Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29042 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 6.4e-113 410.6 187 100.0
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 5.9e-58 228.0 110 86.4
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 5.9e-58 228.0 110 88.2
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 1.3e-57 226.9 111 86.5
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 1.3e-57 226.9 110 88.2
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 2.2e-57 226.1 110 86.4
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 2.2e-57 226.1 110 85.5
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 2.2e-57 226.1 110 87.3
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 2.9e-57 225.7 110 86.4
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 2.9e-57 225.7 110 86.4
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 3.8e-57 225.3 111 85.6
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 5.0e-57 224.9 110 85.5
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 5.0e-57 224.9 110 87.3
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 5.0e-57 224.9 110 85.5
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 5.0e-57 224.9 110 86.4
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 5.0e-57 224.9 110 86.4
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 6.5e-57 224.6 110 85.5
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 6.5e-57 224.6 110 85.5
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 8.5e-57 224.2 110 84.5
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 8.5e-57 224.2 110 84.5
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 1.1e-56 223.8 110 84.5
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 1.5e-56 223.4 110 83.6
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 1.5e-56 223.4 110 86.4
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 1.9e-56 223.0 110 86.4
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 1.9e-56 223.0 110 84.5
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 2.5e-56 222.6 110 84.5
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 2.5e-56 222.6 110 84.5
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 3.2e-56 222.2 110 86.4
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 3.2e-56 222.2 110 84.5
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 3.2e-56 222.2 110 86.4
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 4.2e-56 221.9 113 82.3
Cfa013356 Carpinus fangiana HOM05D005302 ORTHO05D006422 4.2e-56 221.9 110 85.5
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 4.2e-56 221.9 110 83.6
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 4.2e-56 221.9 110 84.5
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 7.2e-56 221.1 110 85.5
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 7.2e-56 221.1 111 83.8
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 9.4e-56 220.7 110 80.9
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 9.4e-56 220.7 110 82.7
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 9.4e-56 220.7 110 85.5
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 1.2e-55 220.3 110 84.5
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 1.2e-55 220.3 110 85.5
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 1.2e-55 220.3 110 84.5
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 1.2e-55 220.3 110 84.5
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 1.6e-55 219.9 110 82.7
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 2.1e-55 219.5 110 85.5
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 2.1e-55 219.5 110 82.7
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 2.7e-55 219.2 110 82.7
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 3.6e-55 218.8 110 82.7
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 6.1e-55 218.0 110 81.8
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 6.1e-55 218.0 110 81.8
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 6.1e-55 218.0 110 83.6
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 6.1e-55 218.0 110 83.6
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 6.1e-55 218.0 110 84.5
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 6.1e-55 218.0 110 84.5
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 8.0e-55 217.6 110 83.6
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 8.0e-55 217.6 110 83.6
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 8.0e-55 217.6 110 82.7
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 1.0e-54 217.2 117 80.3
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 1.0e-54 217.2 110 81.8
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 1.0e-54 217.2 110 81.8
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 1.0e-54 217.2 110 81.8
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 1.4e-54 216.9 111 82.9
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 2.3e-54 216.1 110 84.5
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 2.3e-54 216.1 110 82.7
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 2.3e-54 216.1 111 82.0
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 2.3e-54 216.1 110 83.6
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 3.0e-54 215.7 110 82.7
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 3.0e-54 215.7 110 81.8
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 4.0e-54 215.3 110 80.0
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 4.0e-54 215.3 110 83.6
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 5.2e-54 214.9 110 83.6
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 5.2e-54 214.9 110 83.6
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 5.2e-54 214.9 110 83.6
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 6.8e-54 214.5 110 81.8
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 6.8e-54 214.5 110 81.8
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 6.8e-54 214.5 110 81.8
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 8.8e-54 214.2 110 81.8
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 8.8e-54 214.2 110 82.7
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 1.2e-53 213.8 111 81.1
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 1.2e-53 213.8 110 80.9
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.5e-53 213.4 110 80.9
Zm00001eb237270 Zea mays HOM05D005302 ORTHO05D006422 1.5e-53 213.4 110 81.8
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 2.6e-53 212.6 110 80.9
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 2.6e-53 212.6 110 80.9
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 4.4e-53 211.8 121 76.9
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 5.7e-53 211.5 110 80.0
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 5.7e-53 211.5 110 80.0
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 5.7e-53 211.5 110 80.9
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 5.7e-53 211.5 110 80.0
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 7.5e-53 211.1 112 78.6
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 9.8e-53 210.7 110 80.0
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 9.8e-53 210.7 110 78.2
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 1.7e-52 209.9 110 80.0
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 1.7e-52 209.9 110 80.0
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 1.7e-52 209.9 110 80.0
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 2.2e-52 209.5 121 76.0
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 3.7e-52 208.8 110 79.1
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 6.3e-52 208.0 130 70.8
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 8.3e-52 207.6 121 73.6
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.4e-51 206.8 110 79.1
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 1.8e-51 206.5 111 75.7
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 3.1e-51 205.7 110 80.0
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 3.1e-51 205.7 110 79.1
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 4.1e-51 205.3 110 80.0
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 4.1e-51 205.3 111 79.3
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 4.1e-51 205.3 111 79.3
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 7.0e-51 204.5 110 80.0
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 7.0e-51 204.5 110 78.2
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 2.0e-50 203.0 110 78.2
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 4.5e-50 201.8 131 68.7
Hma1.2p1_1884F.1_g306470 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 2.2e-49 199.5 110 78.2
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 2.2e-49 199.5 110 78.2
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 2.5e-48 196.1 110 80.9
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 5.5e-48 194.9 110 73.6
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 8.3e-44 181.0 112 69.6
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.2e-42 177.2 156 56.4
Cc07_g15020 Coffea canephora HOM05D005302 ORTHO05D006422 1.7e-41 173.3 85 82.4
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 3.3e-40 169.1 104 72.1
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 4.7e-39 165.2 124 61.3
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 9.8e-37 157.5 143 53.1
Lj7A704G81 Lonicera japonica HOM05D005302 ORTHO05D006422 5.4e-35 151.8 78 84.6
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 2.0e-29 133.3 164 46.3
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 7.5e-29 131.3 114 49.1
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 1.1e-22 110.9 80 60.0
CDE05G1694 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.9e-19 100.1 61 70.5
CDE05G2043 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.2e-10 70.9 32 75.0
Lj7A704G80 Lonicera japonica HOM05D005302 ORTHO05D006422 4.6e-10 68.9 34 73.5


User provided reference genes

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