Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28822 Sequoiadendron giganteum HOM05D005369 ORTHO05D006955 8.0e-177 623.6 310 100.0
SEGI_22738 Sequoiadendron giganteum HOM05D005369 ORTHO05D006955 9.2e-40 168.3 224 42.0
CSS0041757 Camellia sinensis var. sinensis HOM05D005369 ORTHO05D006955 3.3e-37 159.8 225 42.7
Cpa.g.sc53.119 Carica papaya HOM05D005369 ORTHO05D006955 7.3e-37 158.7 253 39.5
THA.LOC104800064 Tarenaya hassleriana HOM05D005369 ORTHO05D006955 9.5e-37 158.3 230 40.9
QL01p001045 Quercus lobata HOM05D005369 ORTHO05D006955 2.1e-36 157.1 224 40.6
arahy.Tifrunner.gnm1.ann1.1BLX98 Arachis hypogaea HOM05D005369 ORTHO05D006955 4.7e-36 156.0 223 41.7
arahy.Tifrunner.gnm1.ann1.DD8P8M Arachis hypogaea HOM05D005369 ORTHO05D006955 4.7e-36 156.0 223 41.7
TPR.G18699 Trifolium pratense HOM05D005369 ORTHO05D006955 6.2e-36 155.6 219 42.5
Psat6g179520 Pisum sativum HOM05D005369 ORTHO05D006955 8.1e-36 155.2 224 42.4
Potri.010G130300 Populus trichocarpa HOM05D005369 ORTHO05D006955 1.4e-35 154.5 224 42.0
ATR0681G333 Amborella trichopoda HOM05D005369 ORTHO05D006955 1.8e-35 154.1 235 40.0
RcHm_v2.0_Chr4g0435941 Rosa chinensis HOM05D005369 ORTHO05D006955 1.8e-35 154.1 224 41.1
TAR374G0397 Trochodendron aralioides HOM05D005369 ORTHO05D006955 2.3e-35 153.7 220 42.7
GSVIVG01011963001 Vitis vinifera HOM05D000398 ORTHO05D000551 2.3e-35 153.7 223 41.3
MELO3C012211.2 Cucumis melo HOM05D005369 ORTHO05D006955 3.1e-35 153.3 229 43.2
TAR374G1244 Trochodendron aralioides HOM05D005369 ORTHO05D006955 3.1e-35 153.3 220 42.7
FAN22G1382 Fragaria x ananassa HOM05D005369 ORTHO05D006955 4.0e-35 152.9 224 40.2
CANSAT64G0649 Cannabis sativa HOM05D005369 ORTHO05D006955 5.2e-35 152.5 227 37.9
Atru.chr11.1367 Acer truncatum HOM05D005369 ORTHO05D006955 6.8e-35 152.1 224 40.6
Potri.008G115700 Populus trichocarpa HOM05D005369 ORTHO05D006955 8.9e-35 151.8 224 42.0
MD16G1049100 Malus domestica HOM05D005369 ORTHO05D006955 1.2e-34 151.4 224 42.0
CiPaw.15G002800 Carya illinoinensis HOM05D005369 ORTHO05D006955 1.5e-34 151.0 225 41.3
FvH4_4g28180 Fragaria vesca HOM05D005369 ORTHO05D006955 1.5e-34 151.0 224 39.7
FAN12G2281 Fragaria x ananassa HOM05D005369 ORTHO05D006955 1.5e-34 151.0 224 39.7
Sed0002723 Sechium edule HOM05D005369 ORTHO05D006955 1.5e-34 151.0 227 41.4
Ca_10520_v3 Cicer arietinum L. HOM05D005369 ORTHO05D006955 2.0e-34 150.6 220 42.3
Medtr1g093770 Medicago truncatula HOM05D005369 ORTHO05D006955 2.0e-34 150.6 225 40.4
MSTRG.7694 Avicennia marina HOM05D005369 ORTHO05D006955 2.6e-34 150.2 224 38.4
FAN07G1070 Fragaria x ananassa HOM05D005369 ORTHO05D006955 2.6e-34 150.2 216 39.4
Sabra08G0087600 Salix brachista HOM05D005369 ORTHO05D006955 2.6e-34 150.2 224 42.4
TWI31G0309 Tripterygium wilfordii HOM05D005369 ORTHO05D006955 2.6e-34 150.2 219 42.5
Actinidia14846 Actinidia chinensis HOM05D005369 ORTHO05D006955 3.4e-34 149.8 219 41.1
CsaV3_5G033930 Cucumis sativus L. HOM05D005369 ORTHO05D006955 3.4e-34 149.8 229 42.8
Manes.14G096800 Manihot esculenta HOM05D005369 ORTHO05D006955 3.4e-34 149.8 220 41.4
Phvul.003G026300 Phaseolus vulgaris HOM05D005369 ORTHO05D006955 4.4e-34 149.4 219 40.2
Eucgr.G02355 Eucalyptus grandis HOM05D005369 ORTHO05D006955 5.8e-34 149.1 218 40.4
Cfa018636 Carpinus fangiana HOM05D005369 ORTHO05D006955 7.5e-34 148.7 228 40.4
Hma1.2p1_0862F.1_g229880 Hydrangea macrophylla HOM05D005369 ORTHO05D006955 7.5e-34 148.7 240 37.9
CDE08G0426 Ceratophyllum demersum HOM05D005369 ORTHO05D006955 9.9e-34 148.3 218 39.4
Lalb_Chr02g0151791 Lupinus albus HOM05D005369 ORTHO05D006955 9.9e-34 148.3 219 42.0
Nn4g23711 Nelumbo nucifera HOM05D005369 ORTHO05D006955 9.9e-34 148.3 218 41.3
TAR622G0781 Trochodendron aralioides HOM05D005369 ORTHO05D006955 9.9e-34 148.3 225 39.1
TAR622G1222 Trochodendron aralioides HOM05D005369 ORTHO05D006955 9.9e-34 148.3 225 39.1
CDE09G0148 Ceratophyllum demersum HOM05D005369 ORTHO05D009095 1.7e-33 147.5 218 39.4
Glyma.02G100900 Glycine max HOM05D005369 ORTHO05D006955 1.7e-33 147.5 219 39.3
PGR119G0805 Punica granatum HOM05D005369 ORTHO05D006955 1.7e-33 147.5 220 40.0
VMungo1215G0010 Vigna mungo HOM05D005369 ORTHO05D006955 1.7e-33 147.5 219 40.2
Zm00001eb431600 Zea mays HOM05D005369 ORTHO05D006955 1.7e-33 147.5 219 39.7
Cc11_g10670 Coffea canephora HOM05D005369 ORTHO05D006955 2.2e-33 147.1 224 40.2
MD13G1047300 Malus domestica HOM05D005369 ORTHO05D006955 2.2e-33 147.1 224 40.6
Mapoly0084s0019 Marchantia polymorpha HOM05D005369 ORTHO05D006955 2.2e-33 147.1 238 37.8
HPP92_005307 Vanilla planifolia HOM05D005369 ORTHO05D006955 2.2e-33 147.1 218 40.8
vmacro11462 Vaccinium macrocarpon HOM05D005369 ORTHO05D006955 3.7e-33 146.4 197 41.6
A08p27110 Brassica napus HOM05D005369 ORTHO05D006955 4.9e-33 146.0 220 41.8
BraA08t34656Z Brassica rapa HOM05D005369 ORTHO05D006955 4.9e-33 146.0 220 41.8
SalBow8G4109 Salvia bowleyana HOM05D005369 ORTHO05D006955 4.9e-33 146.0 218 39.4
Haze_17433 Corylus avellana HOM05D005369 ORTHO05D006955 6.4e-33 145.6 209 41.1
Gohir.D12G174200 Gossypium hirsutum HOM05D005369 ORTHO05D006955 6.4e-33 145.6 224 40.6
Gorai.008G186900 Gossypium raimondii HOM05D005369 ORTHO05D006955 6.4e-33 145.6 224 40.6
Lalb_Chr21g0313361 Lupinus albus HOM05D005369 ORTHO05D006955 6.4e-33 145.6 223 38.6
AT1G25682 Arabidopsis thaliana HOM05D005369 ORTHO05D006955 8.3e-33 145.2 229 38.9
FAN17G2107 Fragaria x ananassa HOM05D005369 ORTHO05D006955 8.3e-33 145.2 224 38.4
Os02g0324300 Oryza sativa ssp. japonica HOM05D005369 ORTHO05D006955 8.3e-33 145.2 216 41.7
C05p24850 Brassica napus HOM05D005369 ORTHO05D006955 1.4e-32 144.4 224 39.3
Phvul.001G005600 Phaseolus vulgaris HOM05D005369 ORTHO05D006955 1.4e-32 144.4 224 39.7
DCAR_030087 Daucus carota HOM05D005369 ORTHO05D006955 1.9e-32 144.1 224 39.7
Gohir.A12G171800 Gossypium hirsutum HOM05D005369 ORTHO05D006955 1.9e-32 144.1 224 40.2
Glyma.01G089100 Glycine max HOM05D005369 ORTHO05D006955 2.4e-32 143.7 219 38.4
Rhsim09G0113000 Rhododendron simsii HOM05D005369 ORTHO05D006955 2.4e-32 143.7 236 39.0
Sp1g22610 Schrenkiella parvula HOM05D005369 ORTHO05D006955 2.4e-32 143.7 220 40.9
Ah.03g137930 Amaranthus hybridus HOM05D005369 ORTHO05D006955 3.2e-32 143.3 219 40.2
Carub.0001s2489 Capsella rubella HOM05D005369 ORTHO05D006955 3.2e-32 143.3 231 39.4
Prupe.1G304600 Prunus persica HOM05D005369 ORTHO05D006955 4.1e-32 142.9 225 40.4
Solyc05g009910.3 Solanum lycopersicum HOM05D005369 ORTHO05D006955 4.1e-32 142.9 224 39.7
Sopen05g005710 Solanum pennellii HOM05D005369 ORTHO05D006955 4.1e-32 142.9 224 39.7
BcaNung06366 Brassica carinata HOM05D005369 ORTHO05D006955 5.4e-32 142.5 220 40.9
ClCG05G023060 Citrullus lanatus HOM05D005369 ORTHO05D006955 5.4e-32 142.5 199 43.7
Ciclev10032187m.g Citrus clementina HOM05D005369 ORTHO05D006955 5.4e-32 142.5 224 40.2
HanXRQChr02g0043381 Helianthus annuus HOM05D005369 ORTHO05D006955 5.4e-32 142.5 224 37.9
PSO782G4917 Papaver somniferum HOM05D005369 ORTHO05D006955 5.4e-32 142.5 225 38.2
BolC3t19573H Brassica oleracea HOM05D005369 ORTHO05D006955 7.1e-32 142.1 221 40.3
BolC5t31214H Brassica oleracea HOM05D005369 ORTHO05D006955 7.1e-32 142.1 220 40.9
PGSC0003DMG400000806 Solanum tuberosum HOM05D005369 ORTHO05D006955 7.1e-32 142.1 224 39.7
Thecc.02G362000 Theobroma cacao HOM05D005369 ORTHO05D006955 7.1e-32 142.1 226 38.1
AL1G39700 Arabidopsis lyrata HOM05D005369 ORTHO05D006955 9.2e-32 141.7 231 39.0
A09p39670 Brassica napus HOM05D005369 ORTHO05D006955 9.2e-32 141.7 221 40.3
BraA09t39463Z Brassica rapa HOM05D005369 ORTHO05D006955 9.2e-32 141.7 221 40.3
Duzib251G0390 Durio zibethinus HOM05D005369 ORTHO05D006955 9.2e-32 141.7 219 39.7
BcaC05g26649 Brassica carinata HOM05D005369 ORTHO05D006955 1.6e-31 141.0 220 40.9
C03p72750 Brassica napus HOM05D005369 ORTHO05D006955 1.6e-31 141.0 221 39.8
Lj2g0009483 Lotus japonicus HOM05D005369 ORTHO05D006955 1.6e-31 141.0 224 36.6
PSO063G4132 Papaver somniferum HOM05D005369 ORTHO05D006955 1.6e-31 141.0 225 37.8
CAN.G184.84 Capsicum annuum HOM05D005369 ORTHO05D006955 2.1e-31 140.6 224 40.2
Migut.L01099 Erythranthe guttata HOM05D005369 ORTHO05D006955 2.1e-31 140.6 212 38.7
Thhalv10008252m.g Eutrema salsugineum HOM05D005369 ORTHO05D006955 2.1e-31 140.6 224 38.8
Nitab4.5_0011812g0010 Nicotiana tabacum HOM05D005369 ORTHO05D006955 2.1e-31 140.6 230 37.4
BcaB03g12082 Brassica carinata HOM05D005369 ORTHO05D006955 2.7e-31 140.2 223 39.9
DCAR_007223 Daucus carota HOM05D005369 ORTHO05D006955 3.5e-31 139.8 224 38.8
COL.COLO4_07861 Corchorus olitorius HOM05D005369 ORTHO05D006955 4.6e-31 139.4 224 37.9
SGA_v2.0_scaffold16G07883 Striga asiatica HOM05D005369 ORTHO05D006955 4.6e-31 139.4 225 36.9
unitig_744.g24076 Utricularia gibba HOM05D005369 ORTHO05D006955 6.0e-31 139.0 224 37.1
CARHR025850 Cardamine hirsuta HOM05D005369 ORTHO05D006955 1.0e-30 138.3 225 38.2
Duzib248G0106 Durio zibethinus HOM05D005369 ORTHO05D006955 1.0e-30 138.3 224 36.6
Sc11g0003050 Simmondsia chinensis HOM05D005369 ORTHO05D006955 1.0e-30 138.3 196 43.4
Nitab4.5_0005803g0060 Nicotiana tabacum HOM05D005369 ORTHO05D006955 1.3e-30 137.9 224 37.9
ECA246G2775 Erigeron canadensis HOM05D005369 ORTHO05D006955 1.7e-30 137.5 224 36.6
FAN26G1965 Fragaria x ananassa HOM05D005369 ORTHO05D006955 1.7e-30 137.5 228 35.5
FAN28G2319 Fragaria x ananassa HOM05D005369 ORTHO05D006955 3.0e-30 136.7 224 35.7
Aa31LG7G8920 Aethionema arabicum HOM05D005369 ORTHO05D006955 5.1e-30 136.0 205 40.0
AUR62035293 Chenopodium quinoa HOM05D005369 ORTHO05D006955 5.1e-30 136.0 219 37.0
Lsat_1_v5_gn_3_58161 Lactuca sativa HOM05D005369 ORTHO05D006955 5.1e-30 136.0 218 39.4
AUR62002925 Chenopodium quinoa HOM05D005369 ORTHO05D006955 8.6e-30 135.2 223 35.9
Lj3A1020T60 Lonicera japonica HOM05D005369 ORTHO05D006955 8.6e-30 135.2 218 38.1
EL10Ac6g14509 Beta vulgaris HOM05D005369 ORTHO05D006955 1.9e-29 134.0 219 37.4
Actinidia16612 Actinidia chinensis HOM05D005369 ORTHO05D006955 2.5e-29 133.7 265 35.1
SMO353G0425 Selaginella moellendorffii HOM05D005369 ORTHO05D006955 9.5e-29 131.7 233 34.3
Pp3c18_5500 Physcomitrium patens HOM05D005369 ORTHO05D006955 8.1e-28 128.6 235 36.6
Aqoxy5G00581 Aquilegia oxysepala HOM05D005369 ORTHO05D006955 2.4e-27 127.1 186 41.4
AagrBONN_evm.TU.Sc2ySwM_362.2009 Anthoceros agrestis HOM05D005369 ORTHO05D006955 3.1e-27 126.7 237 35.4
Peaxi162Scf00367g00088 Petunia axillaris HOM05D005369 ORTHO05D006955 2.0e-26 124.0 224 37.5
Sabra10G0099400 Salix brachista HOM05D005369 ORTHO05D006955 2.9e-25 120.2 151 43.7
Hund05770 Selenicereus undatus HOM05D005369 ORTHO05D006955 7.1e-24 115.5 176 38.6
Dinv05803 Davidia involucrata HOM05D005369 ORTHO05D006955 6.2e-20 102.4 155 38.7
CBR_g16048 Chara braunii HOM05D005369 ORTHO05D006955 8.4e-17 92.0 209 30.1
FvH4_1g20000 Fragaria vesca HOM05D005369 ORTHO05D006955 5.4e-16 89.4 143 33.6
FAN19G0967 Fragaria x ananassa HOM05D002945 ORTHO05D003314 5.4e-16 89.4 143 33.6
Dinv16512 Davidia involucrata HOM05D005369 ORTHO05D006955 1.0e-14 85.1 82 43.9
FAN23G0001 Fragaria x ananassa HOM05D002945 ORTHO05D003314 5.1e-14 82.8 143 31.5
HanXRQChr17g0551311 Helianthus annuus HOM05D005369 ORTHO05D006955 5.1e-14 82.8 128 39.1
HanXRQChr14g0430991 Helianthus annuus HOM05D005369 ORTHO05D006955 1.9e-08 64.3 129 34.1
Lsat_1_v5_gn_6_27721 Lactuca sativa HOM05D005369 ORTHO05D006955 8.7e-06 55.5 51 51.0


User provided reference genes

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