Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 2.1e-36 155.2 80 100.0
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 4.1e-24 114.4 78 70.5
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 4.1e-24 114.4 78 70.5
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 5.3e-24 114.0 78 73.1
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 9.1e-24 113.2 78 70.5
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 9.1e-24 113.2 78 70.5
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 2.0e-23 112.1 79 68.4
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 2.0e-23 112.1 78 70.5
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.6e-23 111.7 78 67.9
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.6e-23 111.7 78 67.9
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 3.4e-23 111.3 78 71.8
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 4.5e-23 110.9 78 71.8
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 5.9e-23 110.5 78 69.2
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.9e-23 110.5 78 70.5
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 7.7e-23 110.2 78 66.7
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 7.7e-23 110.2 78 70.5
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 7.7e-23 110.2 77 67.5
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 1.0e-22 109.8 78 69.2
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.7e-22 109.0 78 70.5
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 1.7e-22 109.0 77 70.1
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.7e-22 109.0 78 69.2
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 2.2e-22 108.6 78 67.9
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 2.2e-22 108.6 78 67.9
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.2e-22 108.6 78 67.9
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 2.2e-22 108.6 78 66.7
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.9e-22 108.2 78 69.2
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 2.9e-22 108.2 78 67.9
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 3.8e-22 107.8 78 65.4
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 5.0e-22 107.5 77 70.1
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 6.5e-22 107.1 78 65.4
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 8.5e-22 106.7 78 66.7
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 1.1e-21 106.3 78 66.7
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.1e-21 106.3 77 68.8
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 1.4e-21 105.9 78 65.4
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 1.4e-21 105.9 78 64.1
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 1.9e-21 105.5 78 65.4
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.9e-21 105.5 77 66.2
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 1.9e-21 105.5 77 66.2
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 1.9e-21 105.5 78 64.1
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.9e-21 105.5 78 65.4
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 2.5e-21 105.1 78 66.7
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 3.2e-21 104.8 78 66.7
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 4.2e-21 104.4 78 64.1
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 4.2e-21 104.4 77 66.2
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 7.2e-21 103.6 77 66.2
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 7.2e-21 103.6 77 66.2
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 7.2e-21 103.6 78 64.1
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 7.2e-21 103.6 78 64.1
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.2e-20 102.8 77 64.9
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 1.2e-20 102.8 91 59.3
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 1.2e-20 102.8 78 64.1
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 2.1e-20 102.1 78 64.1
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 4.7e-20 100.9 77 63.6
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 4.7e-20 100.9 77 64.9
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 4.7e-20 100.9 77 64.9
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 6.1e-20 100.5 77 63.6
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 3.0e-19 98.2 77 63.6
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 3.0e-19 98.2 77 63.6
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 3.0e-19 98.2 78 61.5
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 3.9e-19 97.8 77 62.3
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 5.1e-19 97.4 78 65.4
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 5.1e-19 97.4 77 63.6
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 6.7e-19 97.1 78 61.5
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 8.8e-19 96.7 77 61.0
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 8.8e-19 96.7 77 61.0
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 2.0e-18 95.5 78 57.7
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 2.6e-18 95.1 77 64.9
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 7.4e-18 93.6 75 60.0
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 7.4e-18 93.6 75 60.0
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 7.4e-18 93.6 75 58.7
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 7.4e-18 93.6 76 59.2
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 9.7e-18 93.2 77 59.7
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 1.7e-17 92.4 76 60.5
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 2.2e-17 92.0 75 60.0
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 2.8e-17 91.7 75 58.7
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 6.3e-17 90.5 75 57.3
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 8.2e-17 90.1 77 59.7
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 1.1e-16 89.7 75 57.3
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 1.1e-16 89.7 75 57.3
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 1.4e-16 89.4 75 56.0
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 1.4e-16 89.4 75 56.0
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 1.4e-16 89.4 75 56.0
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 1.8e-16 89.0 75 57.3
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 3.1e-16 88.2 78 61.5
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 9.1e-16 86.7 80 57.5
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 7.2e-13 77.0 77 54.5
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.7e-12 75.1 100 46.0
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 1.1e-10 69.7 52 69.2
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 1.1e-10 69.7 64 56.2
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 2.0e-07 58.9 46 58.7
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 5.9e-07 57.4 33 84.8
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 7.7e-07 57.0 33 84.8
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.3e-06 56.2 45 57.8
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 1.7e-06 55.8 33 84.8
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.9e-06 55.1 48 54.2


User provided reference genes

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