Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 1.0e-69 266.5 129 100.0
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 5.6e-23 111.3 86 68.6
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 5.6e-15 84.7 86 50.0
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 4.7e-14 81.6 83 48.2
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 6.2e-14 81.3 77 53.2
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 6.2e-14 81.3 85 47.1
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 6.2e-14 81.3 78 51.3
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 6.2e-14 81.3 78 52.6
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 8.0e-14 80.9 78 51.3
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 1.1e-13 80.5 82 48.8
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.4e-13 80.1 78 52.6
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 1.8e-13 79.7 78 52.6
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 1.8e-13 79.7 83 49.4
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 2.3e-13 79.3 84 47.6
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 2.3e-13 79.3 82 48.8
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 2.3e-13 79.3 88 45.5
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 3.1e-13 79.0 78 50.0
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 3.1e-13 79.0 78 52.6
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.1e-13 79.0 85 49.4
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 3.1e-13 79.0 94 42.6
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 4.0e-13 78.6 85 49.4
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 4.0e-13 78.6 85 49.4
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 4.0e-13 78.6 85 48.2
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 4.0e-13 78.6 83 45.8
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 4.0e-13 78.6 78 47.4
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 5.2e-13 78.2 85 47.1
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 5.2e-13 78.2 82 47.6
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 5.2e-13 78.2 91 46.2
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 6.8e-13 77.8 78 50.0
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 6.8e-13 77.8 78 50.0
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 6.8e-13 77.8 78 50.0
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 6.8e-13 77.8 78 50.0
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 6.8e-13 77.8 82 47.6
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 6.8e-13 77.8 78 50.0
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 8.9e-13 77.4 78 50.0
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 1.2e-12 77.0 81 49.4
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 1.5e-12 76.6 85 47.1
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 2.0e-12 76.3 78 48.7
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.0e-12 76.3 83 48.2
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.0e-12 76.3 83 48.2
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 2.0e-12 76.3 79 48.1
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 2.6e-12 75.9 82 46.3
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 2.6e-12 75.9 82 47.6
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 2.6e-12 75.9 78 47.4
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 2.6e-12 75.9 82 46.3
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.6e-12 75.9 77 49.4
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 3.4e-12 75.5 78 47.4
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 3.4e-12 75.5 94 43.6
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 3.4e-12 75.5 78 48.7
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 3.4e-12 75.5 82 45.1
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 3.4e-12 75.5 77 50.6
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 4.4e-12 75.1 78 48.7
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 4.4e-12 75.1 78 48.7
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 4.4e-12 75.1 88 47.7
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 5.8e-12 74.7 92 43.5
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 5.8e-12 74.7 83 45.8
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 5.8e-12 74.7 78 48.7
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 5.8e-12 74.7 78 50.0
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 5.8e-12 74.7 82 46.3
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 7.5e-12 74.3 82 46.3
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 7.5e-12 74.3 78 50.0
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 7.5e-12 74.3 78 50.0
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 7.5e-12 74.3 78 50.0
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 7.5e-12 74.3 78 46.2
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 7.5e-12 74.3 78 50.0
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 7.5e-12 74.3 78 47.4
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 9.8e-12 73.9 78 47.4
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 9.8e-12 73.9 77 49.4
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 1.3e-11 73.6 79 48.1
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 1.3e-11 73.6 82 46.3
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 1.3e-11 73.6 92 42.4
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 1.7e-11 73.2 78 50.0
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 1.7e-11 73.2 78 48.7
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 1.7e-11 73.2 78 50.0
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 1.7e-11 73.2 101 40.6
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 2.9e-11 72.4 84 45.2
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 2.9e-11 72.4 82 45.1
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 2.9e-11 72.4 89 42.7
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 3.7e-11 72.0 78 46.2
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 3.7e-11 72.0 78 46.2
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 4.9e-11 71.6 78 48.7
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 4.9e-11 71.6 82 45.1
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 6.4e-11 71.2 78 46.2
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 6.4e-11 71.2 78 48.7
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 6.4e-11 71.2 78 48.7
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 8.3e-11 70.9 86 45.3
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 1.1e-10 70.5 84 44.0
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 1.1e-10 70.5 78 46.2
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 1.4e-10 70.1 78 44.9
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 1.4e-10 70.1 79 48.1
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 2.4e-10 69.3 83 42.2
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 3.2e-10 68.9 78 47.4
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 1.2e-09 67.0 78 43.6
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 1.2e-09 67.0 82 42.7
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 1.2e-09 67.0 82 45.1
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 3.5e-09 65.5 81 39.5
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 4.6e-09 65.1 78 41.0
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.9e-08 62.0 74 45.9
Oeu030220.2 Olea europaea HOM05D006934 ORTHO05D008743 2.1e-06 56.2 58 50.0


User provided reference genes

Program Settings