Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29160 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.5e-120 435.6 247 100.0
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.0e-49 201.1 119 86.6
SEGI_35060 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 1.9e-40 170.2 120 73.3
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 4.0e-38 162.5 119 67.2
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 4.0e-38 162.5 119 67.2
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 2.9e-36 156.4 117 67.5
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 4.9e-36 155.6 119 63.9
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 8.4e-36 154.8 119 64.7
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 1.1e-35 154.5 119 64.7
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 1.9e-35 153.7 119 64.7
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 1.9e-35 153.7 119 64.7
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 1.9e-35 153.7 119 62.2
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 1.9e-35 153.7 119 64.7
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 3.2e-35 152.9 119 62.2
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 4.2e-35 152.5 119 63.9
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 4.2e-35 152.5 119 63.9
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 7.1e-35 151.8 119 63.0
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 9.3e-35 151.4 119 63.0
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 1.2e-34 151.0 119 61.3
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 1.2e-34 151.0 119 61.3
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 2.1e-34 150.2 119 61.3
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 2.1e-34 150.2 119 61.3
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 2.1e-34 150.2 119 61.3
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 2.7e-34 149.8 119 62.2
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 3.5e-34 149.4 119 60.5
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 6.0e-34 148.7 119 62.2
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 7.9e-34 148.3 119 59.7
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 1.3e-33 147.5 119 62.2
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 1.3e-33 147.5 119 60.5
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 1.7e-33 147.1 119 60.5
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 1.7e-33 147.1 119 60.5
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 2.3e-33 146.7 119 58.8
QL01p053501 Quercus lobata HOM05D003881 ORTHO05D004343 2.3e-33 146.7 119 59.7
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 3.0e-33 146.4 119 60.5
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 3.0e-33 146.4 119 58.8
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 3.0e-33 146.4 119 60.5
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 3.9e-33 146.0 119 58.8
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 3.9e-33 146.0 119 58.8
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 3.9e-33 146.0 119 58.0
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 3.9e-33 146.0 116 58.6
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 3.9e-33 146.0 119 60.5
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 3.9e-33 146.0 119 60.5
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 3.9e-33 146.0 119 58.8
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 6.6e-33 145.2 117 60.7
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 6.6e-33 145.2 119 59.7
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 8.7e-33 144.8 119 57.1
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 1.1e-32 144.4 119 60.5
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 1.1e-32 144.4 119 60.5
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 1.1e-32 144.4 119 58.8
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 1.1e-32 144.4 119 58.8
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 1.1e-32 144.4 119 59.7
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 1.1e-32 144.4 119 58.8
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 1.9e-32 143.7 116 58.6
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 1.9e-32 143.7 119 61.3
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 1.9e-32 143.7 119 58.0
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 1.9e-32 143.7 119 58.0
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 1.9e-32 143.7 119 58.8
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 2.5e-32 143.3 119 58.8
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 2.5e-32 143.3 119 59.7
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 2.5e-32 143.3 119 58.0
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 2.5e-32 143.3 119 58.8
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 3.3e-32 142.9 119 58.8
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 3.3e-32 142.9 119 58.8
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 4.3e-32 142.5 116 58.6
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 4.3e-32 142.5 119 60.5
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 5.6e-32 142.1 116 58.6
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 5.6e-32 142.1 119 58.0
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 1.3e-31 141.0 116 57.8
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 1.3e-31 141.0 116 57.8
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 1.6e-31 140.6 119 58.0
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 1.6e-31 140.6 111 61.3
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 1.6e-31 140.6 119 57.1
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 2.8e-31 139.8 119 54.6
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 2.8e-31 139.8 119 54.6
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 2.8e-31 139.8 119 54.6
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 2.8e-31 139.8 119 54.6
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 2.8e-31 139.8 119 54.6
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 3.6e-31 139.4 119 54.6
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 4.8e-31 139.0 119 55.5
CARHR103800 Cardamine hirsuta HOM05D003881 ORTHO05D004343 4.8e-31 139.0 119 55.5
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 4.8e-31 139.0 119 57.1
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 4.8e-31 139.0 119 54.6
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 6.2e-31 138.7 119 55.5
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 8.1e-31 138.3 119 53.8
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 8.1e-31 138.3 119 61.3
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 8.1e-31 138.3 119 57.1
SEGI_36108 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.4e-30 137.5 96 77.1
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 1.8e-30 137.1 119 58.0
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 1.8e-30 137.1 119 56.3
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 2.4e-30 136.7 119 55.5
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 5.3e-30 135.6 119 52.9
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 5.3e-30 135.6 111 61.3
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 1.2e-29 134.4 119 52.1
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 1.2e-29 134.4 119 55.5
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 2.0e-29 133.7 119 54.6
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 3.4e-29 132.9 159 47.8
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 2.2e-28 130.2 119 52.1
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 1.1e-27 127.9 119 51.3
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 1.4e-27 127.5 119 54.6
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 4.2e-27 125.9 119 50.4
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 4.3e-24 115.9 122 52.5
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 4.3e-24 115.9 119 51.3
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 6.2e-23 112.1 119 50.4
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 5.3e-22 109.0 119 48.7
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 9.0e-22 108.2 116 49.1
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 1.9e-19 100.5 119 45.4
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 7.1e-19 98.6 119 46.2
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 6.0e-18 95.5 119 42.0
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 7.9e-18 95.1 119 42.9
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.3e-17 94.4 119 44.5
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 2.3e-17 93.6 119 41.2
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 2.3e-17 93.6 119 41.2
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 2.3e-17 93.6 118 42.4
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 8.7e-17 91.7 119 42.0
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 1.1e-16 91.3 119 42.0
SEGI_25041 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 5.9e-13 79.0 47 80.9
Actinidia38472 Actinidia chinensis HOM05D003881 ORTHO05D004343 1.0e-12 78.2 74 51.4
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-12 77.4 56 60.7
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 8.4e-12 75.1 129 35.7
SEGI_25641 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.5e-10 69.7 41 82.9
ATR0193G048 Amborella trichopoda HOM05D003881 ORTHO05D004343 5.7e-08 62.4 73 46.6
CBR_g74627 Chara braunii HOM05D003881 ORTHO05D004343 1.1e-06 58.2 62 43.5
BolC7t41346H Brassica oleracea HOM05D003881 ORTHO05D004343 2.4e-06 57.0 80 40.0
C07p09280 Brassica napus HOM05D003881 ORTHO05D004343 6.9e-06 55.5 80 38.8


User provided reference genes

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