Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 5.4e-281 970.3 477 100.0
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 3.4e-195 685.3 460 71.7
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 1.2e-192 676.8 452 70.8
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 1.4e-191 673.3 459 70.6
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 3.1e-188 662.1 440 71.4
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 1.7e-186 656.4 460 68.0
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 2.2e-186 656.0 461 70.3
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 3.8e-186 655.2 459 67.8
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 5.0e-186 654.8 465 69.0
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 6.5e-186 654.4 429 72.5
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 3.2e-185 652.1 429 71.6
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 5.5e-185 651.4 429 71.6
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 5.5e-185 651.4 432 71.5
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 7.2e-185 651.0 440 70.7
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 9.4e-185 650.6 428 72.0
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 9.4e-185 650.6 430 71.9
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 1.2e-184 650.2 429 72.3
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.6e-184 649.8 430 71.6
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.1e-184 649.4 429 71.1
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 1.0e-183 647.1 432 72.0
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 1.0e-183 647.1 430 69.1
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 1.4e-183 646.7 460 67.6
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 1.8e-183 646.4 430 69.8
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 2.3e-183 646.0 413 73.8
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 2.3e-183 646.0 429 71.3
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 2.3e-183 646.0 479 67.0
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 3.0e-183 645.6 428 70.8
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 3.0e-183 645.6 430 68.8
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 3.0e-183 645.6 429 71.3
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 3.0e-183 645.6 437 69.1
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 2.0e-182 642.9 464 67.7
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 2.6e-182 642.5 454 68.1
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 3.3e-182 642.1 430 69.3
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 5.7e-182 641.3 428 70.6
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 5.7e-182 641.3 429 69.7
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 7.5e-182 641.0 431 68.2
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 9.7e-182 640.6 460 66.5
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 9.7e-182 640.6 465 66.5
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 1.3e-181 640.2 428 69.6
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 1.7e-181 639.8 459 68.2
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.2e-181 639.4 431 68.2
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 8.2e-181 637.5 432 69.4
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 1.4e-180 636.7 430 68.6
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 1.8e-180 636.3 433 69.5
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 2.4e-180 636.0 466 65.2
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 5.3e-180 634.8 430 70.0
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 5.3e-180 634.8 431 68.2
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 7.0e-180 634.4 437 68.2
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 9.1e-180 634.0 431 67.7
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 9.1e-180 634.0 440 67.5
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 2.7e-179 632.5 430 69.1
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 7.7e-179 630.9 433 67.2
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 1.0e-178 630.6 473 65.3
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.3e-178 630.2 432 68.5
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 3.8e-178 628.6 439 67.9
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 3.8e-178 628.6 429 69.2
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 5.0e-178 628.2 433 68.1
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 6.5e-178 627.9 460 65.7
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 8.5e-178 627.5 432 66.9
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.1e-177 627.1 437 68.6
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 1.5e-177 626.7 459 65.4
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 1.5e-177 626.7 461 63.6
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 1.5e-177 626.7 430 68.6
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 1.9e-177 626.3 432 67.1
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 2.5e-177 625.9 427 69.3
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 4.2e-177 625.2 432 66.9
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 9.4e-177 624.0 432 66.9
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 9.4e-177 624.0 444 67.1
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 2.7e-176 622.5 460 65.4
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 6.1e-176 621.3 433 66.5
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 6.1e-176 621.3 452 64.6
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 1.8e-175 619.8 439 67.2
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 2.0e-174 616.3 433 65.6
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 5.7e-174 614.8 430 69.5
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 5.7e-174 614.8 462 63.4
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 7.5e-174 614.4 445 66.3
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 7.5e-174 614.4 433 66.1
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 7.5e-174 614.4 452 64.2
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 9.8e-174 614.0 444 64.9
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 1.7e-173 613.2 429 68.3
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 4.8e-173 611.7 450 66.2
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 4.8e-173 611.7 411 70.1
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 1.1e-172 610.5 461 62.9
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 1.1e-172 610.5 430 66.5
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 4.1e-172 608.6 448 64.1
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 4.5e-171 605.1 459 63.4
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 1.3e-170 603.6 459 64.5
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 1.7e-170 603.2 459 63.4
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 1.3e-165 587.0 473 63.0
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 2.2e-165 586.3 429 65.7
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 1.8e-164 583.2 397 69.0
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 3.1e-164 582.4 439 63.1
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 1.0e-162 577.4 519 58.6
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 2.9e-162 575.9 491 59.3
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 1.1e-161 573.9 443 64.3
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 4.3e-161 572.0 393 69.5
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 4.3e-161 572.0 439 63.3
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 1.2e-158 563.9 476 59.9
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 4.4e-158 562.0 394 66.2
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 9.8e-158 560.8 480 58.8
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 6.4e-157 558.1 389 68.9
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 1.4e-156 557.0 440 60.0
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 1.4e-156 557.0 409 66.3
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 3.5e-155 552.4 441 60.3
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 4.7e-152 542.0 362 69.9
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 9.2e-148 527.7 428 60.5
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 1.2e-147 527.3 442 59.7
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 1.6e-147 526.9 459 57.7
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 1.5e-137 493.8 322 72.0
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 2.3e-122 443.4 273 74.4
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 1.4e-116 424.1 436 52.8
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 5.4e-116 422.2 460 46.3
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 1.3e-114 417.5 458 49.3
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 9.3e-100 368.2 430 48.4
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 1.8e-90 337.4 315 56.2
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 1.1e-87 328.2 501 38.3
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 1.2e-86 324.7 367 49.0
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 3.7e-80 303.1 182 78.6
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 4.7e-51 206.5 107 86.0
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 1.4e-50 204.9 167 59.9
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 2.4e-47 194.1 374 35.3
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 7.8e-46 189.1 338 35.8
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 1.2e-35 155.2 124 62.9
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 3.1e-34 150.6 137 58.4
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 4.4e-33 146.7 369 30.6
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 5.4e-31 139.8 106 64.2
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 9.5e-28 129.0 83 61.4
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 1.6e-27 128.3 144 47.9
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 5.1e-21 106.7 69 63.8
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 6.6e-21 106.3 53 83.0
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 2.8e-19 100.9 224 28.1
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 1.1e-18 99.0 82 54.9
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 1.2e-17 95.5 80 52.5
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 3.2e-15 87.4 73 56.2
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 1.6e-14 85.1 67 53.7
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-13 81.6 104 45.2
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 6.2e-11 73.2 56 58.9
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 1.2e-09 68.9 113 38.9


User provided reference genes

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