Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28297 Sequoiadendron giganteum HOM05D004846 ORTHO05D005630 1.3e-207 726.1 364 100.0
ATR0751G144 Amborella trichopoda HOM05D004846 ORTHO05D005630 7.9e-99 364.8 368 52.4
MBI15_g38527_MAGBIO Magnolia biondii HOM05D004846 ORTHO05D005630 1.3e-96 357.5 380 50.3
TAR371G0224 Trochodendron aralioides HOM05D004846 ORTHO05D005630 8.4e-93 344.7 381 49.6
CSS0030635 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 9.3e-92 341.3 378 50.5
PSO210G2073 Papaver somniferum HOM05D004846 ORTHO05D005630 5.1e-90 335.5 378 47.9
Mapoly0133s0025 Marchantia polymorpha HOM05D004846 ORTHO05D005630 8.7e-90 334.7 366 49.2
Dinv25698 Davidia involucrata HOM05D004846 ORTHO05D005630 5.7e-89 332.0 373 48.5
GSVIVG01027213001 Vitis vinifera HOM05D004846 ORTHO05D005630 5.7e-89 332.0 377 46.9
PSO210G2938 Papaver somniferum HOM05D004846 ORTHO05D005630 3.7e-88 329.3 378 47.1
CANSAT64G0871 Cannabis sativa HOM05D004846 ORTHO05D005630 8.2e-88 328.2 367 46.6
CAN.G473.55 Capsicum annuum HOM05D004846 ORTHO05D005630 9.3e-84 314.7 373 47.5
Actinidia05946 Actinidia chinensis HOM05D004846 ORTHO05D005630 1.2e-83 314.3 378 47.1
Cfa007283 Carpinus fangiana HOM05D004846 ORTHO05D005630 1.6e-83 313.9 379 45.4
Cc07_g00370 Coffea canephora HOM05D004846 ORTHO05D005630 4.6e-83 312.4 377 46.7
QL02p072992 Quercus lobata HOM05D004846 ORTHO05D005630 6.1e-83 312.0 376 43.9
CiPaw.03G050100 Carya illinoinensis HOM05D004846 ORTHO05D005630 3.0e-82 309.7 377 45.9
Oeu062399.1 Olea europaea HOM05D004846 ORTHO05D005630 2.5e-81 306.6 367 46.0
Sabra16G0218700 Salix brachista HOM05D004846 ORTHO05D005630 3.3e-81 306.2 369 45.8
SGA_v2.0_scaffold66G22277 Striga asiatica HOM05D004846 ORTHO05D005630 9.7e-81 304.7 382 45.5
Manes.15G092600 Manihot esculenta HOM05D004846 ORTHO05D005630 1.6e-80 303.9 380 45.0
Rhsim10G0011500 Rhododendron simsii HOM05D004846 ORTHO05D005630 4.8e-80 302.4 392 46.4
Nitab4.5_0001863g0210 Nicotiana tabacum HOM05D004846 ORTHO05D005630 6.3e-80 302.0 378 45.2
Migut.H00055 Erythranthe guttata HOM05D004846 ORTHO05D005630 6.9e-79 298.5 367 45.0
Hund19592 Selenicereus undatus HOM05D004846 ORTHO05D005630 6.9e-79 298.5 378 45.2
CsaV3_3G046520 Cucumis sativus L. HOM05D004846 ORTHO05D005630 1.2e-78 297.7 364 44.5
ECA233G5463 Erigeron canadensis HOM05D004846 ORTHO05D005630 1.2e-78 297.7 371 43.9
HPP92_021915 Vanilla planifolia HOM05D004846 ORTHO05D005630 1.2e-78 297.7 378 44.2
Potri.001G338000 Populus trichocarpa HOM05D004846 ORTHO05D005630 2.0e-78 297.0 377 45.4
AUR62031596 Chenopodium quinoa HOM05D004846 ORTHO05D005630 5.9e-78 295.4 378 44.4
PGSC0003DMG403020229 Solanum tuberosum HOM05D004846 ORTHO05D005630 5.9e-78 295.4 379 44.1
Sed0008655 Sechium edule HOM05D004846 ORTHO05D005630 2.9e-77 293.1 369 43.4
AUR62012470 Chenopodium quinoa HOM05D004846 ORTHO05D005630 6.5e-77 292.0 377 43.8
Ah.10g035510 Amaranthus hybridus HOM05D004846 ORTHO05D005630 1.9e-76 290.4 370 45.4
HanXRQChr02g0054051 Helianthus annuus HOM05D004846 ORTHO05D005630 3.2e-76 289.7 370 43.0
Lj1g0007607 Lotus japonicus HOM05D004846 ORTHO05D005630 4.2e-76 289.3 379 42.7
Glyma.16G063300 Glycine max HOM05D004846 ORTHO05D005630 2.1e-75 287.0 377 42.4
Glyma.19G082100 Glycine max HOM05D004846 ORTHO05D005630 1.4e-74 284.3 377 41.4
Sopen02g038410 Solanum pennellii HOM05D004846 ORTHO05D005630 2.3e-74 283.5 381 44.1
Medtr7g037280 Medicago truncatula HOM05D004846 ORTHO05D005630 5.1e-74 282.3 376 41.2
Solyc02g093770.3 Solanum lycopersicum HOM05D004846 ORTHO05D005630 6.7e-74 282.0 379 44.1
TWI15G0720 Tripterygium wilfordii HOM05D004846 ORTHO05D005630 1.1e-73 281.2 382 43.5
Lalb_Chr24g0403411 Lupinus albus HOM05D004846 ORTHO05D005630 2.0e-73 280.4 371 42.9
Zm00001eb308720 Zea mays HOM05D004846 ORTHO05D005630 2.0e-73 280.4 375 41.9
Peaxi162Scf00420g00255 Petunia axillaris HOM05D004846 ORTHO05D005630 2.5e-73 280.0 366 44.8
Lsat_1_v5_gn_5_21981 Lactuca sativa HOM05D004846 ORTHO05D005630 4.3e-73 279.3 370 41.9
MD17G1018500 Malus domestica HOM05D004846 ORTHO05D005630 4.3e-73 279.3 369 42.5
Prupe.3G299200 Prunus persica HOM05D004846 ORTHO05D005630 7.4e-73 278.5 372 41.4
Sed0014062 Sechium edule HOM05D004846 ORTHO05D005630 7.4e-73 278.5 367 41.7
Phvul.008G148206 Phaseolus vulgaris HOM05D004846 ORTHO05D005630 1.3e-72 277.7 381 42.0
VMungo1127G0826 Vigna mungo HOM05D004846 ORTHO05D005630 2.2e-72 276.9 382 41.4
Ciclev10014098m.g Citrus clementina HOM05D004846 ORTHO05D005630 2.8e-72 276.6 378 41.3
Pp3c3_36830 Physcomitrium patens HOM05D004846 ORTHO05D005630 1.4e-71 274.2 367 45.8
HanXRQChr07g0193151 Helianthus annuus HOM05D004846 ORTHO05D005630 2.4e-71 273.5 373 42.1
RcHm_v2.0_Chr2g0174121 Rosa chinensis HOM05D004846 ORTHO05D005630 2.4e-71 273.5 377 41.9
Sc09g0010530 Simmondsia chinensis HOM05D004846 ORTHO05D005630 3.1e-71 273.1 376 42.0
MD09G1017700 Malus domestica HOM05D004846 ORTHO05D005630 6.9e-71 271.9 379 41.2
Os09g0266400 Oryza sativa ssp. japonica HOM05D004846 ORTHO05D005630 1.2e-70 271.2 365 40.0
PGR083G2372 Punica granatum HOM05D004846 ORTHO05D005630 1.2e-70 271.2 368 40.5
TPR.G9064 Trifolium pratense HOM05D004846 ORTHO05D005630 1.2e-70 271.2 357 42.6
MSTRG.24063 Avicennia marina HOM05D004846 ORTHO05D005630 5.9e-70 268.9 386 41.7
Atru.chr6.2483 Acer truncatum HOM05D004846 ORTHO05D005630 2.9e-69 266.5 382 41.9
Cpa.g.sc130.45 Carica papaya HOM05D004846 ORTHO05D005630 2.9e-69 266.5 382 40.6
ClCG05G017040 Citrullus lanatus HOM05D004846 ORTHO05D005630 9.4e-68 261.5 435 37.0
MELO3C003688.2 Cucumis melo HOM05D004846 ORTHO05D005630 1.6e-67 260.8 364 40.9
EL10Ac2g04126 Beta vulgaris HOM05D004846 ORTHO05D005630 3.6e-67 259.6 377 41.9
Eucgr.J02281 Eucalyptus grandis HOM05D004846 ORTHO05D005630 1.4e-66 257.7 376 40.4
FAN05G3122 Fragaria x ananassa HOM05D004846 ORTHO05D005630 1.8e-66 257.3 381 40.4
CDE01G0149 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 2.3e-66 256.9 339 43.1
FvH4_6g52480 Fragaria vesca HOM05D004846 ORTHO05D005630 3.9e-66 256.1 377 40.8
FAN14G2722 Fragaria x ananassa HOM05D004846 ORTHO05D005630 5.1e-66 255.8 377 40.8
FAN02G3962 Fragaria x ananassa HOM05D004846 ORTHO05D005630 8.8e-66 255.0 377 40.1
Thecc.04G024900 Theobroma cacao HOM05D004846 ORTHO05D005630 5.7e-65 252.3 372 41.1
arahy.Tifrunner.gnm1.ann1.QFX8QT Arachis hypogaea HOM05D004846 ORTHO05D005630 8.2e-64 248.4 373 38.9
arahy.Tifrunner.gnm1.ann1.EI4BFE Arachis hypogaea HOM05D004846 ORTHO05D005630 1.1e-63 248.1 373 39.1
Gohir.A10G160700 Gossypium hirsutum HOM05D004846 ORTHO05D005630 2.9e-61 240.0 369 39.6
Pp3c12_23520 Physcomitrium patens HOM05D004846 ORTHO05D005630 1.1e-60 238.0 364 40.9
Gohir.D10G085400 Gossypium hirsutum HOM05D004846 ORTHO05D005630 2.5e-60 236.9 363 39.1
Gorai.011G093300 Gossypium raimondii HOM05D004846 ORTHO05D005630 3.2e-60 236.5 363 38.8
FAN09G4064 Fragaria x ananassa HOM05D004846 ORTHO05D005630 2.7e-59 233.4 377 38.7
Pp3c14_5780 Physcomitrium patens HOM05D004846 ORTHO05D005630 6.1e-59 232.3 365 39.5
THA.LOC104805347 Tarenaya hassleriana HOM05D004846 ORTHO05D005630 4.4e-57 226.1 376 37.8
Gohir.D09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 9.7e-57 224.9 336 38.4
Gorai.006G037800 Gossypium raimondii HOM05D004846 ORTHO05D005630 9.7e-57 224.9 360 36.9
Duzib187G0011 Durio zibethinus HOM05D004846 ORTHO05D005630 2.2e-56 223.8 316 40.8
AT3G27325 Arabidopsis thaliana HOM05D004846 ORTHO05D005630 3.7e-56 223.0 366 38.8
Lj3C906G17 Lonicera japonica HOM05D004846 ORTHO05D005630 4.8e-56 222.6 379 38.5
Gohir.A09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 2.4e-55 220.3 366 35.8
AagrBONN_evm.TU.Sc2ySwM_228.569 Anthoceros agrestis HOM05D004846 ORTHO05D005630 3.1e-55 219.9 283 43.1
Thhalv10003555m.g Eutrema salsugineum HOM05D004846 ORTHO05D005630 4.1e-55 219.5 365 38.1
vmacro05920 Vaccinium macrocarpon HOM05D004846 ORTHO05D005630 4.1e-55 219.5 369 39.6
Aa31LG2G5360 Aethionema arabicum HOM05D004846 ORTHO05D005630 5.3e-55 219.2 369 36.6
DCAR_013672 Daucus carota HOM05D004846 ORTHO05D005630 5.3e-55 219.2 367 38.7
Sp2g16490 Schrenkiella parvula HOM05D004846 ORTHO05D005630 9.1e-55 218.4 369 37.9
A06p41290 Brassica napus HOM05D004846 ORTHO05D005630 1.6e-54 217.6 366 37.7
C07p36370 Brassica napus HOM05D004846 ORTHO05D005630 1.6e-54 217.6 366 37.7
BraA06t27054Z Brassica rapa HOM05D004846 ORTHO05D005630 1.6e-54 217.6 366 37.7
BcaC06g33832 Brassica carinata HOM05D004846 ORTHO05D005630 2.0e-54 217.2 366 37.4
AL5G16590 Arabidopsis lyrata HOM05D004846 ORTHO05D005630 3.5e-54 216.5 368 37.5
Carub.0005s0560 Capsella rubella HOM05D004846 ORTHO05D005630 3.5e-54 216.5 371 37.5
BolC7t44153H Brassica oleracea HOM05D004846 ORTHO05D005630 5.9e-54 215.7 366 37.4
BcaC06g31008 Brassica carinata HOM05D004846 ORTHO05D005630 6.5e-53 212.2 361 37.1
SalBow2G2965 Salvia bowleyana HOM05D004846 ORTHO05D005630 1.2e-51 208.0 372 39.5
SGA_v2.0_scaffold135G34938 Striga asiatica HOM05D004846 ORTHO05D005630 4.0e-50 203.0 266 43.6
C02p54070 Brassica napus HOM05D004846 ORTHO05D005630 7.5e-49 198.7 359 35.4
BolC2t11469H Brassica oleracea HOM05D004846 ORTHO05D005630 1.8e-47 194.1 363 35.0
Haze_14810 Corylus avellana HOM05D004846 ORTHO05D005630 2.4e-47 193.7 419 35.8
A02p35330 Brassica napus HOM05D004846 ORTHO05D005630 7.0e-47 192.2 363 35.5
SMO119G0307 Selaginella moellendorffii HOM05D004846 ORTHO05D005630 5.9e-46 189.1 373 33.8
Actinidia36160 Actinidia chinensis HOM05D004846 ORTHO05D005630 7.7e-46 188.7 238 46.6
BraA02t08536Z Brassica rapa HOM05D004846 ORTHO05D005630 2.5e-44 183.7 358 33.8
CARHR040910 Cardamine hirsuta HOM05D004846 ORTHO05D005630 4.7e-43 179.5 360 33.1
COL.COLO4_29272 Corchorus olitorius HOM05D004846 ORTHO05D005630 8.0e-43 178.7 250 39.2
Dinv00597 Davidia involucrata HOM05D004846 ORTHO05D005630 6.8e-42 175.6 177 52.0
Hma1.2p1_0279F.1_g112210 Hydrangea macrophylla HOM05D004846 ORTHO05D005630 5.4e-39 166.0 175 50.3
Nn7g36110 Nelumbo nucifera HOM05D004846 ORTHO05D005630 3.6e-35 153.3 145 53.1
unitig_748.g6967 Utricularia gibba HOM05D004846 ORTHO05D005630 2.7e-30 137.1 365 33.2
C07p36330 Brassica napus HOM05D004846 ORTHO05D017504 5.2e-26 122.9 234 33.8
BolC7t44149H Brassica oleracea HOM05D004846 ORTHO05D017504 6.8e-26 122.5 234 33.8
CDE02G2253 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 8.9e-26 122.1 232 34.1
BcaC06g33836 Brassica carinata HOM05D004846 ORTHO05D017504 1.2e-25 121.7 234 32.5
unitig_1.g29345 Utricularia gibba HOM05D004846 ORTHO05D005630 3.9e-21 106.7 163 43.6
unitig_747.g22069 Utricularia gibba HOM05D004846 ORTHO05D005630 3.9e-21 106.7 163 43.6
Dinv00598 Davidia involucrata HOM05D004846 ORTHO05D005630 4.9e-16 89.7 82 54.9
Eucgr.J00244 Eucalyptus grandis HOM05D004846 ORTHO05D005630 1.9e-15 87.8 133 41.4
Psat3g169160 Pisum sativum HOM05D004846 ORTHO05D005630 3.3e-12 77.0 98 41.8
Ca_14625_v3 Cicer arietinum L. HOM05D004846 ORTHO05D005630 9.9e-09 65.5 76 44.7


User provided reference genes

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