Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 2.1e-43 178.7 95 100.0
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 6.8e-18 94.0 55 89.1
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 5.7e-17 90.9 64 75.0
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 1.3e-16 89.7 67 76.1
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 1.3e-16 89.7 64 73.4
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 2.2e-16 89.0 54 85.2
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 2.2e-16 89.0 64 73.4
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 2.2e-16 89.0 55 83.6
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.2e-16 89.0 64 73.4
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.2e-16 89.0 64 73.4
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 2.2e-16 89.0 64 73.4
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 2.2e-16 89.0 64 73.4
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 2.2e-16 89.0 64 71.9
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 2.8e-16 88.6 55 83.6
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 2.8e-16 88.6 59 78.0
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 3.7e-16 88.2 57 80.7
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 3.7e-16 88.2 63 73.0
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 3.7e-16 88.2 57 80.7
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 3.7e-16 88.2 67 76.1
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 4.8e-16 87.8 68 67.6
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 4.8e-16 87.8 63 73.0
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 4.8e-16 87.8 55 81.8
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 4.8e-16 87.8 63 69.8
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 6.3e-16 87.4 57 78.9
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 6.3e-16 87.4 59 76.3
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 6.3e-16 87.4 57 78.9
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 6.3e-16 87.4 57 78.9
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 6.3e-16 87.4 59 76.3
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 6.3e-16 87.4 59 76.3
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 6.3e-16 87.4 55 81.8
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 8.3e-16 87.0 67 67.2
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 8.3e-16 87.0 64 73.4
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 8.3e-16 87.0 63 73.0
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 8.3e-16 87.0 59 76.3
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 8.3e-16 87.0 67 71.6
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 1.1e-15 86.7 63 69.8
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 1.1e-15 86.7 59 76.3
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.1e-15 86.7 59 76.3
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.1e-15 86.7 59 76.3
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 1.1e-15 86.7 59 76.3
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 1.1e-15 86.7 59 76.3
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 1.4e-15 86.3 64 73.4
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 1.4e-15 86.3 66 69.7
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 1.4e-15 86.3 55 81.8
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.4e-15 86.3 63 71.4
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 1.4e-15 86.3 56 78.6
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 1.8e-15 85.9 55 80.0
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 1.8e-15 85.9 68 69.1
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 1.8e-15 85.9 61 75.4
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.4e-15 85.5 55 80.0
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.4e-15 85.5 55 80.0
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 2.4e-15 85.5 64 73.4
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 2.4e-15 85.5 55 78.2
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 2.4e-15 85.5 67 73.1
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 2.4e-15 85.5 63 71.4
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 2.4e-15 85.5 69 68.1
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.4e-15 85.5 54 75.9
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 3.1e-15 85.1 54 79.6
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 3.1e-15 85.1 56 78.6
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 3.1e-15 85.1 63 69.8
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 3.1e-15 85.1 59 72.9
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 3.1e-15 85.1 63 68.3
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 4.1e-15 84.7 65 67.7
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.1e-15 84.7 54 79.6
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.1e-15 84.7 54 79.6
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.1e-15 84.7 54 79.6
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 4.1e-15 84.7 60 75.0
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 4.1e-15 84.7 58 74.1
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 4.1e-15 84.7 65 70.8
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 4.1e-15 84.7 63 71.4
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 5.4e-15 84.3 63 66.7
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 5.4e-15 84.3 54 79.6
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 5.4e-15 84.3 55 80.0
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 5.4e-15 84.3 60 71.7
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 5.4e-15 84.3 67 70.1
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 5.4e-15 84.3 74 66.2
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 5.4e-15 84.3 63 68.3
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 9.1e-15 83.6 55 74.5
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 9.1e-15 83.6 57 73.7
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 9.1e-15 83.6 55 78.2
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 1.2e-14 83.2 59 69.5
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 1.2e-14 83.2 59 69.5
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 1.2e-14 83.2 59 69.5
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 1.2e-14 83.2 59 69.5
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 1.2e-14 83.2 59 69.5
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 1.2e-14 83.2 59 69.5
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 1.2e-14 83.2 68 66.2
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 1.6e-14 82.8 62 66.1
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 1.6e-14 82.8 68 66.2
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 2.0e-14 82.4 64 67.2
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 2.0e-14 82.4 60 68.3
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 2.7e-14 82.0 65 69.2
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 2.7e-14 82.0 60 70.0
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 2.7e-14 82.0 68 66.2
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 4.5e-14 81.3 70 65.7
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 4.5e-14 81.3 59 72.9
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 4.5e-14 81.3 55 78.2
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 5.9e-14 80.9 58 70.7
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 5.9e-14 80.9 64 65.6
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 5.9e-14 80.9 64 65.6
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 5.9e-14 80.9 63 65.1
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 5.9e-14 80.9 63 65.1
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 5.9e-14 80.9 63 65.1
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 5.9e-14 80.9 58 74.1
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 5.9e-14 80.9 63 65.1
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 7.7e-14 80.5 58 70.7
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 7.7e-14 80.5 61 65.6
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 7.7e-14 80.5 67 68.7
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.0e-13 80.1 55 72.7
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.0e-13 80.1 55 72.7
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.3e-13 79.7 64 64.1
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 1.3e-13 79.7 59 67.8
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 2.3e-13 79.0 61 65.6
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.3e-13 79.0 54 70.4
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 2.9e-13 78.6 53 73.6
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 5.0e-13 77.8 45 80.0
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 6.5e-13 77.4 60 70.0
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 1.5e-12 76.3 55 70.9
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 6.1e-11 70.9 39 82.1
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 5.7e-09 64.3 45 66.7
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 2.8e-08 62.0 49 63.3
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 7.0e-07 57.4 46 63.0
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 9.2e-07 57.0 62 50.0
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 2.7e-06 55.5 45 57.8
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 2.7e-06 55.5 45 57.8
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 2.7e-06 55.5 45 57.8
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 2.7e-06 55.5 40 65.0
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 3.5e-06 55.1 51 58.8


User provided reference genes

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