Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28410 Sequoiadendron giganteum HOM05D024882 ORTHO05D020243 1.1e-53 213.0 102 100.0
SEGI_02726 Sequoiadendron giganteum HOM05D024882 ORTHO05D020243 1.7e-38 162.5 115 73.0
SEGI_30453 Sequoiadendron giganteum HOM05D024882 ORTHO05D020243 4.2e-34 147.9 104 72.1
SEGI_11259 Sequoiadendron giganteum HOM05D002493 ORTHO05D003175 3.4e-15 85.1 102 47.1
SEGI_07578 Sequoiadendron giganteum HOM05D024882 ORTHO05D020243 1.3e-11 73.2 63 61.9
SEGI_20583 Sequoiadendron giganteum HOM05D002493 ORTHO05D003175 8.0e-09 63.9 48 56.2
Sed0023770 Sechium edule HOM05D002493 ORTHO05D003175 3.4e-07 58.5 48 52.1
ATR0307G132 Amborella trichopoda HOM05D002493 ORTHO05D003175 4.4e-07 58.2 43 67.4
ClCG10G016470 Citrullus lanatus HOM05D002493 ORTHO05D003175 5.8e-07 57.8 48 50.0
MELO3C009729.2 Cucumis melo HOM05D002493 ORTHO05D003175 5.8e-07 57.8 48 50.0
CsaV3_3G039870 Cucumis sativus L. HOM05D002493 ORTHO05D003175 5.8e-07 57.8 48 50.0
Manes.08G061400 Manihot esculenta HOM05D002493 ORTHO05D003175 5.8e-07 57.8 49 51.0
Ca_08373_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 7.5e-07 57.4 48 47.9
Ca_20167_v3 Cicer arietinum L. HOM05D004930 ORTHO05D000002 7.5e-07 57.4 58 41.4
Actinidia38179 Actinidia chinensis HOM05D002493 ORTHO05D003175 1.3e-06 56.6 48 50.0
Ca_17097_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 1.3e-06 56.6 48 45.8
Cfa019980 Carpinus fangiana HOM05D002493 ORTHO05D003175 1.7e-06 56.2 48 50.0
CAN.G128.85 Capsicum annuum HOM05D002493 ORTHO05D003175 2.2e-06 55.8 89 34.8
Lj2C403T6 Lonicera japonica HOM05D002493 ORTHO05D003175 2.2e-06 55.8 59 44.1
MD14G1088300 Malus domestica HOM05D002493 ORTHO05D003175 2.2e-06 55.8 49 49.0
SalBow6G2849 Salvia bowleyana HOM05D002493 ORTHO05D003175 2.2e-06 55.8 81 38.3
Sed0019660 Sechium edule HOM05D002493 ORTHO05D003175 2.2e-06 55.8 48 50.0
PGSC0003DMG400028192 Solanum tuberosum HOM05D002493 ORTHO05D003175 2.2e-06 55.8 97 30.9
VMungo0720G0912 Vigna mungo HOM05D002493 ORTHO05D003175 2.2e-06 55.8 49 49.0
CiPaw.10G042500 Carya illinoinensis HOM05D002493 ORTHO05D003175 2.9e-06 55.5 48 47.9
Haze_20255 Corylus avellana HOM05D002493 ORTHO05D003175 2.9e-06 55.5 48 47.9
Glyma.03G124700 Glycine max HOM05D002493 ORTHO05D003175 2.9e-06 55.5 48 50.0
TAR633G1508 Trochodendron aralioides HOM05D002493 ORTHO05D003175 2.9e-06 55.5 65 41.5
TAR636G0768 Trochodendron aralioides HOM05D002493 ORTHO05D003175 2.9e-06 55.5 59 44.1
CANSAT64G2707 Cannabis sativa HOM05D002493 ORTHO05D003175 3.7e-06 55.1 59 42.4
Dinv21482 Davidia involucrata HOM05D002493 ORTHO05D003175 3.7e-06 55.1 48 47.9
Oeu027954.1 Olea europaea HOM05D002493 ORTHO05D003175 3.7e-06 55.1 48 43.8
Actinidia05482 Actinidia chinensis HOM05D002493 ORTHO05D003175 4.9e-06 54.7 48 50.0
CARHR085400 Cardamine hirsuta HOM05D002493 ORTHO05D003175 4.9e-06 54.7 49 42.9
CiPaw.09G049700 Carya illinoinensis HOM05D002493 ORTHO05D003175 4.9e-06 54.7 48 47.9
Ca_12358_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 4.9e-06 54.7 48 47.9
MBI19_g07500_MAGBIO Magnolia biondii HOM05D002493 ORTHO05D003175 4.9e-06 54.7 48 47.9
PSO384G4835 Papaver somniferum HOM05D002493 ORTHO05D003175 4.9e-06 54.7 50 48.0
Potri.006G035500 Populus trichocarpa HOM05D002493 ORTHO05D003175 4.9e-06 54.7 48 47.9
CSS0001541 Camellia sinensis var. sinensis HOM05D002493 ORTHO05D020243 6.4e-06 54.3 45 48.9
CSS0041758 Camellia sinensis var. sinensis HOM05D002493 ORTHO05D020243 6.4e-06 54.3 45 48.9
Manes.09G002800 Manihot esculenta HOM05D002493 ORTHO05D003175 6.4e-06 54.3 49 51.0
Phvul.007G239100 Phaseolus vulgaris HOM05D002493 ORTHO05D003175 6.4e-06 54.3 48 47.9
Prupe.7G028700 Prunus persica HOM05D002493 ORTHO05D003175 6.4e-06 54.3 48 45.8
Ca_22467_v3 Cicer arietinum L. HOM05D000349 ORTHO05D003175 8.3e-06 53.9 48 45.8
QL07p012378 Quercus lobata HOM05D002493 ORTHO05D003175 8.3e-06 53.9 48 45.8
TWI77G0717 Tripterygium wilfordii HOM05D002493 ORTHO05D003175 8.3e-06 53.9 82 31.7
HPP92_025127 Vanilla planifolia HOM05D000001 ORTHO05D000003 8.3e-06 53.9 49 46.9


User provided reference genes

Program Settings