Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29248 Sequoiadendron giganteum HOM05D003173 ORTHO05D003546 2.1e-94 349.0 175 100.0
SEGI_39582 Sequoiadendron giganteum HOM05D003173 ORTHO05D003546 6.0e-12 75.1 171 36.3
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 3.0e-11 72.8 141 39.0
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 8.6e-11 71.2 155 37.4
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 1.1e-10 70.9 136 41.2
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 1.5e-10 70.5 132 38.6
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 1.9e-10 70.1 136 35.3
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 2.5e-10 69.7 102 43.1
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 7.3e-10 68.2 124 34.7
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 7.3e-10 68.2 91 44.0
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 7.3e-10 68.2 122 38.5
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 1.2e-09 67.4 139 40.3
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 1.6e-09 67.0 134 39.6
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 2.1e-09 66.6 135 36.3
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 2.8e-09 66.2 133 36.8
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 2.8e-09 66.2 83 49.4
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 2.8e-09 66.2 119 40.3
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 2.8e-09 66.2 86 41.9
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 2.8e-09 66.2 135 35.6
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 3.6e-09 65.9 137 35.8
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 3.6e-09 65.9 141 36.2
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 6.2e-09 65.1 86 41.9
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 6.2e-09 65.1 135 37.0
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 6.2e-09 65.1 126 37.3
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 6.2e-09 65.1 84 41.7
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 6.2e-09 65.1 137 32.8
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 1.1e-08 64.3 82 46.3
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 1.1e-08 64.3 141 34.8
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 1.4e-08 63.9 124 37.1
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 1.8e-08 63.5 134 37.3
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 1.8e-08 63.5 123 37.4
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.8e-08 63.5 121 38.8
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 1.8e-08 63.5 137 34.3
Lalb_Chr19g0131611 Lupinus albus HOM05D003173 ORTHO05D003546 2.4e-08 63.2 103 41.7
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 2.4e-08 63.2 133 36.1
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 3.1e-08 62.8 106 36.8
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 3.1e-08 62.8 139 33.8
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 4.0e-08 62.4 121 38.0
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 4.0e-08 62.4 121 38.8
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 6.8e-08 61.6 94 42.6
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 8.9e-08 61.2 128 42.2
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 8.9e-08 61.2 128 42.2
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.2e-07 60.8 130 33.8
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.2e-07 60.8 125 42.4
COL.COLO4_22498 Corchorus olitorius HOM05D003173 ORTHO05D003546 2.0e-07 60.1 139 33.1
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 2.0e-07 60.1 117 37.6
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 2.6e-07 59.7 119 38.7
BraA02t07073Z Brassica rapa HOM05D003173 ORTHO05D003546 3.4e-07 59.3 126 36.5
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 3.4e-07 59.3 124 35.5
Cfa007032 Carpinus fangiana HOM05D003173 ORTHO05D003546 4.4e-07 58.9 79 48.1
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 4.4e-07 58.9 138 35.5
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 5.8e-07 58.5 126 36.5
CARHR069610 Cardamine hirsuta HOM05D003173 ORTHO05D003546 5.8e-07 58.5 132 33.3
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 5.8e-07 58.5 154 33.8
TPR.G26427 Trifolium pratense HOM05D003173 ORTHO05D003546 5.8e-07 58.5 139 35.3
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 7.6e-07 58.2 136 36.8
Lalb_Chr01g0008491 Lupinus albus HOM05D003173 ORTHO05D003546 7.6e-07 58.2 88 39.8
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 7.6e-07 58.2 134 35.8
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 9.9e-07 57.8 133 35.3
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 9.9e-07 57.8 138 30.4
BolC2t09356H Brassica oleracea HOM05D003173 ORTHO05D003546 1.3e-06 57.4 144 33.3
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 1.7e-06 57.0 135 33.3
BcaC03g15643 Brassica carinata HOM05D003173 ORTHO05D003546 2.2e-06 56.6 144 33.3
C02p33480 Brassica napus HOM05D003173 ORTHO05D003546 2.2e-06 56.6 144 33.3
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 2.2e-06 56.6 126 31.0
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 2.9e-06 56.2 131 32.8
Sp5g31190 Schrenkiella parvula HOM05D003173 ORTHO05D003546 2.9e-06 56.2 127 33.9
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 2.9e-06 56.2 80 43.8
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 4.9e-06 55.5 136 36.8
Nitab4.5_0003030g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 4.9e-06 55.5 86 41.9
arahy.Tifrunner.gnm1.ann1.YK013F Arachis hypogaea HOM05D003173 ORTHO05D003546 6.4e-06 55.1 101 35.6
Lj4g0000766 Lotus japonicus HOM05D003173 ORTHO05D003546 6.4e-06 55.1 102 35.3
arahy.Tifrunner.gnm1.ann1.S3QWAM Arachis hypogaea HOM05D003173 ORTHO05D003546 8.4e-06 54.7 101 35.6
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 8.4e-06 54.7 131 29.0


User provided reference genes

Program Settings