Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28223 Sequoiadendron giganteum HOM05D003868 ORTHO05D007426 6.1e-100 367.5 182 100.0
SEGI_37442 Sequoiadendron giganteum HOM05D006122 ORTHO05D007426 3.9e-14 82.4 49 79.6
SEGI_05698 Sequoiadendron giganteum HOM05D017626 ORTHO05D007426 2.8e-12 76.3 46 78.3
SEGI_33040 Sequoiadendron giganteum HOM05D000004 ORTHO05D011908 3.4e-10 69.3 47 68.1
SEGI_37683 Sequoiadendron giganteum HOM05D017626 ORTHO05D000002 9.9e-10 67.8 46 67.4
SEGI_41596 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.3e-09 67.4 47 61.7
SEGI_24522 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.2e-09 66.6 47 68.1
SEGI_08047 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.4e-08 63.9 47 63.8
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 1.4e-08 63.9 47 68.1
SEGI_37330 Sequoiadendron giganteum HOM05D000635 ORTHO05D000488 2.4e-08 63.2 47 61.7
SEGI_20098 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.2e-08 62.8 47 55.3
SEGI_31453 Sequoiadendron giganteum HOM05D007004 ORTHO05D000002 3.2e-08 62.8 47 59.6
SEGI_22302 Sequoiadendron giganteum HOM05D000349 ORTHO05D001782 9.3e-08 61.2 48 60.4
SEGI_14777 Sequoiadendron giganteum HOM05D000188 ORTHO05D000362 2.1e-07 60.1 47 63.8
SEGI_13619 Sequoiadendron giganteum HOM05D001323 ORTHO05D000002 2.7e-07 59.7 47 55.3
SEGI_22826 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.7e-07 59.7 47 59.6
SEGI_31778 Sequoiadendron giganteum HOM05D002295 ORTHO05D018402 3.5e-07 59.3 49 55.1
SEGI_38055 Sequoiadendron giganteum HOM05D000246 ORTHO05D002923 7.9e-07 58.2 54 51.9
SEGI_29632 Sequoiadendron giganteum HOM05D004538 ORTHO05D006068 1.3e-06 57.4 47 55.3
Rhsim05G0124800 Rhododendron simsii HOM05D003868 ORTHO05D005364 2.3e-06 56.6 28 78.6
SEGI_31853 Sequoiadendron giganteum HOM05D001398 ORTHO05D001467 2.3e-06 56.6 43 58.1
TAR633G1950 Trochodendron aralioides HOM05D003868 ORTHO05D005364 2.3e-06 56.6 92 35.9
Aqoxy5G02863 Aquilegia oxysepala HOM05D003868 ORTHO05D005364 3.0e-06 56.2 28 75.0
CDE09G0142 Ceratophyllum demersum HOM05D003868 ORTHO05D005364 3.0e-06 56.2 39 61.5
CDE09G0492 Ceratophyllum demersum HOM05D003868 ORTHO05D005364 3.0e-06 56.2 39 61.5
Nn4g25324 Nelumbo nucifera HOM05D003868 ORTHO05D005364 3.0e-06 56.2 28 75.0
SEGI_26804 Sequoiadendron giganteum HOM05D000015 ORTHO05D000002 3.0e-06 56.2 44 59.1
CSS0017748 Camellia sinensis var. sinensis HOM05D003868 ORTHO05D005364 5.1e-06 55.5 28 75.0
Dinv30957 Davidia involucrata HOM05D003868 ORTHO05D005364 5.1e-06 55.5 28 75.0
HanXRQChr04g0116761 Helianthus annuus HOM05D003868 ORTHO05D005364 5.1e-06 55.5 28 75.0
Lsat_1_v5_gn_7_23500 Lactuca sativa HOM05D003868 ORTHO05D005364 5.1e-06 55.5 28 75.0
vmacro19799 Vaccinium macrocarpon HOM05D003868 ORTHO05D005364 5.1e-06 55.5 28 75.0
SalBow4G0333 Salvia bowleyana HOM05D003868 ORTHO05D005364 6.7e-06 55.1 94 35.1
Atru.chr9.43 Acer truncatum HOM05D003868 ORTHO05D005364 8.7e-06 54.7 41 58.5
SalBow1G5269 Salvia bowleyana HOM05D003868 ORTHO05D005364 8.7e-06 54.7 28 75.0
SalBow1G5332 Salvia bowleyana HOM05D003868 ORTHO05D005364 8.7e-06 54.7 28 75.0
SEGI_01990 Sequoiadendron giganteum HOM05D005176 ORTHO05D006482 8.7e-06 54.7 44 52.3
SEGI_26700 Sequoiadendron giganteum HOM05D000422 ORTHO05D000002 8.7e-06 54.7 49 49.0
SEGI_28537 Sequoiadendron giganteum HOM05D015854 ORTHO05D000002 8.7e-06 54.7 44 56.8
HPP92_017212 Vanilla planifolia HOM05D003868 ORTHO05D005364 8.7e-06 54.7 28 75.0


User provided reference genes

Program Settings