Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28653 Sequoiadendron giganteum HOM05D000434 ORTHO05D007220 3.3e-113 411.8 213 100.0
SEGI_39802 Sequoiadendron giganteum HOM05D000434 ORTHO05D007220 2.7e-107 392.1 202 100.0
CDE09G1335 Ceratophyllum demersum HOM05D000434 ORTHO05D007220 3.9e-66 255.4 208 63.5
MELO3C002307.2 Cucumis melo HOM05D000434 ORTHO05D007220 3.3e-65 252.3 208 62.0
CsaV3_1G008930 Cucumis sativus L. HOM05D000434 ORTHO05D007220 3.3e-65 252.3 207 61.8
TAR371G0697 Trochodendron aralioides HOM05D000434 ORTHO05D007220 4.3e-65 251.9 208 62.5
Hund05601 Selenicereus undatus HOM05D000434 ORTHO05D007220 5.7e-65 251.5 205 62.9
ClCG03G003080 Citrullus lanatus HOM05D000434 ORTHO05D007220 3.7e-64 248.8 208 62.0
Sed0007484 Sechium edule HOM05D000434 ORTHO05D007220 3.7e-64 248.8 207 63.3
ATR0122G015 Amborella trichopoda HOM05D000434 ORTHO05D007220 6.3e-64 248.1 207 62.8
CANSAT80G0711 Cannabis sativa HOM05D000434 ORTHO05D007220 1.1e-63 247.3 204 64.2
CAN.G126.48 Capsicum annuum HOM05D000434 ORTHO05D007220 1.1e-63 247.3 206 62.6
Sc04g0001370 Simmondsia chinensis HOM05D000434 ORTHO05D007220 1.4e-63 246.9 203 63.1
Sabra15G0108200 Salix brachista HOM05D000434 ORTHO05D007220 1.8e-63 246.5 206 63.6
Nn3g16677 Nelumbo nucifera HOM05D000434 ORTHO05D007220 2.4e-63 246.1 217 60.4
PSO063G6548 Papaver somniferum HOM05D000434 ORTHO05D007220 2.4e-63 246.1 206 62.6
Thecc.03G116400 Theobroma cacao HOM05D000434 ORTHO05D007220 2.4e-63 246.1 204 65.2
arahy.Tifrunner.gnm1.ann1.NJ3BP6 Arachis hypogaea HOM05D000434 ORTHO05D007220 4.1e-63 245.4 205 64.4
Cpa.g.sc159.10 Carica papaya HOM05D000434 ORTHO05D007220 5.3e-63 245.0 203 66.0
Cc04_g11340 Coffea canephora HOM05D000434 ORTHO05D007220 5.3e-63 245.0 205 62.4
Solyc03g112060.3 Solanum lycopersicum HOM05D000434 ORTHO05D007220 5.3e-63 245.0 206 61.7
EL10Ac7g17990 Beta vulgaris HOM05D000434 ORTHO05D007220 9.1e-63 244.2 210 62.4
FAN04G2744 Fragaria x ananassa HOM05D000434 ORTHO05D007220 9.1e-63 244.2 212 60.4
PSO754G0033 Papaver somniferum HOM05D000434 ORTHO05D007220 9.1e-63 244.2 206 61.7
Sopen03g031160 Solanum pennellii HOM05D000434 ORTHO05D007220 9.1e-63 244.2 208 61.5
arahy.Tifrunner.gnm1.ann1.T2T4K7 Arachis hypogaea HOM05D000434 ORTHO05D007220 1.2e-62 243.8 205 63.9
AT5G50210 Arabidopsis thaliana HOM05D000434 ORTHO05D007220 1.5e-62 243.4 199 64.3
Cfa019232 Carpinus fangiana HOM05D000434 ORTHO05D007220 2.0e-62 243.0 201 62.7
MD06G1164800 Malus domestica HOM05D000434 ORTHO05D007220 2.0e-62 243.0 201 62.7
MD14G1170100 Malus domestica HOM05D000434 ORTHO05D007220 2.0e-62 243.0 204 61.3
QL10p006642 Quercus lobata HOM05D000434 ORTHO05D007220 2.6e-62 242.7 202 62.9
PGSC0003DMG400018194 Solanum tuberosum HOM05D000434 ORTHO05D007220 2.6e-62 242.7 206 61.7
Carub.0008s1022 Capsella rubella HOM05D000434 ORTHO05D007220 3.4e-62 242.3 200 63.5
COL.COLO4_20642 Corchorus olitorius HOM05D000434 ORTHO05D007220 3.4e-62 242.3 203 64.5
RcHm_v2.0_Chr7g0192351 Rosa chinensis HOM05D000434 ORTHO05D007220 3.4e-62 242.3 205 62.9
Os12g0290150 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D007220 4.5e-62 241.9 205 62.0
Prupe.5G164300 Prunus persica HOM05D000434 ORTHO05D007220 4.5e-62 241.9 201 60.7
THA.LOC104824992 Tarenaya hassleriana HOM05D000434 ORTHO05D007220 4.5e-62 241.9 200 64.5
AUR62022128 Chenopodium quinoa HOM05D000434 ORTHO05D007220 5.9e-62 241.5 206 63.1
Haze_07599 Corylus avellana HOM05D000434 ORTHO05D007220 5.9e-62 241.5 201 62.7
BcaB08g35393 Brassica carinata HOM05D000434 ORTHO05D007220 7.7e-62 241.1 201 64.2
A10p08480 Brassica napus HOM05D000434 ORTHO05D007220 7.7e-62 241.1 201 65.2
BraSC37t46157Z Brassica rapa HOM05D000434 ORTHO05D007220 7.7e-62 241.1 201 65.2
Ciclev10019026m.g Citrus clementina HOM05D000434 ORTHO05D007220 7.7e-62 241.1 219 61.6
Lj5A131T30 Lonicera japonica HOM05D000434 ORTHO05D007220 7.7e-62 241.1 205 62.9
PGR044G1593 Punica granatum HOM05D000434 ORTHO05D007220 7.7e-62 241.1 205 62.4
Sp6g12320 Schrenkiella parvula HOM05D000434 ORTHO05D007220 7.7e-62 241.1 201 62.7
vmacro16649 Vaccinium macrocarpon HOM05D000434 ORTHO05D007220 7.7e-62 241.1 207 62.3
TWI23G1317 Tripterygium wilfordii HOM05D000434 ORTHO05D007220 1.0e-61 240.7 204 62.3
Duzib205G0335 Durio zibethinus HOM05D000434 ORTHO05D007220 1.3e-61 240.4 203 63.1
Gohir.D07G060300 Gossypium hirsutum HOM05D000434 ORTHO05D007220 1.3e-61 240.4 204 63.2
Gorai.001G064000 Gossypium raimondii HOM05D000434 ORTHO05D007220 1.3e-61 240.4 204 63.2
Manes.14G059700 Manihot esculenta HOM05D000434 ORTHO05D007220 1.3e-61 240.4 208 62.5
FvH4_5g06430 Fragaria vesca HOM05D000434 ORTHO05D007220 1.7e-61 240.0 201 62.2
Eucgr.K02783 Eucalyptus grandis HOM05D000434 ORTHO05D007220 2.2e-61 239.6 204 61.8
FAN13G1139 Fragaria x ananassa HOM05D000434 ORTHO05D007220 2.2e-61 239.6 212 59.4
FAN18G4510 Fragaria x ananassa HOM05D000434 ORTHO05D007220 2.2e-61 239.6 201 62.2
Aqoxy5G03714 Aquilegia oxysepala HOM05D000434 ORTHO05D007220 2.9e-61 239.2 204 62.7
BcaC04g20813 Brassica carinata HOM05D000434 ORTHO05D007220 2.9e-61 239.2 201 64.2
C09p38860 Brassica napus HOM05D000434 ORTHO05D007220 2.9e-61 239.2 201 64.2
BolC9t56752H Brassica oleracea HOM05D000434 ORTHO05D007220 2.9e-61 239.2 201 64.2
FAN08G1614 Fragaria x ananassa HOM05D000434 ORTHO05D007220 2.9e-61 239.2 201 62.2
Gohir.A07G056000 Gossypium hirsutum HOM05D000434 ORTHO05D007220 3.8e-61 238.8 204 63.2
Nitab4.5_0002522g0070 Nicotiana tabacum HOM05D000434 ORTHO05D007220 3.8e-61 238.8 206 59.7
TWI39G0950 Tripterygium wilfordii HOM05D000434 ORTHO05D007220 3.8e-61 238.8 204 61.8
AL8G24240 Arabidopsis lyrata HOM05D000434 ORTHO05D007220 5.0e-61 238.4 200 63.5
Thhalv10012812m.g Eutrema salsugineum HOM05D000434 ORTHO05D007220 5.0e-61 238.4 201 62.2
Potri.015G085300 Populus trichocarpa HOM05D000434 ORTHO05D007220 5.0e-61 238.4 203 62.6
Atru.chr9.2596 Acer truncatum HOM05D000434 ORTHO05D007220 8.5e-61 237.7 205 62.9
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 1.1e-60 237.3 206 61.7
AUR62001201 Chenopodium quinoa HOM05D000434 ORTHO05D007220 1.1e-60 237.3 205 62.4
Lj4g0018547 Lotus japonicus HOM05D000434 ORTHO05D007220 1.1e-60 237.3 203 63.1
VMungo1215G0744 Vigna mungo HOM05D000434 ORTHO05D007220 1.1e-60 237.3 205 63.4
Lalb_Chr07g0183031 Lupinus albus HOM05D000434 ORTHO05D007220 1.4e-60 236.9 206 62.1
Manes.06G111600 Manihot esculenta HOM05D000434 ORTHO05D007220 1.4e-60 236.9 208 62.5
HPP92_006247 Vanilla planifolia HOM05D000434 ORTHO05D007220 1.4e-60 236.9 205 59.5
CiPaw.11G018700 Carya illinoinensis HOM05D000434 ORTHO05D007220 1.9e-60 236.5 206 61.7
Glyma.05G042400 Glycine max HOM05D000434 ORTHO05D007220 1.9e-60 236.5 206 62.6
Migut.O00172 Erythranthe guttata HOM05D000434 ORTHO05D007220 3.2e-60 235.7 202 61.4
TAR629G3010 Trochodendron aralioides HOM05D000434 ORTHO05D007220 3.2e-60 235.7 191 64.9
unitig_8.g3068 Utricularia gibba HOM05D000434 ORTHO05D007220 4.2e-60 235.3 201 61.7
Ca_19423_v3 Cicer arietinum L. HOM05D000434 ORTHO05D007220 5.5e-60 235.0 204 61.8
Nitab4.5_0008037g0020 Nicotiana tabacum HOM05D000434 ORTHO05D007220 5.5e-60 235.0 204 59.3
CARHR258410 Cardamine hirsuta HOM05D000434 ORTHO05D007220 1.2e-59 233.8 200 64.0
Lsat_1_v5_gn_4_79240 Lactuca sativa HOM05D000434 ORTHO05D007220 1.2e-59 233.8 204 60.8
Phvul.003G202900 Phaseolus vulgaris HOM05D000434 ORTHO05D007220 1.2e-59 233.8 205 62.9
Medtr4g104680 Medicago truncatula HOM05D000434 ORTHO05D007220 1.6e-59 233.4 204 62.3
Dinv38518 Davidia involucrata HOM05D000434 ORTHO05D007220 2.7e-59 232.6 208 60.1
Pp3c19_15510 Physcomitrium patens HOM05D000434 ORTHO05D007220 7.9e-59 231.1 204 59.3
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 1.4e-58 230.3 204 62.7
Psat4g061760 Pisum sativum HOM05D000434 ORTHO05D007220 3.0e-58 229.2 204 62.3
Pp3c22_13970 Physcomitrium patens HOM05D000434 ORTHO05D007220 3.9e-58 228.8 204 60.8
GSVIVG01007621001 Vitis vinifera HOM05D000434 ORTHO05D007220 5.1e-58 228.4 206 61.7
Aa31sc402G20 Aethionema arabicum HOM05D000434 ORTHO05D007220 1.5e-57 226.9 200 62.0
Glyma.17G125100 Glycine max HOM05D000434 ORTHO05D007220 2.6e-57 226.1 192 65.6
HanXRQChr16g0504771 Helianthus annuus HOM05D000434 ORTHO05D007220 4.4e-57 225.3 203 59.6
Oeu019426.1 Olea europaea HOM05D000434 ORTHO05D007220 5.7e-57 224.9 188 65.4
Dinv20591 Davidia involucrata HOM05D000434 ORTHO05D007220 7.4e-57 224.6 191 62.8
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 9.7e-57 224.2 197 62.9
CSS0021677 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D007220 3.7e-56 222.2 203 60.1
Rhsim12G0168600 Rhododendron simsii HOM05D000434 ORTHO05D007220 3.7e-56 222.2 189 65.1
Peaxi162Scf00089g01235 Petunia axillaris HOM05D000434 ORTHO05D007220 6.3e-56 221.5 206 59.7
AagrBONN_evm.TU.Sc2ySwM_368.2356 Anthoceros agrestis HOM05D000434 ORTHO05D007220 3.1e-55 219.2 203 56.7
SMO367G0357 Selaginella moellendorffii HOM05D000434 ORTHO05D007220 5.9e-54 214.9 203 58.1
SGA_v2.0_scaffold90G27826 Striga asiatica HOM05D000434 ORTHO05D007220 5.5e-52 208.4 179 62.6
Psat5g209640 Pisum sativum HOM05D000434 ORTHO05D007220 1.6e-51 206.8 178 65.7
SalBow5G4295 Salvia bowleyana HOM05D000434 ORTHO05D007220 2.1e-51 206.5 178 62.4
SalBow5G3182 Salvia bowleyana HOM05D000434 ORTHO05D007220 1.0e-50 204.1 178 61.8
Mapoly0102s0006 Marchantia polymorpha HOM05D000434 ORTHO05D007220 1.7e-48 196.8 204 55.9
CBR_g20372 Chara braunii HOM05D000434 ORTHO05D007220 2.4e-47 193.0 231 48.5
CBR_g50939 Chara braunii HOM05D000434 ORTHO05D007220 1.5e-44 183.7 212 49.5
MCO05G483 Micromonas commoda HOM05D000434 ORTHO05D007220 5.2e-42 175.3 208 49.5
Cre06.g251450 Chlamydomonas reinhardtii HOM05D000434 ORTHO05D007220 2.0e-41 173.3 206 46.6
PRCOL_00006555 Prasinoderma coloniale HOM05D000434 ORTHO05D007220 6.8e-34 148.3 208 41.8
Phvul.010G094450 Phaseolus vulgaris HOM05D000434 ORTHO05D007220 1.6e-27 127.1 141 53.9
Psat0s171g0040 Pisum sativum HOM05D000434 ORTHO05D007220 1.4e-26 124.0 121 61.2
Psat0s2371g0040 Pisum sativum HOM05D000434 ORTHO05D006824 1.4e-26 124.0 121 61.2
Actinidia08038 Actinidia chinensis HOM05D000434 ORTHO05D007220 4.0e-26 122.5 106 67.0
Psat5g252720 Pisum sativum HOM05D000434 ORTHO05D007220 1.3e-21 107.5 70 77.1
Nn4g22565 Nelumbo nucifera HOM05D000434 ORTHO05D007220 5.8e-17 92.0 121 46.3
Actinidia08037 Actinidia chinensis HOM05D000434 ORTHO05D007220 2.5e-12 76.6 71 54.9
Psat6g059000 Pisum sativum HOM05D002708 ORTHO05D003516 4.3e-12 75.9 63 60.3
SGA_v2.0_scaffold106G30573 Striga asiatica HOM05D000434 ORTHO05D007220 8.1e-11 71.6 47 72.3


User provided reference genes

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