Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28448 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1129.4 560 100.0
SEGI_09628 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.0e-299 1031.2 627 84.2
SEGI_30043 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.0e-299 1031.2 627 84.2
SEGI_30045 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.0e-294 1013.8 736 73.5
SEGI_39398 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.2e-293 1011.1 736 73.4
SEGI_01619 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.1e-291 1003.8 736 72.8
SEGI_00654 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.5e-290 1001.5 736 73.0
SEGI_08978 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.8e-281 970.7 721 72.3
SEGI_39080 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.9e-241 837.8 645 69.8
SEGI_11424 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.2e-220 767.7 733 56.3
SEGI_25194 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.2e-217 759.2 601 68.4
SEGI_34953 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 8.4e-193 677.6 622 58.8
SEGI_01018 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.2e-192 675.6 647 56.9
SEGI_12977 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 8.5e-169 597.8 520 63.8
SEGI_13303 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.3e-164 581.6 612 51.5
SEGI_14024 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.0e-158 562.4 312 91.0
SEGI_21011 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.8e-134 481.9 313 78.0
SEGI_02873 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.0e-130 468.8 296 79.4
SEGI_01179 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.6e-128 462.2 335 70.7
SEGI_24191 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.2e-126 455.7 307 75.6
SEGI_24051 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.5e-120 437.6 475 50.3
SEGI_05518 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 9.2e-115 418.3 320 68.1
SEGI_00994 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.4e-108 395.6 251 74.9
SEGI_00547 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.3e-104 382.1 241 77.2
SEGI_04345 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.6e-103 379.8 251 71.3
SEGI_11933 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 2.3e-97 360.5 251 68.1
SEGI_39857 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.9e-81 306.6 198 76.8
SEGI_10716 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.4e-80 302.4 183 77.6
SEGI_27237 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.3e-71 275.0 217 62.7
SEGI_17597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.8e-63 247.3 264 49.6
SEGI_19415 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.8e-63 247.3 246 54.5
PSO017G5635 Papaver somniferum HOM05D007914 ORTHO05D006902 3.5e-45 187.2 355 36.3
SEGI_40659 Sequoiadendron giganteum HOM05D000044 ORTHO05D006634 1.1e-43 182.2 209 48.3
SEGI_27597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.5e-43 179.9 198 48.5
SEGI_22032 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.6e-42 178.3 112 80.4
SEGI_29479 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.4e-41 175.3 176 51.7
PSO384G4122 Papaver somniferum HOM05D007914 ORTHO05D006902 7.5e-40 169.5 353 36.0
SEGI_27643 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.1e-38 165.6 247 38.1
SEGI_25095 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.9e-37 159.8 236 38.6
SEGI_19677 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.9e-36 157.5 124 65.3
SEGI_07585 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.2e-35 153.7 171 47.4
SEGI_17638 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.7e-34 150.2 152 51.3
SEGI_00079 Sequoiadendron giganteum HOM05D000773 ORTHO05D000588 8.0e-34 149.4 179 43.6
SEGI_11766 Sequoiadendron giganteum HOM05D007936 ORTHO05D009941 4.0e-33 147.1 205 38.0
SEGI_15588 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.0e-33 147.1 151 50.3
SEGI_24050 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.0e-29 134.8 110 60.9
SEGI_12989 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.5e-24 116.3 149 41.6
SEGI_11812 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.3e-23 115.5 71 81.7
PSO675G2703 Papaver somniferum HOM05D007914 ORTHO05D006902 1.7e-23 115.2 247 34.0
SEGI_08534 Sequoiadendron giganteum HOM05D000026 ORTHO05D000094 7.0e-22 109.8 142 43.0
Lalb_Chr20g0114131 Lupinus albus HOM05D008038 ORTHO05D006902 2.7e-21 107.8 302 30.8
SEGI_20543 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.5e-21 107.5 121 47.1
Ah.15g095480 Amaranthus hybridus HOM05D008038 ORTHO05D006902 1.5e-19 102.1 281 31.3
Actinidia11192 Actinidia chinensis HOM05D008038 ORTHO05D006902 3.3e-19 100.9 286 32.2
arahy.Tifrunner.gnm1.ann1.6HAR6G Arachis hypogaea HOM05D008038 ORTHO05D006902 3.3e-19 100.9 290 33.4
SEGI_11065 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 9.5e-19 99.4 146 39.7
SEGI_34863 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 9.5e-19 99.4 190 38.9
Hund18510 Selenicereus undatus HOM05D008038 ORTHO05D006902 6.1e-18 96.7 294 29.6
Lj6g0001787 Lotus japonicus HOM05D008038 ORTHO05D006902 1.0e-17 95.9 291 32.3
Lj6g0005294 Lotus japonicus HOM05D008038 ORTHO05D006902 1.4e-17 95.5 324 27.2
Duzib264G0258 Durio zibethinus HOM05D008038 ORTHO05D006902 1.8e-17 95.1 283 30.4
Rhsim06G0121400 Rhododendron simsii HOM05D008038 ORTHO05D006902 5.2e-17 93.6 285 30.2
Glyma.08G310900 Glycine max HOM05D008038 ORTHO05D006902 8.9e-17 92.8 302 27.2
SEGI_08593 Sequoiadendron giganteum HOM05D000074 ORTHO05D001793 2.0e-16 91.7 116 43.1
Thecc.01G159700 Theobroma cacao HOM05D008038 ORTHO05D006902 4.4e-16 90.5 282 29.1
PGR142G1605 Punica granatum HOM05D008038 ORTHO05D006902 7.5e-16 89.7 282 29.1
Eucgr.K01193 Eucalyptus grandis HOM05D008038 ORTHO05D006902 9.8e-16 89.4 285 28.1
Nn1g09358 Nelumbo nucifera HOM05D008038 ORTHO05D006902 1.3e-15 89.0 342 27.2
Sc10g0010300 Simmondsia chinensis HOM05D008038 ORTHO05D006902 1.3e-15 89.0 287 28.6
arahy.Tifrunner.gnm1.ann1.I6EGUB Arachis hypogaea HOM05D008038 ORTHO05D006902 1.7e-15 88.6 291 30.9
SEGI_11932 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.7e-15 88.6 93 43.0
SEGI_33240 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 1.7e-15 88.6 335 25.4
SEGI_40854 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.7e-15 87.4 255 27.8
SGA_v2.0_scaffold46G17483 Striga asiatica HOM05D008038 ORTHO05D006902 3.7e-15 87.4 283 28.6
EL10Ac7g18043 Beta vulgaris HOM05D008038 ORTHO05D006902 4.9e-15 87.0 284 30.6
Manes.02G085900 Manihot esculenta HOM05D008038 ORTHO05D006902 4.9e-15 87.0 287 28.9
Prupe.3G170200 Prunus persica HOM05D008038 ORTHO05D006902 8.3e-15 86.3 286 26.9
PSO675G5731 Papaver somniferum HOM05D008038 ORTHO05D006902 1.1e-14 85.9 284 28.5
Cc05_g09210 Coffea canephora HOM05D008038 ORTHO05D006902 1.4e-14 85.5 304 26.3
Potri.007G054500 Populus trichocarpa HOM05D008038 ORTHO05D006902 1.9e-14 85.1 285 27.0
unitig_899.g15335 Utricularia gibba HOM05D008038 ORTHO05D006902 1.9e-14 85.1 321 27.1
Mapoly0078s0037 Marchantia polymorpha HOM05D008038 ORTHO05D006902 3.2e-14 84.3 300 27.3
PRCOL_00003757 Prasinoderma coloniale HOM05D008038 ORTHO05D006902 3.2e-14 84.3 328 28.7
AUR62034636 Chenopodium quinoa HOM05D008038 ORTHO05D006902 4.1e-14 84.0 286 29.7
Nn1g09359 Nelumbo nucifera HOM05D008038 ORTHO05D006902 4.1e-14 84.0 282 29.8
CiPaw.04G110800 Carya illinoinensis HOM05D008038 ORTHO05D006902 5.4e-14 83.6 284 26.8
PSO541G6518 Papaver somniferum HOM05D008038 ORTHO05D006902 5.4e-14 83.6 284 28.9
FvH4_6g37811 Fragaria vesca HOM05D008038 ORTHO05D006902 1.6e-13 82.0 282 29.8
QL08p043670 Quercus lobata HOM05D008038 ORTHO05D006902 2.0e-13 81.6 318 27.7
SEGI_04810 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 2.7e-13 81.3 318 25.8
Dinv12709 Davidia involucrata HOM05D008038 ORTHO05D006902 4.6e-13 80.5 326 25.8
TAR375G0666 Trochodendron aralioides HOM05D008038 ORTHO05D006902 4.6e-13 80.5 291 28.2
AagrBONN_evm.TU.Sc2ySwM_368.536 Anthoceros agrestis HOM05D008038 ORTHO05D006902 7.8e-13 79.7 376 25.5
COL.COLO4_33719 Corchorus olitorius HOM05D008038 ORTHO05D006902 7.8e-13 79.7 287 29.3
Cre09.g417400 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.0e-12 79.3 332 27.1
CAN.G1481.7 Capsicum annuum HOM05D008038 ORTHO05D006902 1.3e-12 79.0 279 28.0
Cre02.g142987 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.3e-12 79.0 346 26.0
Cre45.g760847 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.3e-12 79.0 346 26.0
Dinv12711 Davidia involucrata HOM05D008038 ORTHO05D006902 1.7e-12 78.6 282 26.2
PGSC0003DMG400017364 Solanum tuberosum HOM05D008038 ORTHO05D006902 1.7e-12 78.6 299 27.4
AUR62036633 Chenopodium quinoa HOM05D008038 ORTHO05D006902 2.3e-12 78.2 283 30.0
PSO675G0998 Papaver somniferum HOM05D007914 ORTHO05D023061 2.3e-12 78.2 250 26.0
COL.COLO4_07289 Corchorus olitorius HOM05D008038 ORTHO05D006902 3.0e-12 77.8 412 27.4
Haze_15932 Corylus avellana HOM05D008038 ORTHO05D006902 3.9e-12 77.4 289 27.7
Nitab4.5_0002737g0020 Nicotiana tabacum HOM05D008038 ORTHO05D006902 3.9e-12 77.4 299 26.1
Cre32.g758797 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 8.6e-12 76.3 335 25.7
Sopen07g029260 Solanum pennellii HOM05D008038 ORTHO05D006902 1.1e-11 75.9 299 27.4
Aqoxy6G01155 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 1.5e-11 75.5 290 28.3
MSTRG.6764 Avicennia marina HOM05D008038 ORTHO05D006902 1.5e-11 75.5 289 28.0
SEGI_01490 Sequoiadendron giganteum HOM05D000526 ORTHO05D000956 2.5e-11 74.7 60 61.7
Solyc07g055900.1 Solanum lycopersicum HOM05D008038 ORTHO05D006902 3.3e-11 74.3 289 27.7
COL.COLO4_25756 Corchorus olitorius HOM05D008038 ORTHO05D006902 9.5e-11 72.8 334 27.8
PSO541G2104 Papaver somniferum HOM05D007914 ORTHO05D023061 9.5e-11 72.8 248 26.2
Aqoxy6G01154 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 1.2e-10 72.4 319 26.6
PSO541G1774 Papaver somniferum HOM05D007914 ORTHO05D006902 1.2e-10 72.4 88 43.2
SEGI_29989 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 8.0e-10 69.7 51 56.9
SEGI_39030 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 8.0e-10 69.7 322 25.2
Oeu026475.1 Olea europaea HOM05D008038 ORTHO05D006902 4.0e-09 67.4 285 26.0
SEGI_23982 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 8.9e-09 66.2 75 40.0
SEGI_12776 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.5e-08 65.5 62 53.2
CANSAT64G2812 Cannabis sativa HOM05D008038 ORTHO05D006902 9.8e-08 62.8 306 23.9
SEGI_17357 Sequoiadendron giganteum HOM05D000824 ORTHO05D006902 8.3e-07 59.7 97 33.0
CANSAT64G1128 Cannabis sativa HOM05D008038 ORTHO05D006902 1.9e-06 58.5 370 22.2
SEGI_30585 Sequoiadendron giganteum HOM05D000280 ORTHO05D004091 1.9e-06 58.5 92 39.1
Pp3c20_2590 Physcomitrium patens HOM05D008038 ORTHO05D006902 2.4e-06 58.2 357 22.1
CiPaw.01G177700 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.4e-06 57.0 151 31.8


User provided reference genes

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