Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 2.1e-132 475.7 247 100.0
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 3.0e-33 146.4 144 50.7
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 3.9e-33 146.0 143 50.3
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 6.6e-33 145.2 143 51.0
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 1.5e-32 144.1 143 50.3
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 1.9e-32 143.7 142 49.3
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 2.5e-32 143.3 159 46.5
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 5.6e-32 142.1 150 46.0
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 9.6e-32 141.4 159 44.0
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 9.6e-32 141.4 176 43.8
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 2.1e-31 140.2 165 44.2
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 2.8e-31 139.8 160 47.5
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 8.1e-31 138.3 181 42.0
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 1.1e-30 137.9 159 43.4
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 1.4e-30 137.5 160 46.2
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 3.1e-30 136.3 145 46.9
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 3.1e-30 136.3 179 41.3
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 4.0e-30 136.0 145 48.3
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 4.0e-30 136.0 145 47.6
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 5.3e-30 135.6 185 40.0
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 6.9e-30 135.2 146 46.6
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 1.2e-29 134.4 143 48.3
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 1.5e-29 134.0 159 42.8
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 2.0e-29 133.7 165 43.6
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 2.0e-29 133.7 157 42.7
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 2.0e-29 133.7 156 41.0
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 2.6e-29 133.3 163 44.2
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 2.6e-29 133.3 136 51.5
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 4.5e-29 132.5 143 46.2
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 4.5e-29 132.5 143 46.2
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 4.5e-29 132.5 143 46.2
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 7.6e-29 131.7 146 47.9
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 7.6e-29 131.7 178 41.6
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 2.9e-28 129.8 136 47.8
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 2.9e-28 129.8 173 42.2
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 3.8e-28 129.4 142 44.4
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 4.9e-28 129.0 136 47.8
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 4.9e-28 129.0 216 37.0
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 6.4e-28 128.6 147 46.9
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 6.4e-28 128.6 142 45.1
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 8.4e-28 128.3 146 46.6
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 8.4e-28 128.3 146 46.6
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 8.4e-28 128.3 147 46.3
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 1.1e-27 127.9 146 45.9
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 1.1e-27 127.9 150 46.0
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 1.4e-27 127.5 174 42.5
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 1.4e-27 127.5 136 48.5
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 1.4e-27 127.5 136 47.1
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 1.4e-27 127.5 145 45.5
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 2.4e-27 126.7 143 44.1
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 2.4e-27 126.7 203 37.9
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 2.4e-27 126.7 168 43.5
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 3.2e-27 126.3 147 44.9
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 3.2e-27 126.3 174 40.8
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 3.2e-27 126.3 144 44.4
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 3.2e-27 126.3 136 46.3
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 4.2e-27 125.9 136 44.9
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 4.2e-27 125.9 144 47.9
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 4.2e-27 125.9 158 43.7
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 5.5e-27 125.6 146 45.2
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 5.5e-27 125.6 147 45.6
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 7.1e-27 125.2 136 46.3
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 7.1e-27 125.2 157 40.1
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 9.3e-27 124.8 144 47.2
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 9.3e-27 124.8 136 47.8
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 1.2e-26 124.4 136 45.6
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 2.1e-26 123.6 146 44.5
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 2.1e-26 123.6 143 42.0
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 2.7e-26 123.2 147 46.3
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 2.7e-26 123.2 147 44.2
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 2.7e-26 123.2 147 44.2
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 2.7e-26 123.2 146 45.9
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 2.7e-26 123.2 156 40.4
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 3.5e-26 122.9 143 42.0
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 6.0e-26 122.1 154 44.8
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 6.0e-26 122.1 154 44.8
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 2.3e-25 120.2 152 44.7
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 8.7e-25 118.2 170 41.2
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 1.1e-24 117.9 136 44.9
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 1.5e-24 117.5 143 44.8
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.5e-24 117.5 141 44.0
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 4.3e-24 115.9 155 39.4
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 1.6e-23 114.0 136 40.4
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 4.8e-23 112.5 149 41.6
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 6.2e-23 112.1 154 40.9
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 6.2e-23 112.1 136 42.6
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 8.1e-23 111.7 138 39.1
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 6.9e-22 108.6 156 38.5
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 6.9e-22 108.6 136 41.9
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 9.0e-22 108.2 144 38.2
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 4.5e-21 105.9 153 40.5
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 7.6e-21 105.1 146 41.1
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 1.0e-20 104.8 182 37.4
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 1.0e-20 104.8 142 40.1
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 3.8e-20 102.8 140 42.9
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 1.9e-19 100.5 135 40.0
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 7.1e-19 98.6 160 35.6
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 1.0e-12 78.2 104 40.4
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 2.2e-12 77.0 102 37.3
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 2.2e-12 77.0 125 37.6
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 2.5e-11 73.6 91 37.4
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 1.0e-09 68.2 114 36.0
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 1.8e-09 67.4 155 32.9
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 1.9e-08 63.9 100 33.0


User provided reference genes

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