Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 1.8e-161 572.8 341 100.0
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 1.2e-117 427.2 317 64.7
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 1.3e-114 417.2 316 77.8
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 2.1e-114 416.4 320 77.8
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 2.8e-114 416.0 317 74.8
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 4.8e-114 415.2 320 69.7
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 6.2e-114 414.8 317 69.1
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 8.1e-114 414.5 324 75.9
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 8.1e-114 414.5 323 76.5
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 8.1e-114 414.5 320 62.2
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 1.1e-113 414.1 317 77.9
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 1.4e-113 413.7 320 60.9
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.4e-113 413.7 320 77.8
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 2.4e-113 412.9 317 77.0
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 3.1e-113 412.5 320 61.6
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 5.3e-113 411.8 320 75.3
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 5.3e-113 411.8 320 65.0
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 6.9e-113 411.4 321 61.7
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 6.9e-113 411.4 320 60.6
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 9.0e-113 411.0 317 77.9
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 9.0e-113 411.0 317 76.0
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.2e-112 410.6 320 60.3
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 1.2e-112 410.6 320 60.9
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 1.5e-112 410.2 318 62.9
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.0e-112 409.8 321 61.1
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 2.0e-112 409.8 317 61.2
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 2.0e-112 409.8 330 59.7
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 2.0e-112 409.8 317 76.7
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 2.6e-112 409.5 315 62.2
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 3.4e-112 409.1 320 63.1
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 4.4e-112 408.7 317 77.6
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 4.4e-112 408.7 320 76.9
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 5.8e-112 408.3 320 75.6
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 7.6e-112 407.9 317 77.6
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 7.6e-112 407.9 317 74.1
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 7.6e-112 407.9 320 72.8
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 9.9e-112 407.5 317 76.3
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 9.9e-112 407.5 320 60.9
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 1.3e-111 407.1 320 60.0
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 2.2e-111 406.4 320 74.4
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 2.2e-111 406.4 320 60.3
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 2.2e-111 406.4 320 60.3
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 2.2e-111 406.4 320 60.9
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 2.9e-111 406.0 317 76.3
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 3.8e-111 405.6 317 76.3
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 3.8e-111 405.6 320 75.0
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 3.8e-111 405.6 317 76.0
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 4.9e-111 405.2 317 75.7
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 6.4e-111 404.8 315 76.5
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 6.4e-111 404.8 317 75.4
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 6.4e-111 404.8 317 76.3
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 1.4e-110 403.7 315 76.8
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 1.4e-110 403.7 316 63.9
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 1.9e-110 403.3 320 75.3
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 1.9e-110 403.3 317 77.3
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 2.4e-110 402.9 320 75.6
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 4.2e-110 402.1 316 75.0
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 5.4e-110 401.7 315 75.9
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 5.4e-110 401.7 320 60.3
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 1.6e-109 400.2 316 75.6
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 1.6e-109 400.2 313 74.4
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 2.7e-109 399.4 317 74.4
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 3.5e-109 399.1 317 59.6
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 3.5e-109 399.1 317 74.8
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 6.0e-109 398.3 320 70.6
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.0e-108 397.5 317 75.4
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 1.7e-108 396.7 319 74.3
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 3.0e-108 396.0 322 59.6
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 6.6e-108 394.8 360 65.6
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 1.1e-107 394.0 319 73.0
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 1.5e-107 393.7 323 59.4
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 3.3e-107 392.5 320 66.6
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 7.4e-107 391.3 317 68.1
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 1.3e-106 390.6 317 74.8
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 2.1e-106 389.8 320 72.5
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 3.6e-106 389.0 317 74.1
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.6e-106 389.0 317 74.4
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 6.2e-106 388.3 317 74.1
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.4e-105 387.1 320 62.8
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 4.0e-105 385.6 317 72.9
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 9.0e-105 384.4 233 74.7
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 1.5e-104 383.6 320 56.9
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 1.5e-104 383.6 320 57.2
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 1.5e-104 383.6 326 69.9
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 2.6e-104 382.9 319 58.9
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 3.4e-104 382.5 320 56.9
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 5.8e-104 381.7 233 74.7
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 7.6e-104 381.3 320 56.6
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 9.9e-104 380.9 320 56.6
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.1e-102 377.5 317 72.9
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.4e-102 377.1 235 71.1
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 2.1e-101 373.2 233 73.4
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 5.1e-100 368.6 321 71.0
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 1.1e-99 367.5 319 57.1
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 4.3e-99 365.5 317 72.6
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 3.1e-97 359.4 236 68.2
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 7.1e-94 348.2 331 54.1
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.3e-92 344.0 306 69.6
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 6.9e-89 331.6 318 68.2
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 9.0e-81 304.7 256 59.4
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 5.9e-80 302.0 275 73.5
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 1.4e-78 297.4 256 76.2
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 1.9e-78 297.0 256 74.2
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 6.3e-74 282.0 246 58.5
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 1.8e-73 280.4 248 76.2
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 8.5e-71 271.6 369 39.0
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 9.7e-67 258.1 243 72.4
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 1.3e-66 257.7 246 71.1
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 1.8e-60 237.3 326 46.0
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 2.0e-56 223.8 185 56.8
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 6.5e-55 218.8 193 57.0
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 1.2e-53 214.5 223 49.8
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.0e-48 197.2 140 66.4
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 9.5e-46 188.3 123 65.9
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 2.6e-43 180.3 125 64.8
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.2e-37 161.4 96 75.0
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 8.3e-18 95.5 89 58.4
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 2.3e-12 77.4 57 61.4
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 6.6e-07 59.3 61 50.8


User provided reference genes

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