Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28811 Sequoiadendron giganteum HOM05D006791 ORTHO05D008221 4.3e-107 391.3 200 100.0
Medtr1g095580 Medicago truncatula HOM05D006791 ORTHO05D008221 1.2e-35 154.1 112 62.5
arahy.Tifrunner.gnm1.ann1.86UM3X Arachis hypogaea HOM05D006791 ORTHO05D008221 2.0e-35 153.3 112 65.2
Haze_16919 Corylus avellana HOM05D006791 ORTHO05D008221 2.6e-35 152.9 155 51.6
AUR62027952 Chenopodium quinoa HOM05D006791 ORTHO05D008221 4.4e-35 152.1 136 55.1
GSVIVG01016310001 Vitis vinifera HOM05D006791 ORTHO05D008221 4.4e-35 152.1 136 55.9
Lj8A97G46 Lonicera japonica HOM05D006791 ORTHO05D008221 5.8e-35 151.8 136 58.1
Psat6g185200 Pisum sativum HOM05D006791 ORTHO05D008221 5.8e-35 151.8 112 62.5
Solyc02g062520.3 Solanum lycopersicum HOM05D006791 ORTHO05D008221 5.8e-35 151.8 143 53.1
Actinidia03042 Actinidia chinensis HOM05D006791 ORTHO05D008221 7.5e-35 151.4 136 58.1
arahy.Tifrunner.gnm1.ann1.7LH3TR Arachis hypogaea HOM05D002197 ORTHO05D008221 7.5e-35 151.4 116 62.1
CAN.G131.1 Capsicum annuum HOM05D006791 ORTHO05D008221 9.8e-35 151.0 112 65.2
Lalb_Chr06g0162211 Lupinus albus HOM05D006791 ORTHO05D008221 9.8e-35 151.0 112 62.5
TPR.G1805 Trifolium pratense HOM05D006791 ORTHO05D008221 9.8e-35 151.0 112 61.6
CSS0037701 Camellia sinensis var. sinensis HOM05D006791 ORTHO05D008221 1.7e-34 150.2 136 55.9
Ca_10581_v3 Cicer arietinum L. HOM05D006791 ORTHO05D008221 2.2e-34 149.8 112 61.6
ECA233G0118 Erigeron canadensis HOM05D000058 ORTHO05D008221 2.2e-34 149.8 136 56.6
PSO339G2849 Papaver somniferum HOM05D006791 ORTHO05D008221 2.2e-34 149.8 164 48.8
HanXRQChr08g0219631 Helianthus annuus HOM05D006791 ORTHO05D008221 3.7e-34 149.1 136 54.4
MBI14_g40667_MAGBIO Magnolia biondii HOM05D006791 ORTHO05D008221 3.7e-34 149.1 164 48.8
PSO384G4004 Papaver somniferum HOM05D006791 ORTHO05D008221 3.7e-34 149.1 146 52.1
Sp5g10000 Schrenkiella parvula HOM05D006791 ORTHO05D008221 3.7e-34 149.1 112 65.2
Carub.0005s1862 Capsella rubella HOM05D006791 ORTHO05D008221 4.9e-34 148.7 112 67.9
CSS0049359 Camellia sinensis var. sinensis HOM05D006791 ORTHO05D008221 8.3e-34 147.9 164 49.4
Aqoxy7G02243 Aquilegia oxysepala HOM05D006791 ORTHO05D008221 1.1e-33 147.5 112 63.4
AL5G32850 Arabidopsis lyrata HOM05D006791 ORTHO05D008221 1.1e-33 147.5 112 62.5
Nn2g10715 Nelumbo nucifera HOM05D006791 ORTHO05D008221 1.4e-33 147.1 136 56.6
CiPaw.01G274700 Carya illinoinensis HOM05D006791 ORTHO05D008221 1.8e-33 146.7 112 61.6
CDE09G0276 Ceratophyllum demersum HOM05D006791 ORTHO05D008221 1.8e-33 146.7 112 63.4
Glyma.20G178400 Glycine max HOM05D006791 ORTHO05D008221 1.8e-33 146.7 135 53.3
TAR633G1431 Trochodendron aralioides HOM05D006791 ORTHO05D008221 1.8e-33 146.7 152 50.0
AT3G52260 Arabidopsis thaliana HOM05D006791 ORTHO05D008221 2.4e-33 146.4 112 62.5
AUR62020760 Chenopodium quinoa HOM05D006791 ORTHO05D008221 2.4e-33 146.4 136 55.9
Sopen02g013520 Solanum pennellii HOM05D006791 ORTHO05D008221 3.2e-33 146.0 143 51.7
MD07G1176900 Malus domestica HOM05D006791 ORTHO05D008221 4.1e-33 145.6 125 56.0
Oeu033855.1 Olea europaea HOM05D006791 ORTHO05D008221 4.1e-33 145.6 166 48.2
Nitab4.5_0000233g0130 Nicotiana tabacum HOM05D006791 ORTHO05D008221 5.4e-33 145.2 136 53.7
SalBow3G2210 Salvia bowleyana HOM05D006791 ORTHO05D008221 5.4e-33 145.2 112 61.6
Cc02_g11450 Coffea canephora HOM05D006791 ORTHO05D008221 7.0e-33 144.8 164 45.7
CsaV3_5G025780 Cucumis sativus L. HOM05D006791 ORTHO05D008221 7.0e-33 144.8 112 59.8
Sabra08G0028900 Salix brachista HOM05D006791 ORTHO05D008221 7.0e-33 144.8 152 50.0
VMungo0720G1069 Vigna mungo HOM05D006791 ORTHO05D008221 7.0e-33 144.8 112 61.6
Aa31LG10G7360 Aethionema arabicum HOM05D006791 ORTHO05D008221 9.2e-33 144.4 167 51.5
ClCG09G020610 Citrullus lanatus HOM05D006791 ORTHO05D008221 9.2e-33 144.4 152 48.7
Phvul.007G093000 Phaseolus vulgaris HOM05D006791 ORTHO05D008221 1.2e-32 144.1 112 60.7
Sc20g0001960 Simmondsia chinensis HOM05D006791 ORTHO05D008221 1.2e-32 144.1 125 55.2
Duzib106G0039 Durio zibethinus HOM05D006791 ORTHO05D008221 1.6e-32 143.7 152 50.0
Lj5g0025337 Lotus japonicus HOM05D006791 ORTHO05D008221 1.6e-32 143.7 112 58.0
Manes.07G103500 Manihot esculenta HOM05D006791 ORTHO05D008221 1.6e-32 143.7 112 63.4
TWI15G0354 Tripterygium wilfordii HOM05D006791 ORTHO05D008221 1.6e-32 143.7 110 62.7
Thhalv10010446m.g Eutrema salsugineum HOM05D006791 ORTHO05D008221 2.0e-32 143.3 112 62.5
RcHm_v2.0_Chr1g0363851 Rosa chinensis HOM05D006791 ORTHO05D008221 2.0e-32 143.3 125 56.0
MELO3C002896.2 Cucumis melo HOM05D006791 ORTHO05D008221 2.7e-32 142.9 142 48.6
Potri.008G042000 Populus trichocarpa HOM05D006791 ORTHO05D008221 2.7e-32 142.9 166 46.4
QL08p056563 Quercus lobata HOM05D006791 ORTHO05D008221 2.7e-32 142.9 112 59.8
THA.LOC104802594 Tarenaya hassleriana HOM05D006791 ORTHO05D008221 2.7e-32 142.9 161 49.7
Thecc.10G070300 Theobroma cacao HOM05D006791 ORTHO05D008221 2.7e-32 142.9 152 48.7
Eucgr.G02814 Eucalyptus grandis HOM05D006791 ORTHO05D008221 4.6e-32 142.1 152 50.0
ATR0759G009 Amborella trichopoda HOM05D006791 ORTHO05D008221 6.0e-32 141.7 116 58.6
Cpa.g.sc466.9 Carica papaya HOM05D006791 ORTHO05D008221 6.0e-32 141.7 152 50.7
FvH4_7g19860 Fragaria vesca HOM05D006791 ORTHO05D008221 6.0e-32 141.7 125 55.2
FAN06G1214 Fragaria x ananassa HOM05D006791 ORTHO05D008221 6.0e-32 141.7 125 55.2
Gohir.D06G176900 Gossypium hirsutum HOM05D006791 ORTHO05D008221 6.0e-32 141.7 152 48.7
Gorai.010G204900 Gossypium raimondii HOM05D006791 ORTHO05D008221 6.0e-32 141.7 152 49.3
BraA03t13977Z Brassica rapa HOM05D006791 ORTHO05D008221 1.0e-31 141.0 136 53.7
Sed0012525 Sechium edule HOM05D006791 ORTHO05D008221 1.0e-31 141.0 112 58.9
Gohir.A06G178100 Gossypium hirsutum HOM05D006791 ORTHO05D008221 1.3e-31 140.6 152 49.3
A03p48770 Brassica napus HOM05D006791 ORTHO05D008221 1.7e-31 140.2 136 52.9
Dinv31358 Davidia involucrata HOM05D006791 ORTHO05D008221 1.7e-31 140.2 166 47.0
Hund22514 Selenicereus undatus HOM05D006791 ORTHO05D008221 1.7e-31 140.2 112 60.7
DCAR_019128 Daucus carota HOM05D006791 ORTHO05D008221 2.3e-31 139.8 112 59.8
Migut.F01766 Erythranthe guttata HOM05D006791 ORTHO05D008221 3.0e-31 139.4 164 46.3
Nitab4.5_0004081g0030 Nicotiana tabacum HOM05D006791 ORTHO05D008221 3.0e-31 139.4 141 51.8
Ah.10g032870 Amaranthus hybridus HOM05D006791 ORTHO05D008221 3.9e-31 139.0 110 58.2
C07p46860 Brassica napus HOM05D006791 ORTHO05D008221 3.9e-31 139.0 136 52.9
BolC7t45202H Brassica oleracea HOM05D006791 ORTHO05D008221 3.9e-31 139.0 136 52.9
SGA_v2.0_scaffold341G49357 Striga asiatica HOM05D006791 ORTHO05D008221 3.9e-31 139.0 164 47.6
FAN03G2469 Fragaria x ananassa HOM05D006791 ORTHO05D008221 5.0e-31 138.7 125 53.6
EL10Ac2g03590 Beta vulgaris HOM05D006791 ORTHO05D008221 6.6e-31 138.3 154 51.3
CANSAT56G4374 Cannabis sativa HOM05D006791 ORTHO05D008221 6.6e-31 138.3 112 60.7
Os03g0288500 Oryza sativa ssp. japonica HOM05D006791 ORTHO05D008221 8.6e-31 137.9 112 59.8
PGR142G3028 Punica granatum HOM05D006791 ORTHO05D008221 8.6e-31 137.9 136 52.2
unitig_747.g21478 Utricularia gibba HOM05D006791 ORTHO05D008221 1.5e-30 137.1 152 50.0
Lsat_1_v5_gn_8_20021 Lactuca sativa HOM05D006791 ORTHO05D008221 1.9e-30 136.7 136 52.2
Pp3c20_1270 Physcomitrium patens HOM05D006791 ORTHO05D008221 2.5e-30 136.3 128 50.8
RcHm_v2.0_Chr5g0046841 Rosa chinensis HOM05D006791 ORTHO05D008221 1.2e-29 134.0 112 57.1
Zm00001eb013230 Zea mays HOM05D006791 ORTHO05D008221 1.6e-29 133.7 115 58.3
MSTRG.371 Avicennia marina HOM05D006791 ORTHO05D008221 3.6e-29 132.5 128 54.7
SMO347G0025 Selaginella moellendorffii HOM05D006791 ORTHO05D008221 1.8e-28 130.2 140 48.6
Mapoly0002s0246 Marchantia polymorpha HOM05D006791 ORTHO05D008221 2.3e-28 129.8 155 45.8
CDE09G1017 Ceratophyllum demersum HOM05D006791 ORTHO05D008221 5.2e-28 128.6 94 67.0
AagrBONN_evm.TU.Sc2ySwM_344.689 Anthoceros agrestis HOM05D006791 ORTHO05D008221 2.0e-27 126.7 152 46.7
Prupe.2G215700 Prunus persica HOM05D006791 ORTHO05D008221 4.4e-27 125.6 126 53.2
Ciclev10033672m.g Citrus clementina HOM05D006791 ORTHO05D008221 1.7e-26 123.6 94 61.7
Peaxi162Scf00108g00912 Petunia axillaris HOM05D006791 ORTHO05D008221 3.2e-25 119.4 118 50.0
FAN01G2861 Fragaria x ananassa HOM05D002197 ORTHO05D008221 1.6e-24 117.1 108 51.9
FAN10G1968 Fragaria x ananassa HOM05D006791 ORTHO05D008221 1.6e-24 117.1 96 56.2
HPP92_001044 Vanilla planifolia HOM05D006791 ORTHO05D008221 1.7e-18 97.1 97 51.5
RcHm_v2.0_Chr2g0110391 Rosa chinensis HOM05D006791 ORTHO05D008221 8.3e-18 94.7 112 44.6
Atru.chr12.724 Acer truncatum HOM05D006791 ORTHO05D008221 9.5e-14 81.3 113 42.5
CARHR162020 Cardamine hirsuta HOM05D006791 ORTHO05D008221 2.8e-13 79.7 66 60.6
Cre16.g689100 Chlamydomonas reinhardtii HOM05D006791 ORTHO05D008221 2.4e-12 76.6 74 43.2
SEGI_14513 Sequoiadendron giganteum HOM05D006791 ORTHO05D008221 5.2e-12 75.5 51 82.4
COL.COLO4_23714 Corchorus olitorius HOM05D006791 ORTHO05D008221 1.2e-11 74.3 65 61.5
RcHm_v2.0_Chr2g0104231 Rosa chinensis HOM05D006791 ORTHO05D008221 3.2e-09 66.2 66 51.5
Zm00001eb333930 Zea mays HOM05D006791 ORTHO05D008221 1.6e-08 63.9 67 53.7
Zm00001eb364040 Zea mays HOM05D006791 ORTHO05D008221 2.3e-07 60.1 67 52.2
AagrBONN_evm.TU.Sc2ySwM_117.3893 Anthoceros agrestis HOM05D006791 ORTHO05D008221 8.7e-07 58.2 59 49.2


User provided reference genes

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