Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28426 Sequoiadendron giganteum HOM05D005748 ORTHO05D007123 2.5e-74 282.0 136 100.0
SEGI_11782 Sequoiadendron giganteum HOM05D005748 ORTHO05D007123 1.1e-45 186.8 91 100.0
arahy.Tifrunner.gnm1.ann1.LQ9P86 Arachis hypogaea HOM05D005748 ORTHO05D007123 2.7e-12 75.9 70 57.1
COL.COLO4_24224 Corchorus olitorius HOM05D005748 ORTHO05D007123 2.7e-12 75.9 43 79.1
PSO478G3396 Papaver somniferum HOM05D005748 ORTHO05D007123 4.7e-12 75.1 52 69.2
TWI18G0424 Tripterygium wilfordii HOM05D005748 ORTHO05D007123 4.7e-12 75.1 46 73.9
arahy.Tifrunner.gnm1.ann1.UR7RZY Arachis hypogaea HOM05D005748 ORTHO05D007123 6.1e-12 74.7 54 63.0
CiPaw.06G069600 Carya illinoinensis HOM05D005748 ORTHO05D007123 6.1e-12 74.7 46 78.3
Migut.E00183 Erythranthe guttata HOM05D005748 ORTHO05D007123 6.1e-12 74.7 43 81.4
Gohir.A01G160000 Gossypium hirsutum HOM05D005748 ORTHO05D007123 6.1e-12 74.7 41 82.9
Gohir.D01G150000 Gossypium hirsutum HOM05D005748 ORTHO05D007123 6.1e-12 74.7 41 82.9
Gorai.002G186100 Gossypium raimondii HOM05D005748 ORTHO05D007123 6.1e-12 74.7 41 82.9
RcHm_v2.0_Chr4g0433541 Rosa chinensis HOM05D005748 ORTHO05D007123 6.1e-12 74.7 46 73.9
MD16G1097300 Malus domestica HOM05D005748 ORTHO05D007123 7.9e-12 74.3 46 73.9
PSO017G4278 Papaver somniferum HOM05D005748 ORTHO05D007123 7.9e-12 74.3 89 49.4
Nitab4.5_0003520g0030 Nicotiana tabacum HOM05D005748 ORTHO05D007123 1.4e-11 73.6 60 61.7
Ah.07g200380 Amaranthus hybridus HOM05D005748 ORTHO05D007123 2.3e-11 72.8 46 76.1
CAN.G8.38 Capsicum annuum HOM05D005748 ORTHO05D007123 2.3e-11 72.8 52 69.2
ClCG08G017810 Citrullus lanatus HOM05D005748 ORTHO05D007123 2.3e-11 72.8 46 73.9
Nitab4.5_0000160g0130 Nicotiana tabacum HOM05D005748 ORTHO05D007123 2.3e-11 72.8 54 64.8
Actinidia08146 Actinidia chinensis HOM05D005748 ORTHO05D007123 3.0e-11 72.4 43 76.7
Duzib248G1559 Durio zibethinus HOM05D005748 ORTHO05D007123 3.0e-11 72.4 43 74.4
FvH4_4g26080 Fragaria vesca HOM05D005748 ORTHO05D007123 3.0e-11 72.4 46 69.6
Solyc12g019010.2 Solanum lycopersicum HOM05D005748 ORTHO05D007123 3.0e-11 72.4 41 80.5
Sopen12g009240 Solanum pennellii HOM05D005748 ORTHO05D007123 3.0e-11 72.4 41 80.5
PGSC0003DMG400020380 Solanum tuberosum HOM05D005748 ORTHO05D007123 3.0e-11 72.4 41 80.5
Thecc.02G255300 Theobroma cacao HOM05D005748 ORTHO05D007123 3.0e-11 72.4 41 78.0
Atru.chr11.2076 Acer truncatum HOM05D005748 ORTHO05D007123 3.9e-11 72.0 60 60.0
CSS0032355 Camellia sinensis var. sinensis HOM05D005748 ORTHO05D007123 3.9e-11 72.0 43 74.4
FAN12G3013 Fragaria x ananassa HOM05D005748 ORTHO05D007123 3.9e-11 72.0 46 69.6
Prupe.1G249500 Prunus persica HOM05D005748 ORTHO05D007123 5.1e-11 71.6 41 78.0
RhsimUnG0110900 Rhododendron simsii HOM05D005748 ORTHO05D007123 5.1e-11 71.6 46 71.7
MSTRG.2407 Avicennia marina HOM05D005748 ORTHO05D007123 6.7e-11 71.2 42 78.6
Dinv15258 Davidia involucrata HOM05D005748 ORTHO05D007123 6.7e-11 71.2 46 73.9
FAN22G2132 Fragaria x ananassa HOM05D005748 ORTHO05D007123 6.7e-11 71.2 46 69.6
Hma1.2p1_0223F.1_g094270 Hydrangea macrophylla HOM05D005748 ORTHO05D007123 6.7e-11 71.2 57 59.6
PGR119G1070 Punica granatum HOM05D005748 ORTHO05D007123 6.7e-11 71.2 82 48.8
SGA_v2.0_scaffold87G27097 Striga asiatica HOM05D005748 ORTHO05D007123 6.7e-11 71.2 43 76.7
EL10Ac6g13715 Beta vulgaris HOM05D005748 ORTHO05D007123 8.8e-11 70.9 41 75.6
FvH4_4g26060 Fragaria vesca HOM05D005748 ORTHO05D007123 8.8e-11 70.9 46 67.4
Peaxi162Scf00057g02525 Petunia axillaris HOM05D005748 ORTHO05D007123 8.8e-11 70.9 39 82.1
Potri.008G188600 Populus trichocarpa HOM05D005748 ORTHO05D007123 8.8e-11 70.9 44 75.0
AUR62005423 Chenopodium quinoa HOM05D005748 ORTHO05D007123 1.1e-10 70.5 41 80.5
AUR62014085 Chenopodium quinoa HOM05D005748 ORTHO05D007123 1.1e-10 70.5 46 73.9
FAN17G1434 Fragaria x ananassa HOM05D005748 ORTHO05D007123 1.1e-10 70.5 46 69.6
Lj2g0027284 Lotus japonicus HOM05D005748 ORTHO05D007123 1.1e-10 70.5 39 82.1
GSVIVG01013791001 Vitis vinifera HOM05D005748 ORTHO05D007123 1.1e-10 70.5 41 78.0
Aa31LG7G7390 Aethionema arabicum HOM05D005748 ORTHO05D007123 1.5e-10 70.1 49 65.3
arahy.Tifrunner.gnm1.ann1.HNNS3P Arachis hypogaea HOM05D005748 ORTHO05D007123 1.5e-10 70.1 46 69.6
Nn3g16801 Nelumbo nucifera HOM05D005748 ORTHO05D007123 1.5e-10 70.1 89 50.6
Oeu056727.1 Olea europaea HOM05D005748 ORTHO05D007123 1.5e-10 70.1 61 60.7
Psat2g103560 Pisum sativum HOM05D005748 ORTHO05D007123 1.5e-10 70.1 41 78.0
Sabra08G0142800 Salix brachista HOM05D005748 ORTHO05D007123 1.5e-10 70.1 44 72.7
SalBow8G2650 Salvia bowleyana HOM05D005748 ORTHO05D007123 1.5e-10 70.1 43 74.4
Ciclev10032509m.g Citrus clementina HOM05D005748 ORTHO05D007123 2.0e-10 69.7 41 73.2
ECA233G4637 Erigeron canadensis HOM05D005748 ORTHO05D007123 2.0e-10 69.7 40 77.5
Eucgr.H02539 Eucalyptus grandis HOM05D005748 ORTHO05D007123 2.0e-10 69.7 41 75.6
TAR622G1138 Trochodendron aralioides HOM05D005748 ORTHO05D007123 2.0e-10 69.7 43 72.1
GSVIVG01013797001 Vitis vinifera HOM05D005748 ORTHO05D007123 2.0e-10 69.7 46 69.6
DCAR_021512 Daucus carota HOM05D005748 ORTHO05D007123 2.6e-10 69.3 52 67.3
Actinidia27797 Actinidia chinensis HOM05D005748 ORTHO05D007123 3.3e-10 68.9 41 75.6
FAN07G0627 Fragaria x ananassa HOM05D005748 ORTHO05D007123 3.3e-10 68.9 54 59.3
TPR.G22385 Trifolium pratense HOM05D005748 ORTHO05D007123 3.3e-10 68.9 45 71.1
Ca_04590_v3 Cicer arietinum L. HOM05D005748 ORTHO05D007123 4.4e-10 68.6 45 71.1
MELO3C010679.2 Cucumis melo HOM05D005748 ORTHO05D007123 4.4e-10 68.6 45 71.1
Lsat_1_v5_gn_8_154441 Lactuca sativa HOM05D005748 ORTHO05D007123 4.4e-10 68.6 41 73.2
Lj3C1055T9 Lonicera japonica HOM05D005748 ORTHO05D007123 4.4e-10 68.6 41 75.6
Manes.12G025500 Manihot esculenta HOM05D005748 ORTHO05D007123 4.4e-10 68.6 46 67.4
Sed0017321 Sechium edule HOM05D005748 ORTHO05D007123 4.4e-10 68.6 43 69.8
CANSAT01G2054 Cannabis sativa HOM05D005748 ORTHO05D007123 5.7e-10 68.2 37 81.1
CARHR023810 Cardamine hirsuta HOM05D005748 ORTHO05D007123 5.7e-10 68.2 41 75.6
CDE02G4569 Ceratophyllum demersum HOM05D005748 ORTHO05D007123 7.4e-10 67.8 40 75.0
Haze_12219 Corylus avellana HOM05D005748 ORTHO05D007123 7.4e-10 67.8 65 60.0
CsaV3_2G024810 Cucumis sativus L. HOM05D005748 ORTHO05D007123 7.4e-10 67.8 45 68.9
Glyma.01G028200 Glycine max HOM05D005748 ORTHO05D007123 7.4e-10 67.8 61 55.7
HanXRQChr12g0371641 Helianthus annuus HOM05D005748 ORTHO05D007123 7.4e-10 67.8 40 75.0
MD13G1095900 Malus domestica HOM05D005748 ORTHO05D007123 7.4e-10 67.8 51 66.7
Pp3c5_15050 Physcomitrium patens HOM05D005748 ORTHO05D007123 7.4e-10 67.8 82 46.3
QL03p058965 Quercus lobata HOM05D005748 ORTHO05D007123 7.4e-10 67.8 45 66.7
unitig_22.g5531 Utricularia gibba HOM05D005748 ORTHO05D007123 7.4e-10 67.8 44 65.9
VMungo1215G1762 Vigna mungo HOM05D005748 ORTHO05D007123 7.4e-10 67.8 46 67.4
FAN12G4111 Fragaria x ananassa HOM05D005748 ORTHO05D007123 9.7e-10 67.4 46 65.2
Lalb_Chr16g0382091 Lupinus albus HOM05D005748 ORTHO05D007123 9.7e-10 67.4 41 73.2
Medtr5g033700 Medicago truncatula HOM05D005748 ORTHO05D007123 9.7e-10 67.4 53 60.4
Sc04g0009320 Simmondsia chinensis HOM05D005748 ORTHO05D007123 9.7e-10 67.4 41 78.0
BcaB03g11936 Brassica carinata HOM05D005748 ORTHO05D007123 1.3e-09 67.0 37 81.1
BcaC07g39197 Brassica carinata HOM05D005748 ORTHO05D007123 1.3e-09 67.0 58 60.3
A08p28200 Brassica napus HOM05D005748 ORTHO05D007123 1.3e-09 67.0 58 60.3
C08p21870 Brassica napus HOM05D005748 ORTHO05D007123 1.3e-09 67.0 58 60.3
BolC8t49826H Brassica oleracea HOM05D005748 ORTHO05D007123 1.3e-09 67.0 58 60.3
BraA08t34751Z Brassica rapa HOM05D005748 ORTHO05D007123 1.3e-09 67.0 58 60.3
Thhalv10008293m.g Eutrema salsugineum HOM05D005748 ORTHO05D007123 1.3e-09 67.0 36 83.3
vmacro11161 Vaccinium macrocarpon HOM05D005748 ORTHO05D007123 1.3e-09 67.0 46 63.0
Glyma.02G037000 Glycine max HOM05D005748 ORTHO05D007123 1.7e-09 66.6 64 53.1
Hma1.2p1_0223F.1_g094280 Hydrangea macrophylla HOM05D005748 ORTHO05D007123 1.7e-09 66.6 57 56.1
QL03p059002 Quercus lobata HOM05D005748 ORTHO05D007123 1.7e-09 66.6 46 65.2
Aqoxy3G02861 Aquilegia oxysepala HOM05D005748 ORTHO05D007123 2.2e-09 66.2 40 72.5
Phvul.002G064000 Phaseolus vulgaris HOM05D005748 ORTHO05D007123 2.2e-09 66.2 57 57.9
Sp1g20810 Schrenkiella parvula HOM05D005748 ORTHO05D007123 2.2e-09 66.2 67 53.7
Cc11_g15440 Coffea canephora HOM05D005748 ORTHO05D007123 2.8e-09 65.9 57 56.1
Hund06012 Selenicereus undatus HOM05D005748 ORTHO05D007123 2.8e-09 65.9 41 73.2
Carub.0001s2295 Capsella rubella HOM05D005748 ORTHO05D007123 3.7e-09 65.5 49 63.3
Mapoly0027s0004 Marchantia polymorpha HOM05D005748 ORTHO05D007123 3.7e-09 65.5 37 78.4
HPP92_001301 Vanilla planifolia HOM05D005748 ORTHO05D007123 6.3e-09 64.7 54 59.3
FAN16G0658 Fragaria x ananassa HOM05D005748 ORTHO05D007123 1.4e-08 63.5 37 73.0
Manes.13G027200 Manihot esculenta HOM05D005748 ORTHO05D007123 1.4e-08 63.5 37 73.0
MCO11G191 Micromonas commoda HOM05D005748 ORTHO05D007123 1.8e-08 63.2 64 51.6
Zm00001eb426240 Zea mays HOM05D005748 ORTHO05D007123 1.8e-08 63.2 39 69.2
CDE06G1755 Ceratophyllum demersum HOM05D005748 ORTHO05D007123 3.1e-08 62.4 40 70.0
AL1G37160 Arabidopsis lyrata HOM05D005748 ORTHO05D007123 4.1e-08 62.0 49 59.2
vmacro01149 Vaccinium macrocarpon HOM05D005748 ORTHO05D007123 4.1e-08 62.0 62 53.2
Phvul.002G063800 Phaseolus vulgaris HOM05D005748 ORTHO05D007123 9.1e-08 60.8 61 54.1
CBR_g41196 Chara braunii HOM05D002427 ORTHO05D002818 3.4e-07 58.9 38 65.8
FAN07G1722 Fragaria x ananassa HOM05D005748 ORTHO05D007123 5.9e-07 58.2 42 61.9
Cre02.g084300 Chlamydomonas reinhardtii HOM05D005748 ORTHO05D007123 1.7e-06 56.6 43 60.5


User provided reference genes

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