Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 9.6e-52 206.5 98 100.0
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 1.6e-46 189.1 98 90.8
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 1.6e-46 189.1 98 90.8
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 6.1e-46 187.2 98 88.8
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 6.1e-46 187.2 98 88.8
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 1.8e-45 185.7 98 86.7
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 3.0e-45 184.9 98 86.7
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 3.9e-45 184.5 98 85.7
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 3.9e-45 184.5 98 87.8
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 5.1e-45 184.1 98 86.7
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 5.1e-45 184.1 98 86.7
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 5.1e-45 184.1 98 84.7
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 6.7e-45 183.7 98 84.7
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 1.1e-44 183.0 98 85.7
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 1.5e-44 182.6 98 86.7
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 1.9e-44 182.2 98 86.7
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 1.9e-44 182.2 98 86.7
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 1.9e-44 182.2 98 84.7
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 1.9e-44 182.2 98 84.7
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 1.9e-44 182.2 98 85.7
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.9e-44 182.2 98 85.7
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 2.5e-44 181.8 98 85.7
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 2.5e-44 181.8 98 85.7
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 3.3e-44 181.4 98 85.7
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 3.3e-44 181.4 97 85.6
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 4.3e-44 181.0 98 84.7
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 4.3e-44 181.0 98 83.7
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 4.3e-44 181.0 98 83.7
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 4.3e-44 181.0 98 84.7
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 4.3e-44 181.0 98 83.7
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 4.3e-44 181.0 98 83.7
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 5.7e-44 180.6 98 82.7
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 5.7e-44 180.6 98 83.7
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 5.7e-44 180.6 98 83.7
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 5.7e-44 180.6 98 83.7
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 5.7e-44 180.6 98 83.7
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 5.7e-44 180.6 98 84.7
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 7.4e-44 180.3 98 82.7
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 7.4e-44 180.3 98 83.7
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 7.4e-44 180.3 98 83.7
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 7.4e-44 180.3 98 83.7
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 9.7e-44 179.9 98 84.7
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 9.7e-44 179.9 98 81.6
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 9.7e-44 179.9 98 81.6
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 9.7e-44 179.9 98 81.6
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 9.7e-44 179.9 98 81.6
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 9.7e-44 179.9 98 83.7
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 9.7e-44 179.9 98 83.7
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 9.7e-44 179.9 98 81.6
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 9.7e-44 179.9 98 81.6
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 1.3e-43 179.5 98 82.7
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 1.3e-43 179.5 98 80.6
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 1.3e-43 179.5 98 80.6
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.3e-43 179.5 98 85.7
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 1.3e-43 179.5 98 83.7
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.6e-43 179.1 98 82.7
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 1.6e-43 179.1 98 83.7
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 1.6e-43 179.1 98 83.7
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 1.6e-43 179.1 97 84.5
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 2.2e-43 178.7 98 80.6
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 2.2e-43 178.7 98 81.6
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 2.8e-43 178.3 98 82.7
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 2.8e-43 178.3 98 82.7
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 3.7e-43 177.9 98 81.6
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 3.7e-43 177.9 98 82.7
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 3.7e-43 177.9 98 82.7
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 3.7e-43 177.9 98 82.7
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 3.7e-43 177.9 98 82.7
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 4.8e-43 177.6 98 82.7
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 4.8e-43 177.6 98 82.7
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 6.3e-43 177.2 98 82.7
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 6.3e-43 177.2 98 82.7
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 8.2e-43 176.8 98 81.6
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 8.2e-43 176.8 98 81.6
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 8.2e-43 176.8 98 82.7
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 8.2e-43 176.8 98 81.6
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 8.2e-43 176.8 98 84.7
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 8.2e-43 176.8 98 82.7
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 8.2e-43 176.8 98 81.6
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 1.1e-42 176.4 98 83.7
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 1.1e-42 176.4 98 80.6
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 1.1e-42 176.4 98 81.6
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 1.1e-42 176.4 98 80.6
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.4e-42 176.0 98 80.6
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.4e-42 176.0 98 80.6
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.4e-42 176.0 98 80.6
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 1.4e-42 176.0 98 81.6
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 1.4e-42 176.0 98 82.7
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.8e-42 175.6 98 81.6
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 1.8e-42 175.6 98 83.7
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 1.8e-42 175.6 98 83.7
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 1.8e-42 175.6 98 80.6
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 2.4e-42 175.3 98 82.7
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 2.4e-42 175.3 98 80.6
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 3.1e-42 174.9 98 82.7
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 3.1e-42 174.9 98 83.7
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 3.1e-42 174.9 98 83.7
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 3.1e-42 174.9 98 83.7
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 3.1e-42 174.9 98 83.7
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 3.1e-42 174.9 98 80.6
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 3.1e-42 174.9 98 80.6
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 3.1e-42 174.9 98 80.6
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 3.1e-42 174.9 98 80.6
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 4.1e-42 174.5 98 82.7
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 4.1e-42 174.5 98 79.6
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 5.3e-42 174.1 98 79.6
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 5.3e-42 174.1 98 82.7
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 5.3e-42 174.1 98 83.7
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 5.3e-42 174.1 98 79.6
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 6.9e-42 173.7 98 82.7
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 6.9e-42 173.7 98 79.6
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 6.9e-42 173.7 98 82.7
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 6.9e-42 173.7 98 81.6
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 9.0e-42 173.3 98 81.6
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 2.6e-41 171.8 98 78.6
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 2.6e-41 171.8 98 78.6
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 2.6e-41 171.8 98 78.6
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 3.4e-41 171.4 98 80.6
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 3.4e-41 171.4 98 78.6
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 3.4e-41 171.4 98 79.6
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 3.4e-41 171.4 98 78.6
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 4.5e-41 171.0 98 80.6
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 4.5e-41 171.0 97 79.4
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 1.3e-40 169.5 98 79.6
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 1.3e-40 169.5 98 77.6
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 1.3e-40 169.5 98 76.5
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 2.2e-40 168.7 98 76.5
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 5.0e-40 167.5 98 77.6
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 8.5e-40 166.8 98 77.6
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 8.5e-40 166.8 98 75.5
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 1.4e-39 166.0 97 76.3
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 2.5e-39 165.2 98 76.5
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 2.5e-39 165.2 98 76.5
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 3.2e-39 164.9 98 74.5
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 1.6e-38 162.5 92 77.2
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 1.6e-38 162.5 98 74.5
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 2.1e-38 162.2 98 75.5
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 2.5e-36 155.2 94 75.5
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 2.2e-35 152.1 84 82.1
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 4.8e-35 151.0 84 77.4
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 2.4e-34 148.7 80 82.5
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 4.1e-34 147.9 95 69.5
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 5.0e-32 141.0 98 67.3
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 1.4e-31 139.4 98 70.4
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 2.7e-30 135.2 78 79.5
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 1.4e-29 132.9 98 67.3
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 5.1e-29 131.0 71 83.1
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 1.5e-28 129.4 96 58.3
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 4.1e-26 121.3 64 85.9
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 1.3e-24 116.3 60 86.7
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 2.2e-24 115.5 98 58.2
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 7.2e-23 110.5 59 83.1
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 2.8e-19 98.6 81 53.1
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 3.6e-14 81.6 44 77.3
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 2.6e-12 75.5 46 78.3
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 9.8e-12 73.6 41 80.5
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 4.8e-11 71.2 41 78.0
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 1.1e-10 70.1 68 51.5
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 4.1e-10 68.2 39 74.4
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 4.1e-10 68.2 35 85.7
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 3.5e-09 65.1 35 80.0


User provided reference genes

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