Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28642 Sequoiadendron giganteum HOM05D004074 ORTHO05D004717 3.1e-34 147.9 75 100.0
Actinidia21867 Actinidia chinensis HOM05D004074 ORTHO05D004717 1.8e-21 105.5 71 64.8
CSS0037999 Camellia sinensis var. sinensis HOM05D004074 ORTHO05D004717 1.8e-21 105.5 71 64.8
CSS0039874 Camellia sinensis var. sinensis HOM05D004074 ORTHO05D004717 1.8e-21 105.5 71 64.8
HanXRQChr10g0311531 Helianthus annuus HOM05D004074 ORTHO05D004717 2.3e-21 105.1 71 63.4
Lsat_1_v5_gn_4_88780 Lactuca sativa HOM05D004074 ORTHO05D004717 3.0e-21 104.8 64 67.2
ECA234G0987 Erigeron canadensis HOM05D004074 ORTHO05D004717 3.9e-21 104.4 64 67.2
Nn5g30428 Nelumbo nucifera HOM05D004074 ORTHO05D004717 5.2e-21 104.0 75 60.0
Nitab4.5_0002885g0120 Nicotiana tabacum HOM05D004074 ORTHO05D004717 5.2e-21 104.0 64 67.2
Duzib187G1118 Durio zibethinus HOM05D004074 ORTHO05D004717 6.7e-21 103.6 71 62.0
Manes.05G195000 Manihot esculenta HOM05D004074 ORTHO05D004717 6.7e-21 103.6 64 68.8
Nn6g31693 Nelumbo nucifera HOM05D004074 ORTHO05D004717 6.7e-21 103.6 75 60.0
Nn8g40291 Nelumbo nucifera HOM05D004074 ORTHO05D004717 6.7e-21 103.6 75 60.0
Nitab4.5_0007548g0020 Nicotiana tabacum HOM05D004074 ORTHO05D004717 6.7e-21 103.6 71 64.8
Nitab4.5_0008628g0040 Nicotiana tabacum HOM05D004074 ORTHO05D004717 6.7e-21 103.6 66 66.7
Solyc12g055760.2 Solanum lycopersicum HOM05D004074 ORTHO05D004717 6.7e-21 103.6 64 67.2
Zm00001eb161770 Zea mays HOM05D004074 ORTHO05D004717 6.7e-21 103.6 70 65.7
Actinidia38792 Actinidia chinensis HOM05D004074 ORTHO05D004717 8.8e-21 103.2 71 63.4
CDE02G0689 Ceratophyllum demersum HOM05D004074 ORTHO05D004717 8.8e-21 103.2 70 64.3
PGSC0003DMG400028842 Solanum tuberosum HOM05D004074 ORTHO05D004717 8.8e-21 103.2 70 64.3
Zm00001eb357940 Zea mays HOM05D004074 ORTHO05D004717 8.8e-21 103.2 68 63.2
BcaB04g19151 Brassica carinata HOM05D004074 ORTHO05D004717 1.1e-20 102.8 64 67.2
BcaC01g03518 Brassica carinata HOM05D004074 ORTHO05D004717 1.1e-20 102.8 64 67.2
HanXRQChr12g0359921 Helianthus annuus HOM05D004074 ORTHO05D004717 1.1e-20 102.8 71 60.6
Nitab4.5_0000357g0290 Nicotiana tabacum HOM05D004074 ORTHO05D004717 1.1e-20 102.8 61 73.8
Nitab4.5_0002661g0050 Nicotiana tabacum HOM05D004074 ORTHO05D004717 1.1e-20 102.8 66 66.7
Psat1g059640 Pisum sativum HOM05D004074 ORTHO05D004717 1.1e-20 102.8 69 63.8
Gohir.D12G001400 Gossypium hirsutum HOM05D004074 ORTHO05D004717 1.5e-20 102.4 71 62.0
Sopen12g024230 Solanum pennellii HOM05D004074 ORTHO05D004717 1.5e-20 102.4 64 65.6
Actinidia31138 Actinidia chinensis HOM05D004074 ORTHO05D004717 2.0e-20 102.1 64 67.2
CAN.G790.25 Capsicum annuum HOM05D004074 ORTHO05D004717 2.0e-20 102.1 61 70.5
CDE05G2863 Ceratophyllum demersum HOM05D004074 ORTHO05D004717 2.0e-20 102.1 70 61.4
PGSC0003DMG402009187 Solanum tuberosum HOM05D004074 ORTHO05D004717 2.0e-20 102.1 70 62.9
A08p02600 Brassica napus HOM05D004074 ORTHO05D004717 2.6e-20 101.7 64 64.1
BraA08t32299Z Brassica rapa HOM05D004074 ORTHO05D004717 2.6e-20 101.7 64 64.1
Gohir.D11G059000 Gossypium hirsutum HOM05D004074 ORTHO05D004717 2.6e-20 101.7 71 60.6
Gorai.007G063900 Gossypium raimondii HOM05D004074 ORTHO05D004717 2.6e-20 101.7 71 60.6
Hma1.2p1_0039F.1_g024790 Hydrangea macrophylla HOM05D004074 ORTHO05D004717 2.6e-20 101.7 64 67.2
Solyc06g063220.3 Solanum lycopersicum HOM05D004074 ORTHO05D004717 2.6e-20 101.7 71 60.6
Sopen06g022670 Solanum pennellii HOM05D004074 ORTHO05D004717 2.6e-20 101.7 71 60.6
TWI77G0047 Tripterygium wilfordii HOM05D004074 ORTHO05D004717 2.6e-20 101.7 64 67.2
CiPaw.01G088100 Carya illinoinensis HOM05D004074 ORTHO05D004717 3.3e-20 101.3 70 62.9
ClCG09G001480 Citrullus lanatus HOM05D004074 ORTHO05D004717 3.3e-20 101.3 64 67.2
Gorai.008G000800 Gossypium raimondii HOM05D004074 ORTHO05D004717 3.3e-20 101.3 71 60.6
PGSC0003DMG400026508 Solanum tuberosum HOM05D004074 ORTHO05D004717 3.3e-20 101.3 64 65.6
unitig_32.g11555 Utricularia gibba HOM05D004074 ORTHO05D004717 3.3e-20 101.3 71 63.4
Gohir.A12G001600 Gossypium hirsutum HOM05D004074 ORTHO05D004717 4.4e-20 100.9 71 60.6
MBI04_g18036_MAGBIO Magnolia biondii HOM05D004074 ORTHO05D004717 4.4e-20 100.9 65 66.2
MD09G1158500 Malus domestica HOM05D004074 ORTHO05D004717 4.4e-20 100.9 64 64.1
CAN.G1073.1 Capsicum annuum HOM05D004074 ORTHO05D004717 5.7e-20 100.5 61 68.9
Nitab4.5_0001691g0090 Nicotiana tabacum HOM05D004074 ORTHO05D004717 5.7e-20 100.5 62 67.7
Phvul.008G255900 Phaseolus vulgaris HOM05D004074 ORTHO05D004717 5.7e-20 100.5 71 60.6
TWI53G1078 Tripterygium wilfordii HOM05D004074 ORTHO05D004717 5.7e-20 100.5 69 62.3
FAN02G0872 Fragaria x ananassa HOM05D004074 ORTHO05D004717 7.4e-20 100.1 64 64.1
FAN05G0051 Fragaria x ananassa HOM05D004074 ORTHO05D004717 7.4e-20 100.1 64 64.1
FAN09G3199 Fragaria x ananassa HOM05D004074 ORTHO05D004717 7.4e-20 100.1 64 64.1
Gohir.A11G055200 Gossypium hirsutum HOM05D004074 ORTHO05D004717 7.4e-20 100.1 71 59.2
Actinidia00635 Actinidia chinensis HOM05D004074 ORTHO05D004717 9.7e-20 99.8 71 60.6
Actinidia25993 Actinidia chinensis HOM05D004074 ORTHO05D004717 9.7e-20 99.8 71 60.6
BcaB04g17185 Brassica carinata HOM05D004074 ORTHO05D004717 9.7e-20 99.8 64 64.1
Carub.0001s4049 Capsella rubella HOM05D004074 ORTHO05D004717 9.7e-20 99.8 64 64.1
CsaV3_7G033840 Cucumis sativus L. HOM05D004074 ORTHO05D004717 9.7e-20 99.8 64 65.6
DCAR_007668 Daucus carota HOM05D004074 ORTHO05D004717 9.7e-20 99.8 60 70.0
Duzib147G0570 Durio zibethinus HOM05D004074 ORTHO05D004717 9.7e-20 99.8 71 59.2
Glyma.07G003700 Glycine max HOM05D004074 ORTHO05D004717 9.7e-20 99.8 64 64.1
Prupe.3G167500 Prunus persica HOM05D004074 ORTHO05D004717 9.7e-20 99.8 64 64.1
BraA01t03480Z Brassica rapa HOM05D004074 ORTHO05D004717 1.3e-19 99.4 64 65.6
CARHR097100 Cardamine hirsuta HOM05D004074 ORTHO05D004717 1.3e-19 99.4 64 64.1
unitig_748.g7476 Utricularia gibba HOM05D004074 ORTHO05D004717 1.3e-19 99.4 72 62.5
vmacro18761 Vaccinium macrocarpon HOM05D004074 ORTHO05D004717 1.3e-19 99.4 69 62.3
AL1G59560 Arabidopsis lyrata HOM05D004074 ORTHO05D004717 1.7e-19 99.0 64 64.1
AT1G51650 Arabidopsis thaliana HOM05D004074 ORTHO05D004717 1.7e-19 99.0 64 64.1
BolC1t04251H Brassica oleracea HOM05D004074 ORTHO05D004717 1.7e-19 99.0 64 65.6
CARHR041810 Cardamine hirsuta HOM05D004074 ORTHO05D004717 1.7e-19 99.0 64 64.1
Glyma.08G222900 Glycine max HOM05D004074 ORTHO05D004717 1.7e-19 99.0 63 61.9
Os08g0250200 Oryza sativa ssp. japonica HOM05D004074 ORTHO05D004717 1.7e-19 99.0 63 65.1
Sp3g19200 Schrenkiella parvula HOM05D004074 ORTHO05D004717 1.7e-19 99.0 64 64.1
BcaB02g11264 Brassica carinata HOM05D004074 ORTHO05D004717 2.2e-19 98.6 64 64.1
BcaB04g20604 Brassica carinata HOM05D004074 ORTHO05D004717 2.2e-19 98.6 64 64.1
BcaNung05296 Brassica carinata HOM05D004074 ORTHO05D004717 2.2e-19 98.6 64 64.1
FvH4_6g37330 Fragaria vesca HOM05D004074 ORTHO05D004717 2.2e-19 98.6 64 62.5
Peaxi162Scf00038g02442 Petunia axillaris HOM05D004074 ORTHO05D004717 2.2e-19 98.6 61 67.2
RcHm_v2.0_Chr2g0150171 Rosa chinensis HOM05D004074 ORTHO05D004717 2.2e-19 98.6 64 62.5
Thecc.01G124200 Theobroma cacao HOM05D004074 ORTHO05D004717 2.2e-19 98.6 61 67.2
ATR0580G305 Amborella trichopoda HOM05D004074 ORTHO05D004717 2.8e-19 98.2 65 64.6
MELO3C024297.2 Cucumis melo HOM05D004074 ORTHO05D004717 2.8e-19 98.2 64 64.1
Dinv20359 Davidia involucrata HOM05D004074 ORTHO05D004717 2.8e-19 98.2 64 62.5
Dinv37799 Davidia involucrata HOM05D004074 ORTHO05D004717 2.8e-19 98.2 64 62.5
Duzib264G1024 Durio zibethinus HOM05D004074 ORTHO05D004717 2.8e-19 98.2 71 57.7
Sed0005809 Sechium edule HOM05D004074 ORTHO05D004717 2.8e-19 98.2 64 62.5
A01p33680 Brassica napus HOM05D004074 ORTHO05D004717 3.7e-19 97.8 64 64.1
C01p43050 Brassica napus HOM05D004074 ORTHO05D004717 3.7e-19 97.8 64 64.1
Cc01_g08930 Coffea canephora HOM05D004074 ORTHO05D004717 3.7e-19 97.8 71 60.6
Thhalv10011901m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 3.7e-19 97.8 64 62.5
Sp1g38290 Schrenkiella parvula HOM05D004074 ORTHO05D004717 3.7e-19 97.8 64 62.5
A05p19470 Brassica napus HOM05D004074 ORTHO05D004717 4.8e-19 97.4 64 64.1
BraA05t20851Z Brassica rapa HOM05D004074 ORTHO05D004717 4.8e-19 97.4 64 64.1
TPR.G2285 Trifolium pratense HOM05D004074 ORTHO05D004717 4.8e-19 97.4 71 57.7
HPP92_021730 Vanilla planifolia HOM05D004074 ORTHO05D004717 4.8e-19 97.4 66 66.7
BcaC08g43926 Brassica carinata HOM05D004074 ORTHO05D004717 6.3e-19 97.1 64 64.1
C06p13180 Brassica napus HOM05D004074 ORTHO05D004717 6.3e-19 97.1 64 64.1
BolC3t17439H Brassica oleracea HOM05D000606 ORTHO05D001265 6.3e-19 97.1 61 65.6
BolC6t36474H Brassica oleracea HOM05D004074 ORTHO05D004717 6.3e-19 97.1 64 64.1
BraA03t13364Z Brassica rapa HOM05D000606 ORTHO05D001265 6.3e-19 97.1 61 65.6
Migut.I01175 Erythranthe guttata HOM05D004074 ORTHO05D004717 6.3e-19 97.1 64 64.1
FAN14G4331 Fragaria x ananassa HOM05D004074 ORTHO05D004717 6.3e-19 97.1 62 62.9
Psat7g263760 Pisum sativum HOM05D004074 ORTHO05D004717 6.3e-19 97.1 75 58.7
PGR102G2231 Punica granatum HOM05D004074 ORTHO05D004717 6.3e-19 97.1 71 57.7
Hund11291 Selenicereus undatus HOM05D004074 ORTHO05D004717 6.3e-19 97.1 62 64.5
Cpa.g.sc1009.1 Carica papaya HOM05D004074 ORTHO05D004717 8.2e-19 96.7 61 67.2
Ciclev10026787m.g Citrus clementina HOM05D004074 ORTHO05D004717 1.1e-18 96.3 61 63.9
COL.COLO4_13992 Corchorus olitorius HOM05D004074 ORTHO05D004717 1.1e-18 96.3 61 63.9
Lj3g0011227 Lotus japonicus HOM05D004074 ORTHO05D004717 1.1e-18 96.3 68 61.8
Potri.010G250000 Populus trichocarpa HOM05D004074 ORTHO05D004717 1.1e-18 96.3 71 59.2
Rhsim08G0247900 Rhododendron simsii HOM05D004074 ORTHO05D004717 1.1e-18 96.3 62 64.5
THA.LOC104821596 Tarenaya hassleriana HOM05D004074 ORTHO05D004717 1.1e-18 96.3 64 59.4
Aa31LG10G3130 Aethionema arabicum HOM05D004074 ORTHO05D004717 1.4e-18 95.9 64 60.9
Potri.008G008900 Populus trichocarpa HOM05D004074 ORTHO05D004717 1.4e-18 95.9 71 57.7
arahy.Tifrunner.gnm1.ann1.9ZAP4M Arachis hypogaea HOM05D004074 ORTHO05D004717 1.8e-18 95.5 65 66.2
Thhalv10021996m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 2.4e-18 95.1 61 63.9
Rhsim06G0076700 Rhododendron simsii HOM05D004074 ORTHO05D004717 2.4e-18 95.1 61 65.6
Hund14448 Selenicereus undatus HOM05D004074 ORTHO05D004717 2.4e-18 95.1 69 56.5
TAR626G1506 Trochodendron aralioides HOM05D004074 ORTHO05D004717 2.4e-18 95.1 65 60.0
VMungo0647G0339 Vigna mungo HOM05D001270 ORTHO05D001099 3.1e-18 94.7 61 63.9
Haze_03743 Corylus avellana HOM05D004074 ORTHO05D004717 4.1e-18 94.4 62 59.7
Aqoxy7G03184 Aquilegia oxysepala HOM05D004074 ORTHO05D004717 5.3e-18 94.0 64 62.5
TAR383G0992 Trochodendron aralioides HOM05D004074 ORTHO05D004717 5.3e-18 94.0 65 58.5
CANSAT01G1956 Cannabis sativa HOM05D004074 ORTHO05D004717 7.0e-18 93.6 71 56.3
Oeu040350.2 Olea europaea HOM05D004074 ORTHO05D004717 7.0e-18 93.6 63 60.3
PSO170G4934 Papaver somniferum HOM05D004074 ORTHO05D004717 7.0e-18 93.6 67 59.7
SHI21232 Sapria himalayana HOM05D004074 ORTHO05D004717 7.0e-18 93.6 61 63.9
Ah.07g199420 Amaranthus hybridus HOM05D004074 ORTHO05D004717 9.1e-18 93.2 57 68.4
BolC8t49078H Brassica oleracea HOM05D004074 ORTHO05D004717 9.1e-18 93.2 61 62.3
Lalb_Chr25g0278611 Lupinus albus HOM05D004074 ORTHO05D004717 9.1e-18 93.2 64 59.4
PSO339G3796 Papaver somniferum HOM05D004074 ORTHO05D004717 9.1e-18 93.2 69 62.3
QL05p083316 Quercus lobata HOM05D004074 ORTHO05D004717 1.6e-17 92.4 60 61.7
EL10Ac5g12205 Beta vulgaris HOM05D004074 ORTHO05D004717 2.6e-17 91.7 61 62.3
QL05p083267 Quercus lobata HOM05D004074 ORTHO05D004717 3.5e-17 91.3 60 65.0
Sabra10G0194600 Salix brachista HOM05D004074 ORTHO05D004717 3.5e-17 91.3 61 62.3
Medtr5g040610 Medicago truncatula HOM05D004074 ORTHO05D004717 4.5e-17 90.9 69 53.6
SGA_v2.0_scaffold122G33290 Striga asiatica HOM05D004074 ORTHO05D004717 5.9e-17 90.5 60 63.3
Eucgr.F04009 Eucalyptus grandis HOM05D004074 ORTHO05D004717 7.7e-17 90.1 61 59.0
BcaC03g13642 Brassica carinata HOM05D000239 ORTHO05D004717 1.0e-16 89.7 64 59.4
BcaC09g49057 Brassica carinata HOM05D004074 ORTHO05D004717 1.0e-16 89.7 61 60.7
AUR62018789 Chenopodium quinoa HOM05D004074 ORTHO05D004717 1.7e-16 89.0 58 63.8
Aa31LG8G7900 Aethionema arabicum HOM05D004074 ORTHO05D004717 2.2e-16 88.6 61 60.7
C02p10320 Brassica napus HOM05D004074 ORTHO05D004717 2.2e-16 88.6 64 57.8
AagrBONN_evm.TU.Sc2ySwM_117.3571 Anthoceros agrestis HOM05D004074 ORTHO05D004717 2.9e-16 88.2 68 55.9
Aqoxy5G02869 Aquilegia oxysepala HOM05D004074 ORTHO05D004717 3.8e-16 87.8 67 53.7
C06p25410 Brassica napus HOM05D004074 ORTHO05D004717 3.8e-16 87.8 64 60.9
BolC6t37702H Brassica oleracea HOM05D004074 ORTHO05D004717 3.8e-16 87.8 64 60.9
BcaC08g44915 Brassica carinata HOM05D004074 ORTHO05D004717 6.5e-16 87.0 62 61.3
Sabra08G0005100 Salix brachista HOM05D004074 ORTHO05D004717 6.5e-16 87.0 61 59.0
SGA_v2.0_scaffold71G24013 Striga asiatica HOM05D001270 ORTHO05D001099 8.5e-16 86.7 60 60.0
AagrBONN_evm.TU.Sc2ySwM_344.1495 Anthoceros agrestis HOM05D004074 ORTHO05D004717 1.5e-15 85.9 68 54.4
SMO351G0623 Selaginella moellendorffii HOM05D004074 ORTHO05D004717 1.9e-15 85.5 57 63.2
HPP92_021648 Vanilla planifolia HOM05D004074 ORTHO05D004717 3.2e-15 84.7 74 59.5
Pp3c1_12120 Physcomitrium patens HOM05D004074 ORTHO05D004717 2.1e-14 82.0 72 54.2
MBI14_g24286_MAGBIO Magnolia biondii HOM05D004074 ORTHO05D004717 8.0e-14 80.1 48 62.5
GSVIVG01037184001 Vitis vinifera HOM05D004074 ORTHO05D004717 1.0e-13 79.7 61 52.5
Mapoly0001s0230 Marchantia polymorpha HOM05D004074 ORTHO05D004717 2.3e-13 78.6 74 52.7
Pp3c2_24870 Physcomitrium patens HOM05D004074 ORTHO05D004717 3.0e-13 78.2 68 50.0
Lsat_1_v5_gn_5_137500 Lactuca sativa HOM05D001270 ORTHO05D001099 6.8e-13 77.0 46 67.4
GSVIVG01037963001 Vitis vinifera HOM05D004074 ORTHO05D004717 6.8e-13 77.0 45 64.4
SalBow6G5392 Salvia bowleyana HOM05D004074 ORTHO05D004717 8.8e-13 76.6 47 63.8
C02p45000 Brassica napus HOM05D000128 ORTHO05D000059 1.3e-11 72.8 47 66.0
Thhalv10022333m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 2.2e-11 72.0 70 52.9
Zm00001eb394860 Zea mays HOM05D004074 ORTHO05D004717 1.4e-10 69.3 47 57.4
Pp3c1_10140 Physcomitrium patens HOM05D004074 ORTHO05D004717 1.2e-09 66.2 63 47.6
MCO11G253 Micromonas commoda HOM05D004074 ORTHO05D004717 1.6e-09 65.9 65 43.1
PSO455G0136 Papaver somniferum HOM05D004074 ORTHO05D004717 2.2e-08 62.0 44 65.9
PRCOL_00000946 Prasinoderma coloniale HOM05D004074 ORTHO05D004717 6.5e-08 60.5 49 51.0
Medtr4g005960 Medicago truncatula HOM05D004074 ORTHO05D004717 8.5e-08 60.1 53 49.1
Cre10.g420700 Chlamydomonas reinhardtii HOM05D004074 ORTHO05D004717 1.2e-06 56.2 53 47.2


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