Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28698 Sequoiadendron giganteum HOM05D001452 ORTHO05D385646 1.8e-50 202.2 98 100.0
SEGI_20247 Sequoiadendron giganteum HOM05D001452 ORTHO05D001388 6.3e-11 70.9 45 68.9
Potri.009G080300 Populus trichocarpa HOM05D001452 ORTHO05D001388 1.6e-09 66.2 41 73.2
EL10Ac9g22132 Beta vulgaris HOM05D001452 ORTHO05D001388 2.7e-09 65.5 87 37.9
THA.LOC104799690 Tarenaya hassleriana HOM05D001452 ORTHO05D001388 2.7e-09 65.5 87 43.7
Lsat_1_v5_gn_7_83081 Lactuca sativa HOM05D001452 ORTHO05D001388 1.7e-08 62.8 50 54.0
MELO3C003496.2 Cucumis melo HOM05D001452 ORTHO05D001388 2.9e-08 62.0 39 74.4
CsaV3_3G048230 Cucumis sativus L. HOM05D001452 ORTHO05D001388 2.9e-08 62.0 39 74.4
Actinidia28015 Actinidia chinensis HOM05D001452 ORTHO05D001388 3.8e-08 61.6 40 65.0
Cfa004770 Carpinus fangiana HOM05D001452 ORTHO05D001388 5.0e-08 61.2 70 48.6
MD10G1057600 Malus domestica HOM05D001452 ORTHO05D001388 5.0e-08 61.2 72 43.1
Sed0010773 Sechium edule HOM05D001452 ORTHO05D001388 8.5e-08 60.5 49 61.2
TAR628G1206 Trochodendron aralioides HOM05D001452 ORTHO05D001388 8.5e-08 60.5 39 66.7
Glyma.02G217600 Glycine max HOM05D001452 ORTHO05D001388 1.1e-07 60.1 75 44.0
CSS0047617 Camellia sinensis var. sinensis HOM05D001452 ORTHO05D001388 1.5e-07 59.7 46 58.7
MD08G1208000 Malus domestica HOM05D001452 ORTHO05D001388 1.5e-07 59.7 72 45.8
CiPaw.07G161500 Carya illinoinensis HOM05D001452 ORTHO05D001388 1.9e-07 59.3 70 45.7
CDE04G0720 Ceratophyllum demersum HOM05D001452 ORTHO05D001388 1.9e-07 59.3 77 40.3
SEGI_14113 Sequoiadendron giganteum HOM05D001452 ORTHO05D001388 1.9e-07 59.3 39 69.2
Carub.0004s0577 Capsella rubella HOM05D001452 ORTHO05D001388 2.5e-07 58.9 70 42.9
Haze_10366 Corylus avellana HOM05D001452 ORTHO05D001388 2.5e-07 58.9 70 47.1
Potri.001G286000 Populus trichocarpa HOM05D001452 ORTHO05D001388 2.5e-07 58.9 40 67.5
vmacro19592 Vaccinium macrocarpon HOM05D001452 ORTHO05D001388 2.5e-07 58.9 40 60.0
CSS0040467 Camellia sinensis var. sinensis HOM05D001452 ORTHO05D001388 3.2e-07 58.5 40 62.5
CARHR278420 Cardamine hirsuta HOM05D001452 ORTHO05D001388 3.2e-07 58.5 70 45.7
ClCG10G009760 Citrullus lanatus HOM05D001452 ORTHO05D001388 3.2e-07 58.5 39 66.7
Cc10_g08210 Coffea canephora HOM05D001452 ORTHO05D001388 3.2e-07 58.5 40 65.0
HanXRQChr10g0319921 Helianthus annuus HOM05D001452 ORTHO05D001388 3.2e-07 58.5 44 56.8
Peaxi162Scf00152g00723 Petunia axillaris HOM05D001452 ORTHO05D001388 3.2e-07 58.5 40 65.0
VMungo0647G0914 Vigna mungo HOM05D001452 ORTHO05D001388 3.2e-07 58.5 45 60.0
arahy.Tifrunner.gnm1.ann1.5N4DPF Arachis hypogaea HOM05D001452 ORTHO05D001388 4.2e-07 58.2 45 57.8
BcaC01g02683 Brassica carinata HOM05D001452 ORTHO05D001388 4.2e-07 58.2 70 45.7
A06p31200 Brassica napus HOM05D001452 ORTHO05D001388 4.2e-07 58.2 78 42.3
C03p61780 Brassica napus HOM05D001452 ORTHO05D001388 4.2e-07 58.2 70 45.7
BolC3t18439H Brassica oleracea HOM05D001452 ORTHO05D001388 4.2e-07 58.2 70 45.7
BraA06t26059Z Brassica rapa HOM05D001452 ORTHO05D001388 4.2e-07 58.2 78 42.3
CSS0008851 Camellia sinensis var. sinensis HOM05D001452 ORTHO05D001388 4.2e-07 58.2 46 58.7
ECA236G3262 Erigeron canadensis HOM05D001452 ORTHO05D001388 4.2e-07 58.2 54 44.4
Migut.C00297 Erythranthe guttata HOM05D001452 ORTHO05D001388 4.2e-07 58.2 52 55.8
Rhsim05G0095400 Rhododendron simsii HOM05D001452 ORTHO05D001388 4.2e-07 58.2 46 58.7
TAR625G0632 Trochodendron aralioides HOM05D001452 ORTHO05D001388 4.2e-07 58.2 77 41.6
arahy.Tifrunner.gnm1.ann1.XM74V8 Arachis hypogaea HOM05D001452 ORTHO05D001388 5.5e-07 57.8 39 64.1
CiPaw.07G161400 Carya illinoinensis HOM05D001452 ORTHO05D001388 5.5e-07 57.8 72 44.4
MBI16_g31389_MAGBIO Magnolia biondii HOM05D001452 ORTHO05D001388 5.5e-07 57.8 72 45.8
PSO675G7512 Papaver somniferum HOM05D001452 ORTHO05D001388 5.5e-07 57.8 74 40.5
PSO675G7890 Papaver somniferum HOM05D001452 ORTHO05D001388 5.5e-07 57.8 74 40.5
Phvul.009G145700 Phaseolus vulgaris HOM05D001452 ORTHO05D001388 5.5e-07 57.8 86 44.2
AL8G41830 Arabidopsis lyrata HOM05D001452 ORTHO05D001388 7.2e-07 57.4 70 44.3
arahy.Tifrunner.gnm1.ann1.96L8KV Arachis hypogaea HOM05D001452 ORTHO05D001388 7.2e-07 57.4 82 43.9
arahy.Tifrunner.gnm1.ann1.JBT1X5 Arachis hypogaea HOM05D001452 ORTHO05D001388 7.2e-07 57.4 82 43.9
HanXRQChr15g0484991 Helianthus annuus HOM05D001452 ORTHO05D001388 7.2e-07 57.4 39 66.7
Prupe.1G540200 Prunus persica HOM05D001452 ORTHO05D001388 7.2e-07 57.4 39 61.5
Carub.0008s2525 Capsella rubella HOM05D001452 ORTHO05D001388 9.4e-07 57.0 70 44.3
Lj4g0015408 Lotus japonicus HOM05D001452 ORTHO05D001388 9.4e-07 57.0 39 61.5
Lalb_Chr16g0383121 Lupinus albus HOM05D001452 ORTHO05D001388 9.4e-07 57.0 39 66.7
Medtr3g111310 Medicago truncatula HOM05D001452 ORTHO05D001388 9.4e-07 57.0 70 47.1
PSO356G0047 Papaver somniferum HOM05D001452 ORTHO05D001388 9.4e-07 57.0 74 40.5
Phvul.008G184700 Phaseolus vulgaris HOM05D001452 ORTHO05D001388 9.4e-07 57.0 39 64.1
Psat5g018600 Pisum sativum HOM05D001452 ORTHO05D001388 9.4e-07 57.0 87 42.5
QL12p040020 Quercus lobata HOM05D001452 ORTHO05D001388 9.4e-07 57.0 70 45.7
Rhsim05G0095500 Rhododendron simsii HOM05D001452 ORTHO05D001388 9.4e-07 57.0 37 64.9
CANSAT21G2170 Cannabis sativa HOM05D001452 ORTHO05D001388 1.2e-06 56.6 72 44.4
Duzib093G1070 Durio zibethinus HOM05D001452 ORTHO05D001388 1.2e-06 56.6 39 61.5
Thhalv10004739m.g Eutrema salsugineum HOM05D001452 ORTHO05D001388 1.2e-06 56.6 78 42.3
Hma1.2p1_0010F.1_g006350 Hydrangea macrophylla HOM05D001452 ORTHO05D001388 1.2e-06 56.6 51 54.9
LjContig00408g0025974 Lotus japonicus HOM05D001452 ORTHO05D001388 1.2e-06 56.6 39 61.5
Lalb_Chr08g0242651 Lupinus albus HOM05D001452 ORTHO05D001388 1.2e-06 56.6 77 42.9
Lalb_Chr23g0269901 Lupinus albus HOM05D001452 ORTHO05D001388 1.2e-06 56.6 86 41.9
PSO356G0002 Papaver somniferum HOM05D001452 ORTHO05D001388 1.2e-06 56.6 74 39.2
CDE07G0726 Ceratophyllum demersum HOM05D001452 ORTHO05D001388 1.6e-06 56.2 40 60.0
MELO3C018042.2 Cucumis melo HOM05D001452 ORTHO05D001388 1.6e-06 56.2 39 64.1
CsaV3_4G014640 Cucumis sativus L. HOM05D001452 ORTHO05D001388 1.6e-06 56.2 39 64.1
Migut.B00516 Erythranthe guttata HOM05D001452 ORTHO05D001388 1.6e-06 56.2 39 64.1
Eucgr.G01085 Eucalyptus grandis HOM05D001452 ORTHO05D001388 1.6e-06 56.2 58 50.0
Rhsim06G0069100 Rhododendron simsii HOM05D001452 ORTHO05D001388 1.6e-06 56.2 75 42.7
Sp2g27540 Schrenkiella parvula HOM05D001452 ORTHO05D001388 1.6e-06 56.2 47 57.4
GSVIVG01038531001 Vitis vinifera HOM05D001452 ORTHO05D001388 1.6e-06 56.2 48 54.2
ATR0144G017 Amborella trichopoda HOM05D001452 ORTHO05D001388 2.1e-06 55.8 75 42.7
CiPaw.05G026200 Carya illinoinensis HOM05D001452 ORTHO05D001388 2.1e-06 55.8 77 41.6
Ca_15542_v3 Cicer arietinum L. HOM05D001452 ORTHO05D001388 2.1e-06 55.8 87 42.5
Ciclev10001706m.g Citrus clementina HOM05D001452 ORTHO05D001388 2.1e-06 55.8 77 40.3
ECA232G4258 Erigeron canadensis HOM05D001452 ORTHO05D001388 2.1e-06 55.8 39 66.7
Glyma.04G090300 Glycine max HOM05D001452 ORTHO05D001388 2.1e-06 55.8 77 41.6
Medtr5g067240 Medicago truncatula HOM05D001452 ORTHO05D001388 2.1e-06 55.8 39 61.5
PSO349G0174 Papaver somniferum HOM05D001452 ORTHO05D001388 2.1e-06 55.8 42 61.9
CSS0011386 Camellia sinensis var. sinensis HOM05D001452 ORTHO05D001388 2.7e-06 55.5 39 64.1
CSS0034545 Camellia sinensis var. sinensis HOM05D001452 ORTHO05D001388 2.7e-06 55.5 40 60.0
CAN.G723.25 Capsicum annuum HOM05D001452 ORTHO05D001388 2.7e-06 55.5 51 51.0
Psat7g104080 Pisum sativum HOM05D001452 ORTHO05D001388 2.7e-06 55.5 78 41.0
COL.COLO4_32432 Corchorus olitorius HOM05D001452 ORTHO05D001388 3.6e-06 55.1 39 61.5
TWI12G0971 Tripterygium wilfordii HOM05D001452 ORTHO05D001388 3.6e-06 55.1 75 37.3
vmacro21367 Vaccinium macrocarpon HOM05D001452 ORTHO05D001388 3.6e-06 55.1 39 61.5
Atru.chr6.1363 Acer truncatum HOM05D001452 ORTHO05D001388 4.7e-06 54.7 39 59.0
Actinidia10263 Actinidia chinensis HOM05D001452 ORTHO05D001388 4.7e-06 54.7 39 61.5
Actinidia19258 Actinidia chinensis HOM05D001452 ORTHO05D001388 4.7e-06 54.7 39 61.5
Ah.01g024210 Amaranthus hybridus HOM05D001452 ORTHO05D001388 4.7e-06 54.7 88 35.2
Gohir.D01G113200 Gossypium hirsutum HOM05D001452 ORTHO05D001388 4.7e-06 54.7 79 38.0
Gorai.002G138000 Gossypium raimondii HOM05D001452 ORTHO05D001388 4.7e-06 54.7 79 38.0
Sopen04g030540 Solanum pennellii HOM05D001452 ORTHO05D001388 4.7e-06 54.7 40 60.0
GSVIVG01009232001 Vitis vinifera HOM05D001452 ORTHO05D001388 4.7e-06 54.7 70 44.3
Aqoxy6G00627 Aquilegia oxysepala HOM05D001452 ORTHO05D001388 6.1e-06 54.3 39 59.0
AT5G64460 Arabidopsis thaliana HOM05D001452 ORTHO05D001388 6.1e-06 54.3 39 61.5
MSTRG.25003 Avicennia marina HOM05D001452 ORTHO05D001388 6.1e-06 54.3 71 46.5
AUR62027075 Chenopodium quinoa HOM05D001452 ORTHO05D001388 6.1e-06 54.3 42 59.5
Gohir.A01G125700 Gossypium hirsutum HOM05D001452 ORTHO05D001388 6.1e-06 54.3 70 41.4
Gohir.A13G049100 Gossypium hirsutum HOM05D001452 ORTHO05D001388 6.1e-06 54.3 39 64.1
Hma1.2p1_0435F.1_g152560 Hydrangea macrophylla HOM05D001452 ORTHO05D001388 6.1e-06 54.3 72 43.1
PSO700G0167 Papaver somniferum HOM05D001452 ORTHO05D001388 6.1e-06 54.3 82 37.8
PSO761G0610 Papaver somniferum HOM05D001452 ORTHO05D001388 6.1e-06 54.3 82 37.8
RcHm_v2.0_Chr7g0233171 Rosa chinensis HOM05D001452 ORTHO05D001388 6.1e-06 54.3 71 45.1
Sabra16G0178500 Salix brachista HOM05D001452 ORTHO05D001388 6.1e-06 54.3 53 50.9
Sc14g0003590 Simmondsia chinensis HOM05D001452 ORTHO05D001388 6.1e-06 54.3 86 40.7
SGA_v2.0_scaffold342G49397 Striga asiatica HOM05D001452 ORTHO05D001388 6.1e-06 54.3 39 64.1
TPR.G27040 Trifolium pratense HOM05D001452 ORTHO05D001388 6.1e-06 54.3 39 56.4
TWI14G0778 Tripterygium wilfordii HOM05D001452 ORTHO05D001388 6.1e-06 54.3 40 60.0
TWI56G0060 Tripterygium wilfordii HOM05D001452 ORTHO05D001388 6.1e-06 54.3 75 37.3
Aa31LG1G17450 Aethionema arabicum HOM05D001452 ORTHO05D001388 8.0e-06 53.9 41 58.5
Ca_11961_v3 Cicer arietinum L. HOM05D001452 ORTHO05D001388 8.0e-06 53.9 39 59.0
Cc02_g20540 Coffea canephora HOM05D001452 ORTHO05D001388 8.0e-06 53.9 75 40.0
Lj4A83T68 Lonicera japonica HOM05D001452 ORTHO05D001388 8.0e-06 53.9 51 52.9
Medtr4g092840 Medicago truncatula HOM05D001452 ORTHO05D001388 8.0e-06 53.9 45 55.6
Potri.002G108500 Populus trichocarpa HOM05D001452 ORTHO05D001388 8.0e-06 53.9 70 42.9
Hund05223 Selenicereus undatus HOM05D001452 ORTHO05D001388 8.0e-06 53.9 39 64.1
Sc02g0008410 Simmondsia chinensis HOM05D001452 ORTHO05D001388 8.0e-06 53.9 70 41.4
SGA_v2.0_scaffold32G12953 Striga asiatica HOM05D001452 ORTHO05D001388 8.0e-06 53.9 39 61.5


User provided reference genes

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