Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28928 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 8.2e-213 743.4 369 100.0
SalBow1G4350 Salvia bowleyana HOM05D005075 ORTHO05D007097 5.7e-97 358.6 355 53.0
SalBow1G5463 Salvia bowleyana HOM05D005075 ORTHO05D007097 7.5e-97 358.2 355 53.0
Lj3g0026022 Lotus japonicus HOM05D005075 ORTHO05D007097 2.2e-96 356.7 352 51.7
Phvul.001G259800 Phaseolus vulgaris HOM05D005075 ORTHO05D007097 3.1e-95 352.8 351 53.3
VMungo1383G1024 Vigna mungo HOM05D005075 ORTHO05D007097 4.1e-95 352.4 356 53.4
GSVIVG01010340001 Vitis vinifera HOM05D005075 ORTHO05D007097 1.2e-94 350.9 352 51.4
arahy.Tifrunner.gnm1.ann1.S726NC Arachis hypogaea HOM05D005075 ORTHO05D007097 2.0e-94 350.1 353 52.4
MBI08_g36442_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 4.5e-94 349.0 357 53.2
Oeu056679.1 Olea europaea HOM05D005075 ORTHO05D007097 1.0e-93 347.8 352 51.4
Ca_16480_v3 Cicer arietinum L. HOM05D005075 ORTHO05D007097 1.7e-93 347.1 354 50.8
QL03p054705 Quercus lobata HOM05D005075 ORTHO05D007097 1.7e-93 347.1 354 51.1
Manes.13G016100 Manihot esculenta HOM05D005075 ORTHO05D007097 2.2e-93 346.7 352 50.3
Hma1.2p1_0167F.1_g073740 Hydrangea macrophylla HOM05D005075 ORTHO05D007097 5.0e-93 345.5 354 51.1
Duzib251G0605 Durio zibethinus HOM05D005075 ORTHO05D007097 6.5e-93 345.1 354 51.1
Psat5g094520 Pisum sativum HOM05D005075 ORTHO05D007097 1.1e-92 344.4 354 50.6
Ciclev10030830m.g Citrus clementina HOM05D005075 ORTHO05D007097 4.2e-92 342.4 352 52.3
Glyma.11G248400 Glycine max HOM05D005075 ORTHO05D007097 4.2e-92 342.4 355 52.4
Nn4g22400 Nelumbo nucifera HOM05D005075 ORTHO05D007097 9.4e-92 341.3 352 50.9
Peaxi162Scf00804g00120 Petunia axillaris HOM05D005075 ORTHO05D007097 9.4e-92 341.3 351 51.9
Migut.K00700 Erythranthe guttata HOM05D005075 ORTHO05D007097 1.2e-91 340.9 352 52.8
TPR.G492 Trifolium pratense HOM05D005075 ORTHO05D007097 1.2e-91 340.9 355 50.1
Nitab4.5_0001802g0060 Nicotiana tabacum HOM05D005075 ORTHO05D007097 2.1e-91 340.1 351 52.1
Haze_12371 Corylus avellana HOM05D005075 ORTHO05D007097 3.6e-91 339.3 352 48.9
Gohir.A03G128400 Gossypium hirsutum HOM05D005075 ORTHO05D007097 3.6e-91 339.3 354 50.6
CANSAT01G2132 Cannabis sativa HOM05D005075 ORTHO05D007097 4.7e-91 339.0 351 48.4
MELO3C018283.2 Cucumis melo HOM05D005075 ORTHO05D007097 4.7e-91 339.0 358 50.8
Lj3A1065G86 Lonicera japonica HOM05D005075 ORTHO05D007097 6.1e-91 338.6 354 52.0
Aqoxy3G01457 Aquilegia oxysepala HOM05D005075 ORTHO05D007097 1.0e-90 337.8 356 50.3
CDE02G1220 Ceratophyllum demersum HOM05D005075 ORTHO05D007097 1.8e-90 337.0 356 52.0
Gohir.D02G152200 Gossypium hirsutum HOM05D005075 ORTHO05D007097 2.3e-90 336.7 354 50.0
Gorai.005G171200 Gossypium raimondii HOM05D005075 ORTHO05D007097 3.0e-90 336.3 354 49.7
Potri.008G178400 Populus trichocarpa HOM05D005075 ORTHO05D007097 3.0e-90 336.3 353 50.1
CsaV3_5G015350 Cucumis sativus L. HOM05D005075 ORTHO05D007097 4.0e-90 335.9 353 50.4
FAN07G0914 Fragaria x ananassa HOM05D005075 ORTHO05D007097 5.2e-90 335.5 361 47.9
FAN12G0151 Fragaria x ananassa HOM05D005075 ORTHO05D007097 6.8e-90 335.1 361 47.6
PGSC0003DMG400022618 Solanum tuberosum HOM05D005075 ORTHO05D007097 6.8e-90 335.1 351 50.7
Dinv14804 Davidia involucrata HOM05D005075 ORTHO05D007097 8.8e-90 334.7 352 49.7
Prupe.1G232900 Prunus persica HOM05D005075 ORTHO05D007097 8.8e-90 334.7 364 49.2
Hund25442 Selenicereus undatus HOM05D005075 ORTHO05D007097 8.8e-90 334.7 363 49.9
Solyc05g006810.4 Solanum lycopersicum HOM05D005075 ORTHO05D007097 1.2e-89 334.3 351 51.0
Sopen05g002750 Solanum pennellii HOM05D005075 ORTHO05D007097 1.5e-89 334.0 351 51.0
ECA233G3670 Erigeron canadensis HOM05D005075 ORTHO05D007097 2.0e-89 333.6 359 51.8
MD13G1113200 Malus domestica HOM05D005075 ORTHO05D007097 2.0e-89 333.6 373 48.0
TPR.G22444 Trifolium pratense HOM05D005075 ORTHO05D007097 2.0e-89 333.6 357 48.7
FvH4_4g24220 Fragaria vesca HOM05D005075 ORTHO05D007097 4.4e-89 332.4 361 47.4
Thecc.02G274600 Theobroma cacao HOM05D005075 ORTHO05D007097 7.5e-89 331.6 354 49.2
COL.COLO4_23627 Corchorus olitorius HOM05D005075 ORTHO05D007097 9.8e-89 331.3 356 48.9
HanXRQChr08g0233581 Helianthus annuus HOM05D005075 ORTHO05D007097 9.8e-89 331.3 358 50.3
Nitab4.5_0002129g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 9.8e-89 331.3 351 51.3
ClCG06G008480 Citrullus lanatus HOM05D005075 ORTHO05D007097 1.7e-88 330.5 351 50.7
Sabra08G0136200 Salix brachista HOM05D005075 ORTHO05D007097 2.8e-88 329.7 373 48.0
TWI18G0401 Tripterygium wilfordii HOM05D005075 ORTHO05D007097 2.8e-88 329.7 357 47.9
Cc11_g16630 Coffea canephora HOM05D005075 ORTHO05D007097 3.7e-88 329.3 351 49.0
Rhsim12G0029800 Rhododendron simsii HOM05D005075 ORTHO05D007097 4.8e-88 328.9 352 48.6
Cpa.g.sc27.216 Carica papaya HOM05D005075 ORTHO05D007097 6.3e-88 328.6 360 50.0
Nitab4.5_0000537g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 8.3e-88 328.2 351 50.4
Lalb_Chr23g0277981 Lupinus albus HOM05D005075 ORTHO05D007097 1.1e-87 327.8 356 50.6
Eucgr.H04663 Eucalyptus grandis HOM05D005075 ORTHO05D007097 1.4e-87 327.4 359 49.3
Lsat_1_v5_gn_8_149841 Lactuca sativa HOM05D005075 ORTHO05D007097 2.4e-87 326.6 358 50.0
CSS0028948 Camellia sinensis var. sinensis HOM05D005075 ORTHO05D007097 4.1e-87 325.9 353 50.4
Sed0000829 Sechium edule HOM05D005075 ORTHO05D007097 4.1e-87 325.9 353 48.7
BraA07t28994Z Brassica rapa HOM05D005075 ORTHO05D007097 9.1e-87 324.7 354 49.2
PGR119G0347 Punica granatum HOM05D005075 ORTHO05D007097 9.1e-87 324.7 361 49.9
Medtr3g085660 Medicago truncatula HOM05D005075 ORTHO05D007097 1.2e-86 324.3 382 46.3
A07p12060 Brassica napus HOM05D005075 ORTHO05D007097 1.6e-86 323.9 354 49.2
PSO782G5362 Papaver somniferum HOM05D005075 ORTHO05D007097 2.0e-86 323.6 356 50.0
Carub.0001s2573 Capsella rubella HOM05D005075 ORTHO05D007097 5.9e-86 322.0 355 47.6
Thhalv10006951m.g Eutrema salsugineum HOM05D005075 ORTHO05D007097 5.9e-86 322.0 354 48.9
ATR0824G188 Amborella trichopoda HOM05D005075 ORTHO05D007097 1.0e-85 321.2 333 51.4
BolC7t42310H Brassica oleracea HOM05D005075 ORTHO05D007097 1.0e-85 321.2 354 48.6
BcaC06g35258 Brassica carinata HOM05D005075 ORTHO05D007097 2.9e-85 319.7 357 48.5
arahy.Tifrunner.gnm1.ann1.I0S54J Arachis hypogaea HOM05D005075 ORTHO05D007097 3.8e-85 319.3 352 48.9
C07p18000 Brassica napus HOM05D005075 ORTHO05D007097 3.8e-85 319.3 354 48.0
CARHR026760 Cardamine hirsuta HOM05D005075 ORTHO05D007097 8.6e-85 318.2 355 48.7
DCAR_024086 Daucus carota HOM05D005075 ORTHO05D007097 8.6e-85 318.2 353 48.7
THA.LOC104799053 Tarenaya hassleriana HOM05D005075 ORTHO05D007097 8.6e-85 318.2 354 48.3
AL1G40580 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 1.1e-84 317.8 357 50.1
AT1G24340 Arabidopsis thaliana HOM05D005075 ORTHO05D007097 1.1e-84 317.8 354 49.7
PSO063G5600 Papaver somniferum HOM05D005075 ORTHO05D007097 1.5e-84 317.4 356 49.7
Carub.0007s3241 Capsella rubella HOM05D005075 ORTHO05D007097 3.3e-84 316.2 355 47.3
unitig_747.g21130 Utricularia gibba HOM05D005075 ORTHO05D007097 4.2e-84 315.8 355 47.3
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 2.1e-83 313.5 354 49.2
Aa31LG7G9750 Aethionema arabicum HOM05D005075 ORTHO05D007097 2.8e-83 313.2 354 46.9
Sp1g23430 Schrenkiella parvula HOM05D005075 ORTHO05D007097 4.7e-83 312.4 358 48.6
Zm00001eb014870 Zea mays HOM05D005075 ORTHO05D007097 5.2e-82 308.9 359 47.6
AUR62005575 Chenopodium quinoa HOM05D005075 ORTHO05D007097 2.8e-80 303.1 359 46.8
Pp3c26_6380 Physcomitrium patens HOM05D005075 ORTHO05D007097 2.8e-80 303.1 361 45.7
RcHm_v2.0_Chr4g0431061 Rosa chinensis HOM05D005075 ORTHO05D007097 4.9e-80 302.4 354 46.6
EL10Ac6g13442 Beta vulgaris HOM05D005075 ORTHO05D007097 8.3e-80 301.6 355 47.9
Mapoly0042s0063 Marchantia polymorpha HOM05D005075 ORTHO05D007097 1.8e-79 300.4 330 47.3
Ah.03g133860 Amaranthus hybridus HOM05D005075 ORTHO05D007097 4.1e-79 299.3 357 46.8
SHI17941 Sapria himalayana HOM05D005075 ORTHO05D007097 1.6e-78 297.4 363 47.9
SGA_v2.0_scaffold14G07137 Striga asiatica HOM05D005075 ORTHO05D007097 2.7e-78 296.6 353 48.2
vmacro01083 Vaccinium macrocarpon HOM05D005075 ORTHO05D007097 5.9e-78 295.4 373 44.0
AUR62024155 Chenopodium quinoa HOM05D005075 ORTHO05D007097 1.0e-77 294.7 374 45.7
SMO356G0356 Selaginella moellendorffii HOM05D005075 ORTHO05D007097 1.0e-77 294.7 368 46.2
AagrBONN_evm.TU.Sc2ySwM_228.4178 Anthoceros agrestis HOM05D005075 ORTHO05D007097 1.7e-77 293.9 352 45.5
CiPaw.05G114800 Carya illinoinensis HOM05D005075 ORTHO05D007097 3.3e-68 263.1 304 46.7
Peaxi162Scf00634g00011 Petunia axillaris HOM05D005075 ORTHO05D007097 7.5e-65 251.9 350 42.6
CAN.G2246.1 Capsicum annuum HOM05D005075 ORTHO05D007097 1.3e-64 251.1 333 43.5
Sc11g0000650 Simmondsia chinensis HOM05D005075 ORTHO05D007097 2.3e-61 240.4 189 62.4
HPP92_001258 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.4e-58 231.1 311 46.0
Cfa009316 Carpinus fangiana HOM05D005075 ORTHO05D007097 4.2e-47 193.0 142 66.2
TAR374G0458 Trochodendron aralioides HOM05D005075 ORTHO05D007097 7.1e-47 192.2 153 64.7
Glyma.18G008800 Glycine max HOM05D005075 ORTHO05D007097 1.6e-46 191.0 143 66.4
SEGI_08672 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 6.0e-30 136.0 69 100.0
Actinidia30671 Actinidia chinensis HOM05D005075 ORTHO05D007097 2.5e-28 130.6 111 61.3
Cre14.g630895 Chlamydomonas reinhardtii HOM05D005075 ORTHO05D007097 1.6e-27 127.9 229 39.7
MD16G1112300 Malus domestica HOM05D005075 ORTHO05D007097 2.5e-23 114.0 103 55.3
Atru.chr12.1465 Acer truncatum HOM05D005075 ORTHO05D007097 9.6e-20 102.1 206 37.4
MCO06G130 Micromonas commoda HOM05D005075 ORTHO05D007097 1.3e-19 101.7 250 35.6
PRCOL_00001291 Prasinoderma coloniale HOM05D005075 ORTHO05D007097 6.1e-14 82.8 247 27.5
Atru.chr11.2265 Acer truncatum HOM05D005075 ORTHO05D007097 1.0e-13 82.0 217 30.0
CBR_g21048 Chara braunii HOM05D000019 ORTHO05D000002 6.3e-11 72.8 160 31.2
Cfa026038 Carpinus fangiana HOM05D005075 ORTHO05D007097 9.0e-10 68.9 354 24.3
HPP92_001243 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.2e-09 68.6 64 46.9
Atru.chr11.2251 Acer truncatum HOM05D005075 ORTHO05D007097 9.4e-07 58.9 46 54.3
HPP92_001259 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.6e-06 58.2 60 51.7
Atru.chr11.2253 Acer truncatum HOM05D005075 ORTHO05D007097 2.1e-06 57.8 46 54.3


User provided reference genes

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