Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28424 Sequoiadendron giganteum HOM05D004399 ORTHO05D005303 7.4e-77 290.4 142 100.0
SEGI_29941 Sequoiadendron giganteum HOM05D004399 ORTHO05D005303 8.3e-20 100.9 51 100.0
MBI14_g37191_MAGBIO Magnolia biondii HOM05D004399 ORTHO05D005303 1.2e-13 80.5 51 76.5
SalBow2G2941 Salvia bowleyana HOM05D004399 ORTHO05D005303 1.2e-13 80.5 84 56.0
vmacro10433 Vaccinium macrocarpon HOM05D004399 ORTHO05D005303 1.2e-13 80.5 51 76.5
Rhsim09G0126300 Rhododendron simsii HOM05D004399 ORTHO05D005303 1.5e-13 80.1 51 76.5
CANSAT64G2641 Cannabis sativa HOM05D004399 ORTHO05D005303 2.0e-13 79.7 51 74.5
Atru.chr11.1611 Acer truncatum HOM05D004399 ORTHO05D005303 2.6e-13 79.3 50 76.0
CSS0044473 Camellia sinensis var. sinensis HOM05D004399 ORTHO05D005303 2.6e-13 79.3 51 74.5
CiPaw.05G124200 Carya illinoinensis HOM05D004399 ORTHO05D005303 2.6e-13 79.3 51 74.5
DCAR_024127 Daucus carota HOM05D004399 ORTHO05D005303 2.6e-13 79.3 51 74.5
Nitab4.5_0000231g0090 Nicotiana tabacum HOM05D004399 ORTHO05D005303 2.6e-13 79.3 58 67.2
Cfa008867 Carpinus fangiana HOM05D004399 ORTHO05D005303 3.4e-13 79.0 50 76.0
Haze_11894 Corylus avellana HOM05D004399 ORTHO05D005303 3.4e-13 79.0 50 76.0
ATR1120G192 Amborella trichopoda HOM05D004399 ORTHO05D005303 4.4e-13 78.6 51 74.5
Dinv34060 Davidia involucrata HOM05D004399 ORTHO05D005303 4.4e-13 78.6 51 72.5
Oeu031535.3 Olea europaea HOM05D004399 ORTHO05D005303 4.4e-13 78.6 61 62.3
Solyc05g012150.4 Solanum lycopersicum HOM05D004399 ORTHO05D005303 4.4e-13 78.6 51 74.5
Sopen05g006940 Solanum pennellii HOM05D004399 ORTHO05D005303 4.4e-13 78.6 51 74.5
SGA_v2.0_scaffold16G07803 Striga asiatica HOM05D004399 ORTHO05D005303 4.4e-13 78.6 51 72.5
Ah.03g138840 Amaranthus hybridus HOM05D004399 ORTHO05D005303 5.7e-13 78.2 51 72.5
AUR62007904 Chenopodium quinoa HOM05D004399 ORTHO05D005303 5.7e-13 78.2 51 72.5
SalBow4G1426 Salvia bowleyana HOM05D000195 ORTHO05D000377 5.7e-13 78.2 51 74.5
PGSC0003DMG402028313 Solanum tuberosum HOM05D004399 ORTHO05D005303 5.7e-13 78.2 58 69.0
Thecc.02G328800 Theobroma cacao HOM05D004399 ORTHO05D005303 5.7e-13 78.2 50 76.0
TWI75G0511 Tripterygium wilfordii HOM05D004399 ORTHO05D005303 5.7e-13 78.2 51 72.5
TAR622G1336 Trochodendron aralioides HOM05D004399 ORTHO05D005303 5.7e-13 78.2 51 72.5
MSTRG.7738 Avicennia marina HOM05D004399 ORTHO05D005303 7.5e-13 77.8 51 72.5
PSO832G2862 Papaver somniferum HOM05D004399 ORTHO05D005303 7.5e-13 77.8 51 72.5
QL03p073920 Quercus lobata HOM05D004399 ORTHO05D005303 7.5e-13 77.8 50 74.0
Sc11g0002530 Simmondsia chinensis HOM05D004399 ORTHO05D005303 7.5e-13 77.8 51 74.5
Migut.L01179 Erythranthe guttata HOM05D004399 ORTHO05D005303 9.8e-13 77.4 51 72.5
Lj6A777T47 Lonicera japonica HOM05D004399 ORTHO05D005303 9.8e-13 77.4 51 72.5
Potri.010G157500 Populus trichocarpa HOM05D004399 ORTHO05D005303 9.8e-13 77.4 51 70.6
CANSAT11G0637 Cannabis sativa HOM05D004399 ORTHO05D005303 1.3e-12 77.0 51 72.5
Duzib251G0565 Durio zibethinus HOM05D004399 ORTHO05D005303 1.3e-12 77.0 50 74.0
ECA233G2368 Erigeron canadensis HOM05D004399 ORTHO05D005303 1.3e-12 77.0 51 70.6
Eucgr.B03145 Eucalyptus grandis HOM05D004399 ORTHO05D005303 1.3e-12 77.0 50 74.0
Nitab4.5_0007061g0010 Nicotiana tabacum HOM05D004399 ORTHO05D005303 1.3e-12 77.0 51 72.5
PSO478G0010 Papaver somniferum HOM05D004399 ORTHO05D005303 1.3e-12 77.0 51 72.5
GSVIVG01000552001 Vitis vinifera HOM05D004399 ORTHO05D005303 1.3e-12 77.0 51 70.6
BcaC06g31162 Brassica carinata HOM05D004399 ORTHO05D005303 1.7e-12 76.6 50 74.0
BcaC06g31172 Brassica carinata HOM05D004399 ORTHO05D005303 1.7e-12 76.6 50 74.0
A06p42990 Brassica napus HOM05D004399 ORTHO05D005303 1.7e-12 76.6 50 74.0
C07p34040 Brassica napus HOM05D004399 ORTHO05D005303 1.7e-12 76.6 50 74.0
BolC7t43918H Brassica oleracea HOM05D004399 ORTHO05D005303 1.7e-12 76.6 50 74.0
CDE02G0376 Ceratophyllum demersum HOM05D004399 ORTHO05D005303 1.7e-12 76.6 51 72.5
AUR62003087 Chenopodium quinoa HOM05D004399 ORTHO05D005303 1.7e-12 76.6 51 70.6
HanXRQChr12g0363151 Helianthus annuus HOM05D004399 ORTHO05D005303 1.7e-12 76.6 51 70.6
Hma1.2p1_0566F.1_g179870 Hydrangea macrophylla HOM05D004399 ORTHO05D005303 1.7e-12 76.6 51 68.6
vmacro20929 Vaccinium macrocarpon HOM05D004399 ORTHO05D005303 1.7e-12 76.6 51 74.5
CAN.G707.11 Capsicum annuum HOM05D004399 ORTHO05D005303 2.2e-12 76.3 51 70.6
CDE04G3031 Ceratophyllum demersum HOM05D004399 ORTHO05D005303 2.2e-12 76.3 51 72.5
AUR62019674 Chenopodium quinoa HOM05D004399 ORTHO05D005303 2.2e-12 76.3 50 72.0
Ciclev10032681m.g Citrus clementina HOM05D004399 ORTHO05D005303 2.2e-12 76.3 51 70.6
Lj3C1029T7 Lonicera japonica HOM05D004399 ORTHO05D005303 2.2e-12 76.3 50 72.0
Manes.05G109300 Manihot esculenta HOM05D004399 ORTHO05D005303 2.2e-12 76.3 50 72.0
Nn3g17119 Nelumbo nucifera HOM05D004399 ORTHO05D005303 2.2e-12 76.3 64 57.8
Peaxi162Scf00175g00428 Petunia axillaris HOM05D004399 ORTHO05D005303 2.2e-12 76.3 51 70.6
AT2G03690 Arabidopsis thaliana HOM05D004399 ORTHO05D005303 2.8e-12 75.9 50 72.0
MELO3C011412.2 Cucumis melo HOM05D004399 ORTHO05D005303 2.8e-12 75.9 50 72.0
Gohir.A03G104700 Gossypium hirsutum HOM05D004399 ORTHO05D005303 2.8e-12 75.9 50 72.0
Prupe.1G288800 Prunus persica HOM05D004399 ORTHO05D005303 2.8e-12 75.9 50 72.0
Sabra08G0073300 Salix brachista HOM05D004399 ORTHO05D005303 2.8e-12 75.9 50 72.0
Hund05832 Selenicereus undatus HOM05D004399 ORTHO05D005303 2.8e-12 75.9 51 70.6
BcaB07g30287 Brassica carinata HOM05D004399 ORTHO05D005303 3.7e-12 75.5 50 72.0
A02p33520 Brassica napus HOM05D004399 ORTHO05D005303 3.7e-12 75.5 50 72.0
Thhalv10004874m.g Eutrema salsugineum HOM05D004399 ORTHO05D005303 3.7e-12 75.5 50 72.0
MD16G1059800 Malus domestica HOM05D004399 ORTHO05D005303 3.7e-12 75.5 50 72.0
PSO017G5651 Papaver somniferum HOM05D004399 ORTHO05D005303 3.7e-12 75.5 51 70.6
RcHm_v2.0_Chr4g0438081 Rosa chinensis HOM05D004399 ORTHO05D005303 3.7e-12 75.5 51 70.6
RcHm_v2.0_Chr7g0182561 Rosa chinensis HOM05D004399 ORTHO05D005303 3.7e-12 75.5 56 67.9
Sp2g14510 Schrenkiella parvula HOM05D004399 ORTHO05D005303 3.7e-12 75.5 50 72.0
AL5G13460 Arabidopsis lyrata HOM05D004399 ORTHO05D005303 4.9e-12 75.1 50 70.0
AL5G13480 Arabidopsis lyrata HOM05D004399 ORTHO05D005303 4.9e-12 75.1 50 70.0
Carub.0005s0281 Capsella rubella HOM05D004399 ORTHO05D005303 4.9e-12 75.1 50 70.0
HanXRQChr08g0211681 Helianthus annuus HOM05D004399 ORTHO05D005303 4.9e-12 75.1 51 68.6
Nn4g24779 Nelumbo nucifera HOM05D004399 ORTHO05D005303 4.9e-12 75.1 64 57.8
SalBow4G1206 Salvia bowleyana HOM05D004399 ORTHO05D005303 4.9e-12 75.1 51 72.5
SMO196G0238 Selaginella moellendorffii HOM05D004399 ORTHO05D005303 4.9e-12 75.1 50 72.0
ClCG08G010510 Citrullus lanatus HOM05D004399 ORTHO05D005303 6.3e-12 74.7 50 70.0
CsaV3_6G033760 Cucumis sativus L. HOM05D004399 ORTHO05D005303 6.3e-12 74.7 50 70.0
Lalb_Chr17g0341271 Lupinus albus HOM05D004399 ORTHO05D005303 6.3e-12 74.7 51 70.6
MD13G1060600 Malus domestica HOM05D004399 ORTHO05D005303 6.3e-12 74.7 50 72.0
MD13G1061300 Malus domestica HOM05D004399 ORTHO05D005303 6.3e-12 74.7 50 72.0
Os04g0674200 Oryza sativa ssp. japonica HOM05D004399 ORTHO05D005303 6.3e-12 74.7 58 67.2
Ah.02g126810 Amaranthus hybridus HOM05D004399 ORTHO05D005303 8.3e-12 74.3 50 70.0
Cpa.g.sc1.139 Carica papaya HOM05D004399 ORTHO05D005303 8.3e-12 74.3 50 70.0
Zm00001eb433530 Zea mays HOM05D004399 ORTHO05D005303 8.3e-12 74.3 51 70.6
Aqoxy3G03260 Aquilegia oxysepala HOM05D004399 ORTHO05D005303 1.1e-11 73.9 51 68.6
CARHR146010 Cardamine hirsuta HOM05D004399 ORTHO05D005303 1.1e-11 73.9 50 70.0
COL.COLO4_27864 Corchorus olitorius HOM05D004399 ORTHO05D005303 1.1e-11 73.9 50 72.0
FAN22G0874 Fragaria x ananassa HOM05D004399 ORTHO05D005303 1.1e-11 73.9 50 72.0
Glyma.16G032800 Glycine max HOM05D004399 ORTHO05D005303 1.1e-11 73.9 50 72.0
Psat3g063920 Pisum sativum HOM05D004399 ORTHO05D005303 1.1e-11 73.9 50 72.0
EL10Ac6g15013 Beta vulgaris HOM05D004399 ORTHO05D005303 1.4e-11 73.6 50 70.0
Cc06_g15640 Coffea canephora HOM05D004399 ORTHO05D005303 1.4e-11 73.6 51 68.6
Lsat_1_v5_gn_8_46460 Lactuca sativa HOM05D004399 ORTHO05D005303 1.4e-11 73.6 51 68.6
Potri.008G097100 Populus trichocarpa HOM05D004399 ORTHO05D005303 1.4e-11 73.6 50 68.0
PGR083G0959 Punica granatum HOM05D004399 ORTHO05D005303 1.4e-11 73.6 50 70.0
Sed0000590 Sechium edule HOM05D004399 ORTHO05D005303 1.8e-11 73.2 50 68.0
Aa31LG2G6990 Aethionema arabicum HOM05D004399 ORTHO05D005303 2.4e-11 72.8 50 68.0
arahy.Tifrunner.gnm1.ann1.E76E6E Arachis hypogaea HOM05D004399 ORTHO05D005303 2.4e-11 72.8 50 68.0
arahy.Tifrunner.gnm1.ann1.MJW4NY Arachis hypogaea HOM05D004399 ORTHO05D005303 2.4e-11 72.8 50 68.0
Ca_08608_v3 Cicer arietinum L. HOM05D004399 ORTHO05D005303 2.4e-11 72.8 50 70.0
Ca_25695_v3 Cicer arietinum L. HOM05D004399 ORTHO05D005303 2.4e-11 72.8 50 70.0
Glyma.07G066700 Glycine max HOM05D004399 ORTHO05D005303 2.4e-11 72.8 50 70.0
Medtr4g094990 Medicago truncatula HOM05D004399 ORTHO05D005303 2.4e-11 72.8 50 70.0
Phvul.010G102900 Phaseolus vulgaris HOM05D004399 ORTHO05D005303 2.4e-11 72.8 50 70.0
THA.LOC104805201 Tarenaya hassleriana HOM05D004399 ORTHO05D005303 2.4e-11 72.8 50 70.0
TPR.G29232 Trifolium pratense HOM05D004399 ORTHO05D005303 2.4e-11 72.8 50 70.0
TPR.G35682 Trifolium pratense HOM05D004399 ORTHO05D005303 2.4e-11 72.8 50 70.0
DCAR_026680 Daucus carota HOM05D004399 ORTHO05D005303 3.1e-11 72.4 65 58.5
Medtr7g095060 Medicago truncatula HOM05D004399 ORTHO05D005303 3.1e-11 72.4 50 70.0
AagrBONN_evm.TU.Sc2ySwM_368.1886 Anthoceros agrestis HOM05D004399 ORTHO05D005303 4.1e-11 72.0 50 68.0
BcaC03g17230 Brassica carinata HOM05D004399 ORTHO05D005303 4.1e-11 72.0 50 70.0
BolC2t11249H Brassica oleracea HOM05D004399 ORTHO05D005303 4.1e-11 72.0 50 70.0
FvH4_4g29830 Fragaria vesca HOM05D004399 ORTHO05D005303 4.1e-11 72.0 50 70.0
FAN12G0059 Fragaria x ananassa HOM05D004399 ORTHO05D005303 4.1e-11 72.0 50 70.0
Lj1g0019699 Lotus japonicus HOM05D004399 ORTHO05D005303 4.1e-11 72.0 50 70.0
Sed0002833 Sechium edule HOM05D004399 ORTHO05D005303 5.4e-11 71.6 50 68.0
Aqoxy4G03091 Aquilegia oxysepala HOM05D004399 ORTHO05D005303 7.0e-11 71.2 51 66.7
Os05g0188800 Oryza sativa ssp. japonica HOM05D004399 ORTHO05D005303 7.0e-11 71.2 58 63.8
Mapoly0124s0026 Marchantia polymorpha HOM05D004399 ORTHO05D005303 9.2e-11 70.9 50 68.0
VMungo0331G0538 Vigna mungo HOM05D004399 ORTHO05D005303 9.2e-11 70.9 50 68.0
C02p51640 Brassica napus HOM05D004399 ORTHO05D005303 1.2e-10 70.5 50 70.0
FAN17G2847 Fragaria x ananassa HOM05D004399 ORTHO05D005303 1.6e-10 70.1 50 68.0
Medtr4g094998 Medicago truncatula HOM05D004399 ORTHO05D005303 2.0e-10 69.7 50 68.0
Gohir.D02G129900 Gossypium hirsutum HOM05D004399 ORTHO05D005303 3.5e-10 68.9 47 72.3
Gorai.005G145900 Gossypium raimondii HOM05D004399 ORTHO05D005303 3.5e-10 68.9 47 72.3
Pp3c2_220 Physcomitrium patens HOM05D004399 ORTHO05D005303 7.8e-10 67.8 50 64.0
Phvul.007G165450 Phaseolus vulgaris HOM05D004399 ORTHO05D005303 2.3e-09 66.2 49 69.4
SEGI_18091 Sequoiadendron giganteum HOM05D010149 ORTHO05D001565 6.6e-09 64.7 42 57.1
HanXRQChr13g0414251 Helianthus annuus HOM05D004399 ORTHO05D005303 8.6e-09 64.3 50 62.0
Glyma.07G066400 Glycine max HOM05D004399 ORTHO05D005303 3.3e-08 62.4 43 67.4
CBR_g38753 Chara braunii HOM05D004399 ORTHO05D001303 5.6e-08 61.6 50 56.0
SEGI_02782 Sequoiadendron giganteum HOM05D000997 ORTHO05D000828 3.6e-07 58.9 43 53.5
PRCOL_00001738 Prasinoderma coloniale HOM05D004399 ORTHO05D005303 4.7e-07 58.5 48 60.4
SEGI_03544 Sequoiadendron giganteum HOM05D010149 ORTHO05D013351 5.2e-06 55.1 43 46.5


User provided reference genes

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