Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 0.0e+00 1625.9 885 100.0
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 2.0e-196 690.3 906 49.0
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 6.0e-193 678.7 874 49.8
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 1.4e-186 657.5 887 46.0
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 1.1e-181 641.3 869 46.5
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.8e-181 640.6 868 45.6
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 1.5e-180 637.5 868 45.2
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 5.8e-180 635.6 874 46.0
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 3.0e-176 623.2 868 45.6
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 8.7e-176 621.7 879 46.1
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 2.5e-175 620.2 879 46.9
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 3.3e-175 619.8 874 46.0
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 5.6e-175 619.0 855 45.5
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 1.3e-174 617.8 884 44.2
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.4e-173 614.4 875 45.1
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 6.4e-171 605.5 882 45.2
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.4e-170 603.6 884 46.2
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 3.2e-170 603.2 857 44.8
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 4.2e-170 602.8 878 44.8
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.2e-169 601.3 883 44.2
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 3.5e-169 599.7 866 43.1
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 6.0e-169 599.0 866 44.1
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 7.9e-169 598.6 866 44.2
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 1.3e-168 597.8 861 45.5
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 1.8e-168 597.4 862 44.8
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.9e-168 596.3 884 45.7
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 3.9e-168 596.3 859 44.6
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 2.5e-167 593.6 859 43.9
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 3.3e-167 593.2 878 43.4
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 7.4e-167 592.0 855 44.6
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.3e-166 591.3 870 42.8
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.3e-166 591.3 882 45.0
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.8e-166 590.1 858 45.3
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 8.1e-166 588.6 865 43.6
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 8.1e-166 588.6 862 43.7
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 1.8e-165 587.4 864 44.3
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 4.0e-165 586.3 862 44.9
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 2.0e-164 583.9 860 42.9
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 2.0e-164 583.9 861 44.9
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.6e-164 583.6 888 43.4
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 1.0e-163 581.6 864 44.0
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 6.5e-163 578.9 875 43.9
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 4.2e-162 576.2 872 42.3
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 4.2e-162 576.2 869 44.2
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 4.2e-162 576.2 703 50.8
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 5.5e-162 575.9 864 43.4
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 2.1e-161 573.9 872 42.2
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 6.7e-160 568.9 874 42.9
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 8.7e-160 568.5 867 41.9
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.5e-159 567.8 860 42.9
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 1.9e-159 567.4 862 42.8
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 4.3e-159 566.2 860 42.9
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 1.3e-158 564.7 880 42.3
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 2.1e-158 563.9 864 42.9
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 8.2e-158 562.0 862 41.2
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 9.0e-157 558.5 873 42.5
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.5e-156 557.8 879 41.5
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 3.4e-156 556.6 986 39.1
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 4.5e-156 556.2 901 40.6
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 7.6e-156 555.4 867 41.6
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 1.3e-155 554.7 862 43.3
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 1.7e-155 554.3 1004 38.7
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 2.2e-155 553.9 891 41.5
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 3.8e-155 553.1 869 42.1
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 8.4e-155 552.0 872 41.7
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 2.5e-154 550.4 882 41.3
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 3.2e-154 550.1 863 42.4
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 9.3e-154 548.5 882 41.6
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 9.3e-154 548.5 882 40.9
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 1.3e-152 544.7 859 43.5
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 1.8e-152 544.3 859 42.6
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 4.3e-151 539.7 864 42.6
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 7.4e-151 538.9 882 40.8
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 1.8e-149 534.3 877 40.7
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.5e-148 531.2 873 41.1
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 4.5e-148 529.6 865 41.2
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 2.9e-147 526.9 857 41.2
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 5.0e-147 526.2 740 45.7
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 3.2e-146 523.5 863 39.9
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 4.2e-146 523.1 863 39.7
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 5.5e-146 522.7 873 40.0
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 1.2e-145 521.5 906 40.2
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 1.6e-145 521.2 821 42.9
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.6e-145 521.2 863 39.7
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.7e-145 520.4 354 79.1
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 4.6e-145 519.6 860 40.1
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 4.6e-145 519.6 838 42.1
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 1.0e-144 518.5 859 40.5
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 1.8e-144 517.7 875 40.2
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.3e-144 517.3 867 39.6
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 3.0e-144 516.9 871 40.0
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 6.7e-144 515.8 872 39.6
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 1.1e-143 515.0 881 39.5
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 2.5e-143 513.8 891 40.5
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 2.4e-141 507.3 1027 37.1
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 5.3e-141 506.1 859 40.0
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 2.0e-140 504.2 872 40.3
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 3.8e-139 500.0 871 40.6
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 9.4e-138 495.4 853 40.2
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 4.4e-135 486.5 865 38.7
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 5.7e-135 486.1 869 39.6
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 9.7e-135 485.3 920 39.5
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.7e-134 483.4 663 45.9
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 8.2e-134 482.3 733 42.4
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 3.1e-133 480.3 881 38.6
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 4.5e-132 476.5 1024 35.3
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.7e-131 474.6 893 38.1
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 2.2e-131 474.2 869 38.1
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 5.0e-131 473.0 862 38.9
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 1.9e-130 471.1 873 37.0
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 7.2e-130 469.2 872 37.8
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 9.4e-130 468.8 870 38.3
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.7e-129 467.2 881 38.9
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 4.7e-129 466.5 873 38.3
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 5.2e-128 463.0 869 38.9
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 2.0e-127 461.1 869 37.7
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.6e-127 460.7 741 40.5
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 1.7e-126 458.0 897 36.9
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 8.2e-126 455.7 598 47.0
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 5.3e-125 453.0 617 47.0
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 7.0e-125 452.6 866 37.9
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 4.5e-124 449.9 873 36.7
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 1.0e-123 448.7 881 37.1
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 2.9e-123 447.2 879 37.4
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 1.5e-122 444.9 864 37.3
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 2.5e-122 444.1 877 37.2
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 1.0e-120 438.7 863 36.3
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 2.2e-118 431.0 876 35.4
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 4.1e-117 426.8 970 34.4
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 2.0e-116 424.5 875 34.9
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 7.7e-116 422.5 671 41.3
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.0e-115 422.2 883 35.9
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 1.7e-115 421.4 674 43.0
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 8.5e-115 419.1 868 35.7
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.1e-114 418.7 671 40.8
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 1.5e-114 418.3 864 35.1
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 5.7e-111 406.4 679 42.3
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 1.6e-108 398.3 898 34.6
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 9.5e-106 389.0 674 39.8
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 6.4e-102 376.3 671 39.2
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 4.6e-100 370.2 677 38.6
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 4.7e-97 360.1 584 40.9
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 6.2e-97 359.8 584 40.9
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 1.9e-93 348.2 617 39.2
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 2.1e-81 308.1 683 37.2
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-78 297.7 667 35.2
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 3.5e-76 290.8 815 32.8
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.7e-70 271.9 450 43.1
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 6.4e-62 243.4 151 84.1
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 2.4e-61 241.5 822 28.2
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 7.4e-58 229.9 467 34.0
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 6.4e-54 216.9 492 34.1
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 4.2e-53 214.2 123 94.3
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 3.4e-47 194.5 366 39.1
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 7.1e-45 186.8 310 38.1
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 6.9e-40 170.2 86 96.5
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 5.0e-38 164.1 847 25.6
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 1.4e-37 162.5 338 37.3
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.8e-35 155.6 208 44.7
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 1.9e-34 152.1 232 40.1
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 1.3e-33 149.4 256 38.7
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 1.8e-32 145.6 206 41.3
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 5.3e-32 144.1 159 50.9
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.2e-30 138.7 117 56.4
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 7.2e-29 133.7 196 43.4
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.0e-27 129.8 128 57.8
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 3.3e-26 124.8 253 36.0
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 2.3e-19 102.1 120 48.3
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 5.2e-19 100.9 119 48.7
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 2.0e-18 99.0 96 57.3
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.8e-17 95.1 153 39.2
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 4.5e-15 87.8 76 59.2
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.0e-14 86.7 159 37.1
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.9e-14 85.1 155 44.5
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 3.8e-14 84.7 76 57.9
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 2.7e-12 78.6 198 33.3
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 1.0e-11 76.6 112 39.3
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 5.2e-11 74.3 105 46.7
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 7.5e-10 70.5 68 52.9
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 2.4e-08 65.5 201 33.8
MBI13_g02371_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D000708 1.2e-07 63.2 47 66.0
Actinidia38716 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.5e-07 61.6 57 50.9
Oeu055964.1 Olea europaea HOM05D001574 ORTHO05D000708 1.7e-06 59.3 44 65.9
CBR_g27932 Chara braunii HOM05D000019 ORTHO05D000002 8.5e-06 57.0 313 24.6


User provided reference genes

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