Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28747 Sequoiadendron giganteum HOM05D000432 ORTHO05D006816 5.3e-167 590.9 288 100.0
SEGI_18601 Sequoiadendron giganteum HOM05D000432 ORTHO05D000320 3.2e-95 352.4 365 51.5
SEGI_13449 Sequoiadendron giganteum HOM05D005161 ORTHO05D006816 4.7e-38 162.5 216 42.1
SEGI_31520 Sequoiadendron giganteum HOM05D000432 ORTHO05D006816 2.3e-29 133.7 86 74.4
SEGI_05856 Sequoiadendron giganteum HOM05D000432 ORTHO05D006816 5.4e-26 122.5 376 29.8
SEGI_40663 Sequoiadendron giganteum HOM05D000432 ORTHO05D006816 3.5e-25 119.8 379 29.3
SEGI_03841 Sequoiadendron giganteum HOM05D000432 ORTHO05D006816 9.8e-20 101.7 315 28.9
Lj6C78G2 Lonicera japonica HOM05D000432 ORTHO05D000320 2.9e-11 73.6 317 23.3
Dinv33556 Davidia involucrata HOM05D000432 ORTHO05D000320 5.4e-10 69.3 284 25.0
Duzib235G0164 Durio zibethinus HOM05D000432 ORTHO05D000320 9.2e-10 68.6 297 22.2
Thecc.06G124300 Theobroma cacao HOM05D000432 ORTHO05D000320 1.2e-09 68.2 350 22.0
CSS0005665 Camellia sinensis var. sinensis HOM05D000432 ORTHO05D000320 1.6e-09 67.8 352 25.0
CSS0045548 Camellia sinensis var. sinensis HOM05D000432 ORTHO05D000320 1.0e-08 65.1 353 23.5
Cc03_g14720 Coffea canephora HOM05D000432 ORTHO05D000320 1.3e-08 64.7 297 23.2
Prupe.8G037600 Prunus persica HOM05D000432 ORTHO05D000320 3.0e-08 63.5 318 22.3
Thecc.06G124600 Theobroma cacao HOM05D000432 ORTHO05D000320 3.9e-08 63.2 321 21.2
GSVIVG01014456001 Vitis vinifera HOM05D000432 ORTHO05D000320 3.9e-08 63.2 294 22.8
QL05p003685 Quercus lobata HOM05D000432 ORTHO05D000320 5.1e-08 62.8 334 22.5
Duzib264G1101 Durio zibethinus HOM05D000432 ORTHO05D000320 6.6e-08 62.4 270 25.6
Hma1.2p1_1258F.1_g270870 Hydrangea macrophylla HOM05D000432 ORTHO05D000320 6.6e-08 62.4 315 25.7
Thecc.09G269900 Theobroma cacao HOM05D000432 ORTHO05D000320 1.1e-07 61.6 297 22.9
CANSAT56G2129 Cannabis sativa HOM05D000432 ORTHO05D000320 1.5e-07 61.2 325 23.1
SEGI_33442 Sequoiadendron giganteum HOM05D000432 ORTHO05D000320 1.5e-07 61.2 42 66.7
Duzib235G0417 Durio zibethinus HOM05D000432 ORTHO05D000320 3.3e-07 60.1 302 22.2
HanXRQChr14g0430301 Helianthus annuus HOM05D000432 ORTHO05D000320 3.3e-07 60.1 302 23.5
Eucgr.J02419 Eucalyptus grandis HOM05D000432 ORTHO05D000320 4.3e-07 59.7 297 25.6
Aqoxy7G03768 Aquilegia oxysepala HOM05D000432 ORTHO05D000320 5.6e-07 59.3 269 27.9
HanXRQChr14g0430321 Helianthus annuus HOM05D000432 ORTHO05D000320 1.2e-06 58.2 301 23.3
Sed0015848 Sechium edule HOM05D000432 ORTHO05D000320 1.6e-06 57.8 295 24.1
EL10Ac3g05561 Beta vulgaris HOM05D000432 ORTHO05D000320 2.1e-06 57.4 293 23.2
AUR62037280 Chenopodium quinoa HOM05D000432 ORTHO05D000320 2.1e-06 57.4 290 22.1
Haze_06183 Corylus avellana HOM05D000432 ORTHO05D000320 2.1e-06 57.4 261 23.4
Eucgr.J02410 Eucalyptus grandis HOM05D000432 ORTHO05D000320 2.1e-06 57.4 286 23.8
Gohir.A04G031600 Gossypium hirsutum HOM05D000432 ORTHO05D000320 2.1e-06 57.4 273 23.1
Cc00_g32420 Coffea canephora HOM05D000432 ORTHO05D000320 2.8e-06 57.0 305 23.6
ECA238G0814 Erigeron canadensis HOM05D000432 ORTHO05D000320 2.8e-06 57.0 301 22.9
Eucgr.J02413 Eucalyptus grandis HOM05D000432 ORTHO05D000320 2.8e-06 57.0 300 25.0
SalBow6G0131 Salvia bowleyana HOM05D000432 ORTHO05D000320 2.8e-06 57.0 78 38.5
FAN08G2549 Fragaria x ananassa HOM05D000432 ORTHO05D000320 3.6e-06 56.6 275 21.5
FAN08G2710 Fragaria x ananassa HOM05D000432 ORTHO05D000320 3.6e-06 56.6 275 21.5
PGR102G2712 Punica granatum HOM05D000432 ORTHO05D000320 3.6e-06 56.6 173 24.9
Gohir.A09G012100 Gossypium hirsutum HOM05D000432 ORTHO05D000320 4.7e-06 56.2 247 26.7
Zm00001eb299570 Zea mays HOM05D005161 ORTHO05D006816 4.7e-06 56.2 105 35.2
Lj5C822T4 Lonicera japonica HOM05D000432 ORTHO05D000320 6.2e-06 55.8 79 35.4
Cc00_g11810 Coffea canephora HOM05D000432 ORTHO05D000320 8.1e-06 55.5 276 24.3
Lj9C723T3 Lonicera japonica HOM05D000432 ORTHO05D000320 8.1e-06 55.5 91 31.9
Prupe.3G040900 Prunus persica HOM05D000432 ORTHO05D000320 8.1e-06 55.5 296 23.0


User provided reference genes

Program Settings