Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 3.7e-64 248.1 125 100.0
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 5.8e-17 91.3 65 69.2
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 1.7e-16 89.7 71 66.2
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 3.7e-16 88.6 73 64.4
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 4.9e-16 88.2 65 67.7
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 6.4e-16 87.8 71 63.4
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 1.4e-15 86.7 69 60.9
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 1.9e-15 86.3 63 66.7
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 1.9e-15 86.3 70 64.3
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 2.4e-15 85.9 60 70.0
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 2.4e-15 85.9 60 70.0
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 2.4e-15 85.9 60 70.0
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 2.4e-15 85.9 60 66.7
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 3.2e-15 85.5 61 70.5
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 3.2e-15 85.5 61 70.5
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 5.4e-15 84.7 87 56.3
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 5.4e-15 84.7 71 64.8
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 9.2e-15 84.0 76 60.5
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 9.2e-15 84.0 61 68.9
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 1.2e-14 83.6 60 68.3
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 1.6e-14 83.2 71 60.6
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 1.6e-14 83.2 71 60.6
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 2.1e-14 82.8 81 59.3
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 2.7e-14 82.4 65 61.5
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 2.7e-14 82.4 60 68.3
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 2.7e-14 82.4 60 66.7
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 4.6e-14 81.6 60 66.7
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 4.6e-14 81.6 65 67.7
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 7.8e-14 80.9 60 66.7
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 1.0e-13 80.5 60 65.0
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 1.3e-13 80.1 60 68.3
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 1.3e-13 80.1 59 64.4
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 1.3e-13 80.1 61 67.2
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 1.1e-12 77.0 72 56.9
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 4.3e-12 75.1 61 62.3
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 2.1e-11 72.8 61 60.7
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 4.7e-11 71.6 69 53.6
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 6.2e-11 71.2 70 48.6
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 1.8e-10 69.7 68 52.9
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 1.6e-06 56.6 43 65.1
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 2.7e-06 55.8 64 50.0


User provided reference genes

Program Settings