Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28419 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 9.8e-40 166.4 87 100.0
SEGI_06703 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 7.3e-27 123.6 86 72.1
SEGI_41081 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.1e-26 122.1 86 70.9
RcHm_v2.0_Chr4g0438461 Rosa chinensis HOM05D001391 ORTHO05D005432 1.8e-25 119.0 86 67.4
Hund25180 Selenicereus undatus HOM05D001391 ORTHO05D005432 1.8e-25 119.0 86 68.6
SEGI_37700 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.3e-25 118.6 86 68.6
ATR0064G010 Amborella trichopoda HOM05D001391 ORTHO05D005432 5.2e-25 117.5 86 66.3
Zm00001eb020150 Zea mays HOM05D001391 ORTHO05D005432 5.2e-25 117.5 86 61.6
MBI16_g24179_MAGBIO Magnolia biondii HOM05D001391 ORTHO05D005432 6.8e-25 117.1 86 65.1
Zm00001eb393170 Zea mays HOM05D001391 ORTHO05D005432 6.8e-25 117.1 86 61.6
Duzib248G0196 Durio zibethinus HOM05D001391 ORTHO05D005432 1.2e-24 116.3 86 67.4
Nn3g17437 Nelumbo nucifera HOM05D001391 ORTHO05D005432 1.5e-24 115.9 86 64.0
Thecc.02G331500 Theobroma cacao HOM05D001391 ORTHO05D005432 1.5e-24 115.9 86 66.3
Manes.01G028100 Manihot esculenta HOM05D001391 ORTHO05D005432 2.0e-24 115.5 86 67.4
CANSAT64G0915 Cannabis sativa HOM05D001391 ORTHO05D005432 2.6e-24 115.2 86 65.1
Sed0003297 Sechium edule HOM05D001391 ORTHO05D005432 2.6e-24 115.2 86 66.3
Sed0027135 Sechium edule HOM05D001391 ORTHO05D005432 2.6e-24 115.2 86 65.1
FvH4_4g30104 Fragaria vesca HOM05D001391 ORTHO05D005432 3.4e-24 114.8 86 66.3
FAN07G1596 Fragaria x ananassa HOM05D001391 ORTHO05D005432 3.4e-24 114.8 86 66.3
RcHm_v2.0_Chr4g0438441 Rosa chinensis HOM05D001391 ORTHO05D005432 3.4e-24 114.8 86 66.3
GSVIVG01012214001 Vitis vinifera HOM05D001391 ORTHO05D005432 3.4e-24 114.8 86 64.0
FAN17G2247 Fragaria x ananassa HOM05D001391 ORTHO05D002605 5.8e-24 114.0 86 66.3
Pp3c2_37740 Physcomitrium patens HOM05D001391 ORTHO05D005432 5.8e-24 114.0 86 64.0
Potri.010G158700 Populus trichocarpa HOM05D001391 ORTHO05D005432 5.8e-24 114.0 86 66.3
QL03p072323 Quercus lobata HOM05D001391 ORTHO05D005432 5.8e-24 114.0 86 62.8
Hund05837 Selenicereus undatus HOM05D001391 ORTHO05D005432 5.8e-24 114.0 86 66.3
Ca_18800_v3 Cicer arietinum L. HOM05D001391 ORTHO05D005432 7.5e-24 113.6 86 61.6
SMO364G0146 Selaginella moellendorffii HOM05D001391 ORTHO05D005432 7.5e-24 113.6 86 62.8
TPR.G34031 Trifolium pratense HOM05D001391 ORTHO05D005432 7.5e-24 113.6 86 61.6
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea HOM05D001391 ORTHO05D005432 9.9e-24 113.2 86 62.8
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea HOM05D001391 ORTHO05D005432 9.9e-24 113.2 86 62.8
Cpa.g.sc1.121 Carica papaya HOM05D001391 ORTHO05D005432 9.9e-24 113.2 83 68.7
CiPaw.06G092300 Carya illinoinensis HOM05D001391 ORTHO05D005432 9.9e-24 113.2 86 64.0
MELO3C011425.2 Cucumis melo HOM05D001391 ORTHO05D005432 9.9e-24 113.2 86 64.0
CsaV3_6G032550 Cucumis sativus L. HOM05D001391 ORTHO05D005432 9.9e-24 113.2 86 64.0
QL03p071791 Quercus lobata HOM05D001391 ORTHO05D005432 9.9e-24 113.2 86 62.8
QL03p071961 Quercus lobata HOM05D001391 ORTHO05D005432 9.9e-24 113.2 86 62.8
QL03p072246 Quercus lobata HOM05D001391 ORTHO05D005432 9.9e-24 113.2 86 62.8
QL06p022506 Quercus lobata HOM05D001391 ORTHO05D005432 9.9e-24 113.2 86 62.8
Sabra10G0120500 Salix brachista HOM05D001391 ORTHO05D005432 9.9e-24 113.2 86 65.1
SGA_v2.0_scaffold16G07780 Striga asiatica HOM05D001391 ORTHO05D005432 9.9e-24 113.2 86 65.1
MD16G1061600 Malus domestica HOM05D001391 ORTHO05D005432 1.3e-23 112.8 86 65.1
TAR629G1471 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.3e-23 112.8 86 61.6
TAR629G2660 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.3e-23 112.8 86 61.6
Lalb_Chr05g0219941 Lupinus albus HOM05D001391 ORTHO05D005432 1.7e-23 112.5 86 62.8
Oeu048144.1 Olea europaea HOM05D001391 ORTHO05D005432 2.2e-23 112.1 86 64.0
QL03p071836 Quercus lobata HOM05D001391 ORTHO05D005432 2.2e-23 112.1 86 61.6
QL03p071994 Quercus lobata HOM05D001391 ORTHO05D005432 2.2e-23 112.1 86 61.6
QL03p072348 Quercus lobata HOM05D001391 ORTHO05D005432 2.2e-23 112.1 86 61.6
HanXRQChr12g0375271 Helianthus annuus HOM05D001391 ORTHO05D005432 2.9e-23 111.7 86 60.5
CSS0007431 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 3.7e-23 111.3 86 64.0
CSS0028231 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 3.7e-23 111.3 86 64.0
Prupe.1G286500 Prunus persica HOM05D001391 ORTHO05D005432 3.7e-23 111.3 86 65.1
TWI31G1273 Tripterygium wilfordii HOM05D001391 ORTHO05D005432 3.7e-23 111.3 86 61.6
Medtr4g083100 Medicago truncatula HOM05D001391 ORTHO05D005432 4.9e-23 110.9 86 61.6
Psat7g134560 Pisum sativum HOM05D001391 ORTHO05D005432 4.9e-23 110.9 86 60.5
PGR102G1705 Punica granatum HOM05D001391 ORTHO05D005432 4.9e-23 110.9 86 64.0
Solyc05g012340.4 Solanum lycopersicum HOM05D001391 ORTHO05D005432 4.9e-23 110.9 86 62.8
Sopen05g007170 Solanum pennellii HOM05D001391 ORTHO05D005432 4.9e-23 110.9 86 62.8
AUR62003104 Chenopodium quinoa HOM05D001391 ORTHO05D005432 6.4e-23 110.5 86 64.0
AUR62007921 Chenopodium quinoa HOM05D001391 ORTHO05D005432 6.4e-23 110.5 86 64.0
Glyma.07G225600 Glycine max HOM05D001391 ORTHO05D005432 6.4e-23 110.5 83 63.9
Glyma.20G025600 Glycine max HOM05D001391 ORTHO05D005432 6.4e-23 110.5 83 63.9
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis HOM05D001391 ORTHO05D005432 8.3e-23 110.2 86 64.0
ECA246G4329 Erigeron canadensis HOM05D001391 ORTHO05D005432 8.3e-23 110.2 86 61.6
Eucgr.B03154 Eucalyptus grandis HOM05D001391 ORTHO05D005432 8.3e-23 110.2 86 61.6
Gorai.008G177300 Gossypium raimondii HOM05D001391 ORTHO05D005432 8.3e-23 110.2 86 64.0
MD13G1063100 Malus domestica HOM05D001391 ORTHO05D005432 8.3e-23 110.2 86 62.8
Sabra08G0071900 Salix brachista HOM05D001391 ORTHO05D005432 8.3e-23 110.2 86 65.1
THA.LOC104805193 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 8.3e-23 110.2 86 61.6
Ciclev10031905m.g Citrus clementina HOM05D001391 ORTHO05D005432 1.1e-22 109.8 86 59.3
Pp3c1_8060 Physcomitrium patens HOM05D001391 ORTHO05D005432 1.1e-22 109.8 86 60.5
Aqoxy3G03632 Aquilegia oxysepala HOM05D001391 ORTHO05D005432 1.4e-22 109.4 86 62.8
Nn4g23419 Nelumbo nucifera HOM05D001391 ORTHO05D005432 1.4e-22 109.4 86 62.8
Rhsim12G0074900 Rhododendron simsii HOM05D001391 ORTHO05D005432 1.4e-22 109.4 86 61.6
THA.LOC104824058 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 1.4e-22 109.4 83 62.7
EL10Ac6g14993 Beta vulgaris HOM05D001391 ORTHO05D005432 1.9e-22 109.0 86 62.8
Dinv34072 Davidia involucrata HOM05D001391 ORTHO05D005432 1.9e-22 109.0 83 65.1
Lj3C1030G23 Lonicera japonica HOM05D001391 ORTHO05D005432 1.9e-22 109.0 86 60.5
Actinidia16169 Actinidia chinensis HOM05D001391 ORTHO05D005432 2.4e-22 108.6 86 60.5
Gohir.D12G164650 Gossypium hirsutum HOM05D001391 ORTHO05D005432 2.4e-22 108.6 86 64.0
HanXRQChr15g0477081 Helianthus annuus HOM05D001391 ORTHO05D005432 2.4e-22 108.6 86 59.3
Lj6C779T14 Lonicera japonica HOM05D001391 ORTHO05D005432 2.4e-22 108.6 86 61.6
COL.COLO4_27891 Corchorus olitorius HOM05D001391 ORTHO05D005432 3.2e-22 108.2 86 62.8
vmacro01316 Vaccinium macrocarpon HOM05D001391 ORTHO05D005432 3.2e-22 108.2 86 61.6
Atru.chr11.1633 Acer truncatum HOM05D001391 ORTHO05D005432 7.1e-22 107.1 86 62.8
Migut.L01194 Erythranthe guttata HOM05D001391 ORTHO05D005432 7.1e-22 107.1 86 60.5
QL03p071709 Quercus lobata HOM05D001391 ORTHO05D005432 7.1e-22 107.1 86 60.5
Ah.02g126880 Amaranthus hybridus HOM05D001391 ORTHO05D005432 9.2e-22 106.7 86 61.6
Cc11_g12040 Coffea canephora HOM05D001391 ORTHO05D005432 9.2e-22 106.7 83 62.7
PSO017G5650 Papaver somniferum HOM05D001391 ORTHO05D005432 9.2e-22 106.7 86 61.6
PSO478G1327 Papaver somniferum HOM05D001391 ORTHO05D005432 9.2e-22 106.7 86 61.6
DCAR_007192 Daucus carota HOM05D001391 ORTHO05D005432 1.6e-21 105.9 86 60.5
Lsat_1_v5_gn_3_53800 Lactuca sativa HOM05D001391 ORTHO05D005432 1.6e-21 105.9 86 58.1
CDE05G0079 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 2.1e-21 105.5 86 59.3
HPP92_020445 Vanilla planifolia HOM05D001391 ORTHO05D005432 3.5e-21 104.8 86 61.6
Lj4g0006249 Lotus japonicus HOM05D001391 ORTHO05D005432 6.0e-21 104.0 83 57.8
A09p24460 Brassica napus HOM05D001391 ORTHO05D005432 1.0e-20 103.2 86 58.1
BcaB07g30667 Brassica carinata HOM05D001391 ORTHO05D005432 1.3e-20 102.8 86 58.1
BcaC04g21485 Brassica carinata HOM05D001391 ORTHO05D005432 1.3e-20 102.8 86 58.1
C09p31260 Brassica napus HOM05D001391 ORTHO05D005432 1.3e-20 102.8 86 58.1
BolC9t55982H Brassica oleracea HOM05D001391 ORTHO05D005432 1.3e-20 102.8 86 58.1
BraA09t38039Z Brassica rapa HOM05D001391 ORTHO05D005432 1.3e-20 102.8 86 58.1
AL5G13280 Arabidopsis lyrata HOM05D001391 ORTHO05D005432 1.7e-20 102.4 86 58.1
unitig_22.g6493 Utricularia gibba HOM05D001391 ORTHO05D005432 1.7e-20 102.4 86 57.0
BcaC03g17224 Brassica carinata HOM05D001391 ORTHO05D005432 3.0e-20 101.7 86 57.0
C02p51560 Brassica napus HOM05D001391 ORTHO05D005432 3.0e-20 101.7 86 57.0
BolC2t11243H Brassica oleracea HOM05D001391 ORTHO05D005432 3.0e-20 101.7 86 57.0
Aa31LG2G7090 Aethionema arabicum HOM05D001391 ORTHO05D005432 3.9e-20 101.3 86 58.1
AT2G03510 Arabidopsis thaliana HOM05D001391 ORTHO05D005432 3.9e-20 101.3 86 57.0
Thhalv10004477m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 3.9e-20 101.3 86 57.0
HanXRQChr08g0223901 Helianthus annuus HOM05D001391 ORTHO05D005432 3.9e-20 101.3 86 55.8
Sp2g14420 Schrenkiella parvula HOM05D001391 ORTHO05D005432 6.6e-20 100.5 86 55.8
CSS0036366 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 8.6e-20 100.1 85 56.5
Carub.0005s0265 Capsella rubella HOM05D001391 ORTHO05D005432 8.6e-20 100.1 86 55.8
CARHR145860 Cardamine hirsuta HOM05D001391 ORTHO05D005432 8.6e-20 100.1 86 55.8
CBR_g22084 Chara braunii HOM05D001391 ORTHO05D005432 1.5e-19 99.4 86 57.0
Gorai.013G093700 Gossypium raimondii HOM05D001391 ORTHO05D005432 2.5e-19 98.6 82 61.0
Hma1.2p1_1826F.1_g304410 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 2.5e-19 98.6 83 59.0
Gohir.D13G081800 Gossypium hirsutum HOM05D001391 ORTHO05D005432 9.5e-19 96.7 82 61.0
CsaV3_6G033630 Cucumis sativus L. HOM05D001391 ORTHO05D005432 2.1e-18 95.5 78 61.5
FAN22G1389 Fragaria x ananassa HOM05D001391 ORTHO05D005432 2.1e-18 95.5 73 65.8
VMungo0251G0716 Vigna mungo HOM05D001391 ORTHO05D005432 3.6e-18 94.7 109 48.6
Haze_11913 Corylus avellana HOM05D001391 ORTHO05D005432 1.8e-17 92.4 73 63.0
CAN.G616.39 Capsicum annuum HOM05D001391 ORTHO05D005432 4.0e-17 91.3 86 54.7
PGSC0003DMG400028375 Solanum tuberosum HOM05D001391 ORTHO05D005432 8.9e-17 90.1 72 61.1
PSO478G2440 Papaver somniferum HOM05D001391 ORTHO05D005432 2.0e-16 89.0 73 61.6
QL03p071737 Quercus lobata HOM05D001391 ORTHO05D005432 2.0e-16 89.0 73 61.6
TAR622G0883 Trochodendron aralioides HOM05D001391 ORTHO05D005432 2.6e-16 88.6 110 45.5
Mapoly0041s0056 Marchantia polymorpha HOM05D001391 ORTHO05D005432 7.6e-16 87.0 86 52.3
Thhalv10022792m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 1.7e-15 85.9 79 50.6
Thhalv10022979m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 1.7e-15 85.9 79 50.6
DCAR_030039 Daucus carota HOM05D001391 ORTHO05D005432 2.9e-15 85.1 72 58.3
Gohir.A13G082366 Gossypium hirsutum HOM05D001391 ORTHO05D005432 7.1e-14 80.5 71 57.7
Hma1.2p1_3404F.1_g335810 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 3.5e-13 78.2 86 50.0
Nitab4.5_0001487g0070 Nicotiana tabacum HOM05D001391 ORTHO05D005432 1.3e-12 76.3 78 53.8
Nitab4.5_0000231g0390 Nicotiana tabacum HOM05D001391 ORTHO05D005432 2.8e-10 68.6 69 55.1


User provided reference genes

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