 68.8
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 3.6e-32 142.1 80 81.2
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 4.7e-32 141.7 102 67.6
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 4.7e-32 141.7 103 66.0
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 6.2e-32 141.4 91 72.5
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 6.2e-32 141.4 99 67.7
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 6.2e-32 141.4 97 70.1
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 6.2e-32 141.4 97 70.1
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 6.2e-32 141.4 97 70.1
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 6.2e-32 141.4 103 65.0
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 6.2e-32 141.4 81 79.0
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 6.2e-32 141.4 81 79.0
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 8.1e-32 141.0 93 75.3
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 8.1e-32 141.0 95 67.4
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 1.1e-31 140.6 95 68.4
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 1.1e-31 140.6 82 76.8
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 1.4e-31 140.2 118 61.9
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 1.4e-31 140.2 91 71.4
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.4e-31 140.2 102 69.6
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 1.8e-31 139.8 88 72.7
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 1.8e-31 139.8 88 72.7
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 1.8e-31 139.8 80 80.0
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 2.3e-31 139.4 118 62.7
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 2.3e-31 139.4 79 79.7
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 2.3e-31 139.4 102 65.7
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.3e-31 139.4 105 67.6
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 3.1e-31 139.0 82 75.6
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 3.1e-31 139.0 87 72.4
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 3.1e-31 139.0 113 62.8
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 3.1e-31 139.0 91 71.4
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 3.1e-31 139.0 120 60.8
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.1e-31 139.0 120 61.7
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 3.1e-31 139.0 90 72.2
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 3.1e-31 139.0 93 71.0
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 4.0e-31 138.7 120 60.0
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 4.0e-31 138.7 92 72.8
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 4.0e-31 138.7 107 64.5
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 5.2e-31 138.3 113 61.1
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 5.2e-31 138.3 92 72.8
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 6.8e-31 137.9 80 78.8
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 6.8e-31 137.9 103 63.1
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 6.8e-31 137.9 90 71.1
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 6.8e-31 137.9 90 71.1
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 6.8e-31 137.9 106 64.2
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 1.2e-30 137.1 96 70.8
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 2.0e-30 136.3 105 66.7
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 2.0e-30 136.3 102 66.7
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 7.6e-30 134.4 101 62.4
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 1.7e-29 133.3 120 60.0
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 1.4e-28 130.2 137 51.1
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 1.6e-27 126.7 128 53.1
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 1.6e-27 126.7 98 61.2
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.3e-26 122.9 107 57.9
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 1.2e-24 117.1 152 44.1
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 1.7e-18 96.7 59 78.0
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 3.3e-17 92.4 59 72.9
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.1e-16 89.7 53 77.4
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 6.2e-16 88.2 76 61.8
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 8.1e-16 87.8 77 62.3
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 2.4e-15 86.3 71 60.6
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 7.1e-12 74.7 105 43.8
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 3.0e-10 69.3 55 63.6
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.8e-07 60.1 35 82.9
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 4.5e-06 55.5 39 61.5


User provided reference genes

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