Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08959 Sequoiadendron giganteum HOM05D001826 ORTHO05D007448 1.2e-189 666.4 353 100.0
SEGI_28699 Sequoiadendron giganteum HOM05D001826 ORTHO05D007448 1.2e-189 666.4 353 100.0
CANSAT54G1166 Cannabis sativa HOM05D001826 ORTHO05D007448 5.8e-30 136.0 90 76.7
Aqoxy7G00079 Aquilegia oxysepala HOM05D001826 ORTHO05D007448 3.2e-28 130.2 157 52.9
Eucgr.G01108 Eucalyptus grandis HOM05D001826 ORTHO05D007448 3.2e-28 130.2 185 47.6
Pp3c8_16170 Physcomitrium patens HOM05D001826 ORTHO05D007448 3.2e-28 130.2 375 33.3
QL11p027607 Quercus lobata HOM05D001826 ORTHO05D007448 3.2e-28 130.2 91 73.6
Dinv08956 Davidia involucrata HOM05D001826 ORTHO05D007448 4.1e-28 129.8 89 74.2
ATR0767G253 Amborella trichopoda HOM05D001826 ORTHO05D007448 5.4e-28 129.4 270 39.6
TAR625G0568 Trochodendron aralioides HOM05D001826 ORTHO05D007448 5.4e-28 129.4 89 74.2
SEGI_19518 Sequoiadendron giganteum HOM05D016871 ORTHO05D007448 9.2e-28 128.6 92 68.5
CiPaw.05G025600 Carya illinoinensis HOM05D001826 ORTHO05D007448 3.5e-27 126.7 89 73.0
Manes.10G091900 Manihot esculenta HOM05D001826 ORTHO05D007448 3.5e-27 126.7 101 66.3
MBI16_g26724_MAGBIO Magnolia biondii HOM05D001826 ORTHO05D007448 6.0e-27 125.9 268 36.6
Peaxi162Scf00152g00736 Petunia axillaris HOM05D001826 ORTHO05D007448 6.0e-27 125.9 145 51.7
Oeu014210.1 Olea europaea HOM05D001826 ORTHO05D007448 7.8e-27 125.6 142 51.4
Potri.009G080800 Populus trichocarpa HOM05D001826 ORTHO05D007448 1.0e-26 125.2 245 38.4
TAR381G0061 Trochodendron aralioides HOM05D001826 ORTHO05D007448 2.3e-26 124.0 138 52.2
TAR381G1682 Trochodendron aralioides HOM05D001826 ORTHO05D007448 2.3e-26 124.0 138 52.2
SalBow6G1497 Salvia bowleyana HOM05D001826 ORTHO05D007448 3.0e-26 123.6 169 46.7
Ciclev10027852m.g Citrus clementina HOM05D001826 ORTHO05D007448 5.0e-26 122.9 160 51.9
Glyma.07G184800 Glycine max HOM05D001826 ORTHO05D007448 5.0e-26 122.9 89 71.9
PSO210G3732 Papaver somniferum HOM05D001826 ORTHO05D007448 5.0e-26 122.9 89 69.7
Lalb_Chr09g0327001 Lupinus albus HOM05D001826 ORTHO05D007448 6.6e-26 122.5 177 44.6
Ca_18434_v3 Cicer arietinum L. HOM05D001826 ORTHO05D007448 8.6e-26 122.1 219 40.2
PSO761G0577 Papaver somniferum HOM05D001826 ORTHO05D007448 8.6e-26 122.1 89 69.7
arahy.Tifrunner.gnm1.ann1.HUBH2G Arachis hypogaea HOM05D001826 ORTHO05D007448 1.1e-25 121.7 92 71.7
Pp3c24_12350 Physcomitrium patens HOM05D001826 ORTHO05D007448 1.1e-25 121.7 373 31.9
unitig_46.g18835 Utricularia gibba HOM05D001826 ORTHO05D007448 1.1e-25 121.7 89 69.7
Aa31LG9G9650 Aethionema arabicum HOM05D001826 ORTHO05D007448 1.5e-25 121.3 91 71.4
Cpa.g.sc20.55 Carica papaya HOM05D001826 ORTHO05D007448 1.5e-25 121.3 121 55.4
CDE02G4107 Ceratophyllum demersum HOM05D001826 ORTHO05D007448 1.5e-25 121.3 140 51.4
Glyma.08G064600 Glycine max HOM05D001826 ORTHO05D007448 1.5e-25 121.3 90 71.1
Zm00001eb134700 Zea mays HOM05D001826 ORTHO05D007448 1.5e-25 121.3 140 51.4
Thecc.02G037000 Theobroma cacao HOM05D001826 ORTHO05D007448 1.9e-25 120.9 126 55.6
CSS0001920 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D007448 2.5e-25 120.6 89 70.8
MSTRG.20246 Avicennia marina HOM05D001826 ORTHO05D007448 3.3e-25 120.2 167 47.9
Haze_10373 Corylus avellana HOM05D001826 ORTHO05D007448 4.3e-25 119.8 137 52.6
Gohir.D02G234000 Gossypium hirsutum HOM05D001826 ORTHO05D007448 4.3e-25 119.8 134 55.2
Gorai.005G262000 Gossypium raimondii HOM05D001826 ORTHO05D007448 4.3e-25 119.8 134 55.2
CDE04G3474 Ceratophyllum demersum HOM05D001826 ORTHO05D007448 5.6e-25 119.4 158 46.8
arahy.Tifrunner.gnm1.ann1.2GZ3LH Arachis hypogaea HOM05D001826 ORTHO05D007448 7.3e-25 119.0 95 68.4
MELO3C018570.2 Cucumis melo HOM05D001826 ORTHO05D007448 7.3e-25 119.0 127 52.8
Migut.B00510 Erythranthe guttata HOM05D001826 ORTHO05D007448 7.3e-25 119.0 89 68.5
FAN20G0276 Fragaria x ananassa HOM05D001826 ORTHO05D007448 7.3e-25 119.0 89 68.5
Phvul.002G216200 Phaseolus vulgaris HOM05D001826 ORTHO05D007448 7.3e-25 119.0 90 67.8
CsaV3_7G007280 Cucumis sativus L. HOM05D001826 ORTHO05D007448 1.2e-24 118.2 127 52.0
Oeu025232.1 Olea europaea HOM05D001826 ORTHO05D007448 1.2e-24 118.2 85 71.8
Sed0020177 Sechium edule HOM05D001826 ORTHO05D007448 1.2e-24 118.2 125 52.8
SGA_v2.0_scaffold32G12958 Striga asiatica HOM05D001826 ORTHO05D007448 1.2e-24 118.2 140 50.7
TPR.G16905 Trifolium pratense HOM05D001826 ORTHO05D007448 1.2e-24 118.2 89 69.7
vmacro01904 Vaccinium macrocarpon HOM05D001826 ORTHO05D007448 1.2e-24 118.2 138 52.2
CARHR252720 Cardamine hirsuta HOM05D001826 ORTHO05D007448 1.6e-24 117.9 92 69.6
Cfa004776 Carpinus fangiana HOM05D001826 ORTHO05D007448 1.6e-24 117.9 180 45.0
Gohir.A03G212500 Gossypium hirsutum HOM05D001826 ORTHO05D007448 1.6e-24 117.9 132 54.5
Nn1g05773 Nelumbo nucifera HOM05D001826 ORTHO05D007448 1.6e-24 117.9 90 71.1
Sopen11g019710 Solanum pennellii HOM05D001826 ORTHO05D007448 1.6e-24 117.9 89 68.5
HPP92_019547 Vanilla planifolia HOM05D001826 ORTHO05D007448 1.6e-24 117.9 87 69.0
Lj4g0008995 Lotus japonicus HOM05D001826 ORTHO05D007448 2.1e-24 117.5 175 42.9
Medtr4g092790 Medicago truncatula HOM05D001826 ORTHO05D007448 2.8e-24 117.1 166 45.8
Prupe.8G077000 Prunus persica HOM05D001826 ORTHO05D007448 2.8e-24 117.1 132 54.5
AagrBONN_evm.TU.Sc2ySwM_369.491 Anthoceros agrestis HOM05D001826 ORTHO05D007448 3.6e-24 116.7 267 37.5
ECA236G4009 Erigeron canadensis HOM05D001826 ORTHO05D007448 3.6e-24 116.7 89 71.9
FvH4_2g11000 Fragaria vesca HOM05D001826 ORTHO05D007448 3.6e-24 116.7 89 66.3
FAN24G1862 Fragaria x ananassa HOM05D001826 ORTHO05D007448 3.6e-24 116.7 89 66.3
Os12g0617800 Oryza sativa ssp. japonica HOM05D001826 ORTHO05D007448 3.6e-24 116.7 89 64.0
Actinidia00328 Actinidia chinensis HOM05D001826 ORTHO05D007448 4.7e-24 116.3 107 63.6
CSS0011209 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D007448 4.7e-24 116.3 189 43.4
CSS0048830 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D007448 4.7e-24 116.3 189 43.4
ClCG09G016370 Citrullus lanatus HOM05D001826 ORTHO05D007448 4.7e-24 116.3 156 48.1
TWI59G0620 Tripterygium wilfordii HOM05D001826 ORTHO05D007448 4.7e-24 116.3 220 37.3
CSS0031120 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D007448 6.2e-24 115.9 85 71.8
Duzib248G0138 Durio zibethinus HOM05D001826 ORTHO05D007448 6.2e-24 115.9 88 70.5
Carub.0006s3276 Capsella rubella HOM05D001826 ORTHO05D007448 8.1e-24 115.5 88 71.6
Cc02_g20480 Coffea canephora HOM05D001826 ORTHO05D007448 8.1e-24 115.5 85 69.4
Lsat_1_v5_gn_7_83220 Lactuca sativa HOM05D001826 ORTHO05D007448 8.1e-24 115.5 89 70.8
Lj5A224T62 Lonicera japonica HOM05D001826 ORTHO05D007448 8.1e-24 115.5 86 73.3
AL6G48340 Arabidopsis lyrata HOM05D001826 ORTHO05D007448 1.1e-23 115.2 88 70.5
AT4G04850 Arabidopsis thaliana HOM05D001826 ORTHO05D007448 1.1e-23 115.2 88 70.5
AUR62027069 Chenopodium quinoa HOM05D001826 ORTHO05D007448 1.8e-23 114.4 133 48.9
COL.COLO4_17848 Corchorus olitorius HOM05D001826 ORTHO05D007448 1.8e-23 114.4 133 49.6
Nitab4.5_0001093g0060 Nicotiana tabacum HOM05D001826 ORTHO05D007448 1.8e-23 114.4 168 45.2
Hund06483 Selenicereus undatus HOM05D001826 ORTHO05D007448 2.3e-23 114.0 271 34.7
CAN.G336.1 Capsicum annuum HOM05D001826 ORTHO05D007448 3.1e-23 113.6 153 47.1
Sp6g04130 Schrenkiella parvula HOM05D001826 ORTHO05D007448 4.0e-23 113.2 91 65.9
DCAR_021888 Daucus carota HOM05D001826 ORTHO05D007448 8.9e-23 112.1 108 61.1
PGR042G3754 Punica granatum HOM05D001826 ORTHO05D007448 8.9e-23 112.1 85 69.4
Sc13g0008110 Simmondsia chinensis HOM05D001826 ORTHO05D007448 8.9e-23 112.1 88 69.3
Psat7g103920 Pisum sativum HOM05D001826 ORTHO05D007448 1.2e-22 111.7 146 47.3
AUR62030910 Chenopodium quinoa HOM05D001826 ORTHO05D007448 1.5e-22 111.3 152 44.7
HanXRQChr08g0227131 Helianthus annuus HOM05D001826 ORTHO05D007448 1.5e-22 111.3 123 56.1
Thhalv10028445m.g Eutrema salsugineum HOM05D001826 ORTHO05D007448 3.4e-22 110.2 92 64.1
THA.LOC104813027 Tarenaya hassleriana HOM05D001826 ORTHO05D007448 3.4e-22 110.2 98 63.3
BolC9t56144H Brassica oleracea HOM05D001826 ORTHO05D007448 4.4e-22 109.8 135 48.9
A09p26080 Brassica napus HOM05D001826 ORTHO05D007448 7.5e-22 109.0 137 48.2
MD10G1058200 Malus domestica HOM05D001826 ORTHO05D007448 7.5e-22 109.0 89 66.3
SMO147G0144 Selaginella moellendorffii HOM05D001826 ORTHO05D007448 7.5e-22 109.0 86 67.4
RcHm_v2.0_Chr6g0269211 Rosa chinensis HOM05D001826 ORTHO05D007448 9.9e-22 108.6 145 46.9
arahy.Tifrunner.gnm1.ann1.P6A6TR Arachis hypogaea HOM05D001826 ORTHO05D007448 1.3e-21 108.2 123 54.5
Mapoly0035s0114 Marchantia polymorpha HOM05D001826 ORTHO05D007448 1.3e-21 108.2 290 35.9
BcaC04g21330 Brassica carinata HOM05D001826 ORTHO05D007448 1.7e-21 107.8 138 47.8
C09p33100 Brassica napus HOM05D001826 ORTHO05D007448 1.7e-21 107.8 138 47.8
arahy.Tifrunner.gnm1.ann1.Z2GU4A Arachis hypogaea HOM05D001826 ORTHO05D007448 2.9e-21 107.1 123 53.7
BraA09t38175Z Brassica rapa HOM05D001826 ORTHO05D007448 3.7e-21 106.7 143 44.8
Psat0s3793g0040 Pisum sativum HOM05D001826 ORTHO05D007448 4.9e-21 106.3 84 69.0
BcaB01g01839 Brassica carinata HOM05D001826 ORTHO05D007448 8.3e-21 105.5 140 46.4
MD05G1050600 Malus domestica HOM05D001826 ORTHO05D007448 1.1e-20 105.1 89 65.2
SMO235G0021 Selaginella moellendorffii HOM05D001826 ORTHO05D007448 1.0e-18 98.6 74 68.9
EL10Ac9g22137 Beta vulgaris HOM05D001826 ORTHO05D007448 3.0e-18 97.1 156 44.2
Ah.01g024250 Amaranthus hybridus HOM05D001826 ORTHO05D007448 5.2e-15 86.3 116 46.6
CBR_g8371 Chara braunii HOM05D001826 ORTHO05D007448 6.8e-15 85.9 89 57.3
arahy.Tifrunner.gnm1.ann1.6Y0SU8 Arachis hypogaea HOM05D001826 ORTHO05D007448 2.2e-13 80.9 52 73.1
SEGI_00835 Sequoiadendron giganteum HOM05D002969 ORTHO05D011582 1.4e-12 78.2 158 32.9
SEGI_32279 Sequoiadendron giganteum HOM05D002969 ORTHO05D011582 1.2e-11 75.1 108 39.8
SEGI_20098 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.6e-11 74.7 115 40.0
SEGI_18698 Sequoiadendron giganteum HOM05D016871 ORTHO05D011582 1.3e-10 71.6 121 37.2
SEGI_27268 Sequoiadendron giganteum HOM05D016871 ORTHO05D011582 9.6e-09 65.5 139 31.7
SEGI_30578 Sequoiadendron giganteum HOM05D000979 ORTHO05D003182 1.1e-07 62.0 78 39.7
SEGI_06906 Sequoiadendron giganteum HOM05D016871 ORTHO05D007448 1.4e-07 61.6 50 52.0
SEGI_15206 Sequoiadendron giganteum HOM05D016871 ORTHO05D007448 1.4e-07 61.6 54 48.1


User provided reference genes

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