Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 1.2e-67 259.6 125 100.0
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 4.4e-09 65.1 36 72.2
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 4.4e-09 65.1 36 72.2
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 4.4e-09 65.1 97 39.2
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 5.8e-09 64.7 46 58.7
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 5.8e-09 64.7 39 64.1
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 7.5e-09 64.3 59 54.2
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 7.5e-09 64.3 71 42.3
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 9.9e-09 63.9 58 51.7
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 9.9e-09 63.9 39 66.7
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 1.7e-08 63.2 33 72.7
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 1.7e-08 63.2 68 45.6
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 1.7e-08 63.2 34 70.6
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 2.2e-08 62.8 36 61.1
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 2.9e-08 62.4 53 54.7
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 2.9e-08 62.4 33 72.7
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 2.9e-08 62.4 33 72.7
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 3.7e-08 62.0 33 69.7
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 3.7e-08 62.0 56 48.2
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 3.7e-08 62.0 39 59.0
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 3.7e-08 62.0 71 39.4
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 4.9e-08 61.6 36 63.9
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 4.9e-08 61.6 32 71.9
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 4.9e-08 61.6 32 71.9
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 6.4e-08 61.2 94 37.2
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 6.4e-08 61.2 36 61.1
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 8.3e-08 60.8 34 67.6
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 1.1e-07 60.5 55 47.3
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 1.4e-07 60.1 74 40.5
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 1.4e-07 60.1 80 30.0
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 1.9e-07 59.7 55 47.3
ClCG09G001340 Citrullus lanatus HOM05D008314 ORTHO05D010369 2.4e-07 59.3 37 59.5
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 2.4e-07 59.3 51 54.9
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 3.2e-07 58.9 62 43.5
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 3.2e-07 58.9 55 45.5
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 4.1e-07 58.5 33 66.7
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 5.4e-07 58.2 58 44.8
CiPaw.01G212100 Carya illinoinensis HOM05D008314 ORTHO05D010369 5.4e-07 58.2 43 55.8
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 5.4e-07 58.2 32 65.6
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 7.1e-07 57.8 33 63.6
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 9.2e-07 57.4 55 49.1
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 1.6e-06 56.6 56 44.6
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 1.6e-06 56.6 74 36.5
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 2.1e-06 56.2 68 39.7
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 3.5e-06 55.5 49 46.9
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 4.6e-06 55.1 34 58.8
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 4.6e-06 55.1 64 40.6
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 6.0e-06 54.7 73 38.4
SEGI_18497 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 6.0e-06 54.7 33 60.6
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 6.0e-06 54.7 64 40.6


User provided reference genes

Program Settings