Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28945 Sequoiadendron giganteum HOM05D055905 ORTHO05D003711 1.7e-91 339.3 176 100.0
SEGI_22331 Sequoiadendron giganteum HOM05D055905 ORTHO05D003711 2.2e-38 162.9 134 70.1
ATR0815G070 Amborella trichopoda HOM05D003271 ORTHO05D003711 5.6e-10 68.6 108 38.9
Duzib150G0873 Durio zibethinus HOM05D003271 ORTHO05D003711 9.6e-10 67.8 128 36.7
Dinv36574 Davidia involucrata HOM05D003271 ORTHO05D003711 1.6e-09 67.0 109 41.3
Duzib168G0501 Durio zibethinus HOM05D003271 ORTHO05D003711 1.6e-09 67.0 101 46.5
Cpa.g.c33360.2 Carica papaya HOM05D003271 ORTHO05D003711 2.1e-09 66.6 105 41.9
CiPaw.04G169100 Carya illinoinensis HOM05D003271 ORTHO05D003711 2.8e-09 66.2 123 37.4
Hma1.2p1_0665F.1_g199290 Hydrangea macrophylla HOM05D003271 ORTHO05D003711 3.7e-09 65.9 100 43.0
Rhsim01G0085500 Rhododendron simsii HOM05D003271 ORTHO05D003711 3.7e-09 65.9 96 43.8
RhsimUnG0081200 Rhododendron simsii HOM05D003271 ORTHO05D003711 3.7e-09 65.9 96 43.8
PGSC0003DMG400024486 Solanum tuberosum HOM05D003271 ORTHO05D003711 3.7e-09 65.9 103 40.8
Solyc03g114100.1 Solanum lycopersicum HOM05D003271 ORTHO05D003711 4.8e-09 65.5 97 43.3
Sopen03g033160 Solanum pennellii HOM05D003271 ORTHO05D003711 4.8e-09 65.5 97 43.3
Thecc.09G120200 Theobroma cacao HOM05D003271 ORTHO05D003711 4.8e-09 65.5 104 41.3
Rhsim01G0080300 Rhododendron simsii HOM05D003271 ORTHO05D003711 6.2e-09 65.1 103 41.7
RhsimUnG0155900 Rhododendron simsii HOM05D003271 ORTHO05D003711 6.2e-09 65.1 103 41.7
Sabra03G0034300 Salix brachista HOM05D003271 ORTHO05D003711 6.2e-09 65.1 130 35.4
Ciclev10009900m.g Citrus clementina HOM05D003271 ORTHO05D003711 8.1e-09 64.7 100 43.0
Dinv41545 Davidia involucrata HOM05D001746 ORTHO05D001823 8.1e-09 64.7 107 40.2
Nitab4.5_0022569g0020 Nicotiana tabacum HOM05D003271 ORTHO05D003711 8.1e-09 64.7 95 43.2
TAR625G1039 Trochodendron aralioides HOM05D003271 ORTHO05D003711 8.1e-09 64.7 128 35.9
Cfa003329 Carpinus fangiana HOM05D003271 ORTHO05D003711 1.1e-08 64.3 136 32.4
Nitab4.5_0008019g0010 Nicotiana tabacum HOM05D003271 ORTHO05D003711 1.1e-08 64.3 95 46.3
Glyma.07G032900 Glycine max HOM05D003271 ORTHO05D003711 1.4e-08 63.9 101 41.6
Rhsim01G0082300 Rhododendron simsii HOM05D003271 ORTHO05D003711 1.4e-08 63.9 96 40.6
Aa31LG8G2840 Aethionema arabicum HOM05D003271 ORTHO05D003711 1.8e-08 63.5 125 35.2
Glyma.08G209300 Glycine max HOM05D003271 ORTHO05D003711 1.8e-08 63.5 101 43.6
Manes.14G128700 Manihot esculenta HOM05D003271 ORTHO05D003711 1.8e-08 63.5 103 43.7
Potri.001G174300 Populus trichocarpa HOM05D003271 ORTHO05D003711 1.8e-08 63.5 142 34.5
CiPaw.03G239700 Carya illinoinensis HOM05D003271 ORTHO05D003711 2.4e-08 63.2 94 40.4
QL02p087319 Quercus lobata HOM05D003271 ORTHO05D003711 2.4e-08 63.2 103 38.8
Sabra01G0137700 Salix brachista HOM05D003271 ORTHO05D003711 2.4e-08 63.2 130 36.2
Cc06_g08980 Coffea canephora HOM05D003271 ORTHO05D003711 3.1e-08 62.8 100 43.0
Hma1.2p1_0018F.1_g012840 Hydrangea macrophylla HOM05D003271 ORTHO05D003711 3.1e-08 62.8 108 40.7
Oeu014846.1 Olea europaea HOM05D003271 ORTHO05D003711 3.1e-08 62.8 96 43.8
RhsimUnG0239400 Rhododendron simsii HOM05D003271 ORTHO05D003711 3.1e-08 62.8 96 39.6
Actinidia22016 Actinidia chinensis HOM05D003271 ORTHO05D003711 4.0e-08 62.4 100 42.0
Cc04_g03880 Coffea canephora HOM05D003271 ORTHO05D003711 4.0e-08 62.4 101 43.6
Atru.chr1.3146 Acer truncatum HOM05D003271 ORTHO05D003711 5.3e-08 62.0 106 42.5
CsaV3_7G032760 Cucumis sativus L. HOM05D003271 ORTHO05D003711 6.9e-08 61.6 96 38.5
Gohir.A13G198700 Gossypium hirsutum HOM05D003271 ORTHO05D003711 6.9e-08 61.6 96 42.7
Manes.06G050300 Manihot esculenta HOM05D003271 ORTHO05D003711 6.9e-08 61.6 101 41.6
CsaV3_1G029660 Cucumis sativus L. HOM05D003271 ORTHO05D003711 9.0e-08 61.2 139 33.8
Potri.003G059900 Populus trichocarpa HOM05D003271 ORTHO05D003711 9.0e-08 61.2 111 40.5
Prupe.7G237500 Prunus persica HOM05D003271 ORTHO05D003711 9.0e-08 61.2 107 42.1
Cpa.g.sc75.63 Carica papaya HOM05D003271 ORTHO05D003711 1.2e-07 60.8 94 43.6
Haze_25631 Corylus avellana HOM05D003271 ORTHO05D003711 1.2e-07 60.8 136 31.6
Gorai.013G232900 Gossypium raimondii HOM05D003271 ORTHO05D003711 1.2e-07 60.8 96 44.8
Manes.04G118400 Manihot esculenta HOM05D003271 ORTHO05D003711 1.2e-07 60.8 108 41.7
Phvul.010G153100 Phaseolus vulgaris HOM05D003271 ORTHO05D003711 1.2e-07 60.8 107 43.0
Rhsim01G0082700 Rhododendron simsii HOM05D003271 ORTHO05D003711 1.2e-07 60.8 96 41.7
RcHm_v2.0_Chr2g0136881 Rosa chinensis HOM05D003271 ORTHO05D003711 1.2e-07 60.8 101 41.6
TWI18G1055 Tripterygium wilfordii HOM05D003271 ORTHO05D003711 1.2e-07 60.8 125 35.2
Ca_21708_v3 Cicer arietinum L. HOM05D003271 ORTHO05D003711 1.5e-07 60.5 107 37.4
ClCG09G002560 Citrullus lanatus HOM05D003271 ORTHO05D003711 1.5e-07 60.5 101 40.6
Duzib235G0804 Durio zibethinus HOM05D003271 ORTHO05D003711 1.5e-07 60.5 96 40.6
Eucgr.C04164 Eucalyptus grandis HOM05D003271 ORTHO05D003711 1.5e-07 60.5 97 42.3
Rhsim01G0081200 Rhododendron simsii HOM05D003271 ORTHO05D003711 1.5e-07 60.5 96 38.5
VMungo0331G1721 Vigna mungo HOM05D001432 ORTHO05D009001 1.5e-07 60.5 100 40.0
Aqoxy7G02034 Aquilegia oxysepala HOM05D003271 ORTHO05D003711 2.0e-07 60.1 101 40.6
Gohir.D13G204100 Gossypium hirsutum HOM05D003271 ORTHO05D003711 2.0e-07 60.1 96 44.8
RcHm_v2.0_Chr2g0089411 Rosa chinensis HOM05D003271 ORTHO05D003711 2.0e-07 60.1 103 38.8
CDE03G0311 Ceratophyllum demersum HOM05D003271 ORTHO05D003711 2.6e-07 59.7 103 37.9
ClCG06G010770 Citrullus lanatus HOM05D003271 ORTHO05D003711 2.6e-07 59.7 128 34.4
Haze_16503 Corylus avellana HOM05D003271 ORTHO05D003711 2.6e-07 59.7 100 39.0
Nn8g39362 Nelumbo nucifera HOM05D003271 ORTHO05D003711 2.6e-07 59.7 107 38.3
CiPaw.01G243500 Carya illinoinensis HOM05D003271 ORTHO05D003711 4.5e-07 58.9 109 35.8
CiPaw.02G154100 Carya illinoinensis HOM05D003271 ORTHO05D003711 4.5e-07 58.9 102 37.3
Rhsim01G0083300 Rhododendron simsii HOM05D003271 ORTHO05D003711 4.5e-07 58.9 96 41.7
TWI75G0688 Tripterygium wilfordii HOM05D003271 ORTHO05D003711 4.5e-07 58.9 101 39.6
TAR636G1552 Trochodendron aralioides HOM05D001746 ORTHO05D001823 4.5e-07 58.9 100 37.0
EL10Ac8g18586 Beta vulgaris HOM05D003271 ORTHO05D003711 5.8e-07 58.5 94 40.4
MELO3C023390.2 Cucumis melo HOM05D003271 ORTHO05D003711 5.8e-07 58.5 95 40.0
Duzib160G0335 Durio zibethinus HOM05D003271 ORTHO05D003711 5.8e-07 58.5 131 34.4
PGR142G0243 Punica granatum HOM05D003271 ORTHO05D003711 5.8e-07 58.5 100 41.0
Sed0021298 Sechium edule HOM05D003271 ORTHO05D003711 5.8e-07 58.5 95 40.0
TWI32G0109 Tripterygium wilfordii HOM05D003271 ORTHO05D003711 5.8e-07 58.5 104 40.4
CANSAT56G3027 Cannabis sativa HOM05D003271 ORTHO05D003711 7.6e-07 58.2 115 36.5
CDE01G0577 Ceratophyllum demersum HOM05D003271 ORTHO05D003711 9.9e-07 57.8 103 35.9
COL.COLO4_12873 Corchorus olitorius HOM05D003271 ORTHO05D003711 9.9e-07 57.8 96 35.4
FvH4_1g03940 Fragaria vesca HOM05D003271 ORTHO05D003711 9.9e-07 57.8 103 37.9
FAN19G3144 Fragaria x ananassa HOM05D003271 ORTHO05D003711 9.9e-07 57.8 103 37.9
Gohir.D06G056600 Gossypium hirsutum HOM05D003271 ORTHO05D003711 9.9e-07 57.8 99 37.4
Gorai.010G066300 Gossypium raimondii HOM05D003271 ORTHO05D003711 9.9e-07 57.8 99 37.4
Sc18g0000850 Simmondsia chinensis HOM05D003271 ORTHO05D003711 9.9e-07 57.8 104 37.5
AL3G28270 Arabidopsis lyrata HOM05D003271 ORTHO05D003711 1.3e-06 57.4 94 41.5
PSO170G2560 Papaver somniferum HOM05D003271 ORTHO05D003711 1.3e-06 57.4 116 33.6
MBI04_g29848_MAGBIO Magnolia biondii HOM05D003271 ORTHO05D003711 1.7e-06 57.0 100 41.0
MD15G1177900 Malus domestica HOM05D003271 ORTHO05D003711 1.7e-06 57.0 107 35.5
CANSAT56G0897 Cannabis sativa HOM05D003271 ORTHO05D003711 2.2e-06 56.6 93 43.0
FAN26G0847 Fragaria x ananassa HOM05D003271 ORTHO05D003711 2.2e-06 56.6 103 37.9
HanXRQChr09g0240721 Helianthus annuus HOM05D003271 ORTHO05D003711 2.2e-06 56.6 112 38.4
Medtr4g113600 Medicago truncatula HOM05D003271 ORTHO05D003711 2.2e-06 56.6 103 39.8
Gohir.D05G125500 Gossypium hirsutum HOM05D003271 ORTHO05D003711 2.9e-06 56.2 99 38.4
Gohir.D10G074200 Gossypium hirsutum HOM05D003271 ORTHO05D003711 2.9e-06 56.2 96 39.6
PSO455G0107 Papaver somniferum HOM05D003271 ORTHO05D003711 2.9e-06 56.2 96 37.5
Rhsim01G0084300 Rhododendron simsii HOM05D003271 ORTHO05D003711 2.9e-06 56.2 96 39.6
unitig_60.g25607 Utricularia gibba HOM05D003271 ORTHO05D003711 2.9e-06 56.2 96 39.6
Atru.chr7.1240 Acer truncatum HOM05D003271 ORTHO05D003711 3.8e-06 55.8 106 39.6
ATR0661G472 Amborella trichopoda HOM05D003271 ORTHO05D038335 3.8e-06 55.8 123 32.5
AUR62011067 Chenopodium quinoa HOM05D003271 ORTHO05D003711 3.8e-06 55.8 95 41.1
MELO3C026630.2 Cucumis melo HOM05D003271 ORTHO05D003711 3.8e-06 55.8 103 38.8
Gorai.009G129500 Gossypium raimondii HOM05D003271 ORTHO05D003711 3.8e-06 55.8 99 38.4
Rhsim01G0086100 Rhododendron simsii HOM05D003271 ORTHO05D003711 3.8e-06 55.8 104 37.5
Gohir.A10G077400 Gossypium hirsutum HOM05D003271 ORTHO05D003711 4.9e-06 55.5 96 38.5
HanXRQChr03g0062121 Helianthus annuus HOM05D003271 ORTHO05D003711 4.9e-06 55.5 103 37.9
Prupe.3G078300 Prunus persica HOM05D003271 ORTHO05D003711 4.9e-06 55.5 100 42.0
Actinidia15805 Actinidia chinensis HOM05D003271 ORTHO05D003711 6.4e-06 55.1 96 37.5
Gorai.011G080000 Gossypium raimondii HOM05D003271 ORTHO05D003711 6.4e-06 55.1 96 41.7
MD17G1203000 Malus domestica HOM05D003271 ORTHO05D003711 6.4e-06 55.1 103 41.7
Phvul.003G160900 Phaseolus vulgaris HOM05D003271 ORTHO05D003711 6.4e-06 55.1 129 34.1
SGA_v2.0_scaffold5G02649 Striga asiatica HOM05D003271 ORTHO05D003711 6.4e-06 55.1 101 36.6
AUR62033447 Chenopodium quinoa HOM05D003271 ORTHO05D003711 8.4e-06 54.7 94 40.4
Peaxi162Scf00361g00062 Petunia axillaris HOM05D003271 ORTHO05D003711 8.4e-06 54.7 95 35.8
PGR102G1800 Punica granatum HOM05D003271 ORTHO05D003711 8.4e-06 54.7 99 39.4


User provided reference genes

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