Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28026 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 9.3e-75 283.5 147 100.0
SEGI_06029 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 1.8e-25 119.8 83 78.3
SEGI_32877 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 4.0e-25 118.6 83 77.1
SEGI_11513 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 2.2e-23 112.8 74 81.1
SEGI_38062 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 3.7e-23 112.1 83 74.7
SEGI_01194 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 1.6e-18 96.7 68 77.9
SEGI_34770 Sequoiadendron giganteum HOM05D001049 ORTHO05D001986 2.1e-18 96.3 48 91.7
TAR628G0282 Trochodendron aralioides HOM05D001049 ORTHO05D001986 1.6e-10 70.1 50 62.0
Nn1g05589 Nelumbo nucifera HOM05D001049 ORTHO05D001986 6.1e-10 68.2 48 62.5
Cfa013801 Carpinus fangiana HOM05D001049 ORTHO05D001986 8.0e-10 67.8 48 62.5
PGR042G3763 Punica granatum HOM05D001049 ORTHO05D001986 8.0e-10 67.8 50 64.0
Atru.chr13.1005 Acer truncatum HOM05D001049 ORTHO05D001986 2.3e-09 66.2 50 60.0
Duzib093G0120 Durio zibethinus HOM05D001049 ORTHO05D001986 2.3e-09 66.2 48 62.5
Nn5g29871 Nelumbo nucifera HOM05D001049 ORTHO05D001986 2.3e-09 66.2 50 60.0
Solyc04g076380.4 Solanum lycopersicum HOM05D001049 ORTHO05D001986 2.3e-09 66.2 46 63.0
Sopen04g030140 Solanum pennellii HOM05D001049 ORTHO05D001986 2.3e-09 66.2 46 63.0
PGSC0003DMG400009340 Solanum tuberosum HOM05D001049 ORTHO05D001986 2.3e-09 66.2 46 63.0
CSS0024879 Camellia sinensis var. sinensis HOM05D001049 ORTHO05D001986 3.1e-09 65.9 46 65.2
Haze_22464 Corylus avellana HOM05D001049 ORTHO05D001986 3.1e-09 65.9 48 60.4
Glyma.02G214700 Glycine max HOM05D001049 ORTHO05D001986 3.1e-09 65.9 54 59.3
Gohir.D05G221900 Gossypium hirsutum HOM05D001049 ORTHO05D001986 3.1e-09 65.9 48 60.4
Gorai.009G229300 Gossypium raimondii HOM05D001049 ORTHO05D001986 3.1e-09 65.9 48 60.4
Phvul.008G182200 Phaseolus vulgaris HOM05D001049 ORTHO05D001986 4.0e-09 65.5 47 66.0
Aqoxy6G00858 Aquilegia oxysepala HOM05D001049 ORTHO05D001986 5.2e-09 65.1 48 60.4
Gohir.A05G219300 Gossypium hirsutum HOM05D001049 ORTHO05D001986 5.2e-09 65.1 48 60.4
Hund17286 Selenicereus undatus HOM05D001049 ORTHO05D001986 5.2e-09 65.1 48 62.5
Dinv44863 Davidia involucrata HOM05D001049 ORTHO05D001986 6.8e-09 64.7 50 60.0
Duzib041G0510 Durio zibethinus HOM05D001049 ORTHO05D001986 8.9e-09 64.3 48 58.3
Manes.18G058200 Manihot esculenta HOM05D001049 ORTHO05D001986 8.9e-09 64.3 46 63.0
QL09p017878 Quercus lobata HOM05D001049 ORTHO05D001986 1.2e-08 63.9 50 56.0
Glyma.14G182100 Glycine max HOM05D001049 ORTHO05D001986 1.5e-08 63.5 55 56.4
Nitab4.5_0004944g0040 Nicotiana tabacum HOM05D001049 ORTHO05D001986 1.5e-08 63.5 42 66.7
Nitab4.5_0005913g0030 Nicotiana tabacum HOM05D001049 ORTHO05D001986 1.5e-08 63.5 42 66.7
Oeu012755.1 Olea europaea HOM05D001049 ORTHO05D001986 1.5e-08 63.5 50 54.0
TAR381G0764 Trochodendron aralioides HOM05D001049 ORTHO05D001986 1.5e-08 63.5 50 56.0
COL.COLO4_35252 Corchorus olitorius HOM05D001049 ORTHO05D001986 2.0e-08 63.2 48 62.5
Thecc.08G071500 Theobroma cacao HOM05D001049 ORTHO05D001986 2.0e-08 63.2 48 62.5
Prupe.1G532800 Prunus persica HOM05D001049 ORTHO05D001986 2.6e-08 62.8 47 63.8
vmacro04647 Vaccinium macrocarpon HOM05D001049 ORTHO05D001986 2.6e-08 62.8 50 54.0
CANSAT25G1018 Cannabis sativa HOM05D001049 ORTHO05D001986 3.4e-08 62.4 50 52.0
Ciclev10000469m.g Citrus clementina HOM05D001049 ORTHO05D001986 3.4e-08 62.4 48 62.5
Peaxi162Scf00454g00327 Petunia axillaris HOM05D001049 ORTHO05D001986 3.4e-08 62.4 42 64.3
Psat5g046800 Pisum sativum HOM05D001049 ORTHO05D001986 3.4e-08 62.4 50 60.0
Gohir.D01G113900 Gossypium hirsutum HOM05D001049 ORTHO05D001986 4.4e-08 62.0 48 56.2
Gorai.002G138900 Gossypium raimondii HOM05D001049 ORTHO05D001986 4.4e-08 62.0 48 56.2
Manes.18G058100 Manihot esculenta HOM05D001049 ORTHO05D001986 4.4e-08 62.0 53 56.6
Rhsim07G0212200 Rhododendron simsii HOM05D001049 ORTHO05D001986 4.4e-08 62.0 50 58.0
CAN.G475.20 Capsicum annuum HOM05D001049 ORTHO05D001986 5.8e-08 61.6 46 58.7
Cc10_g15930 Coffea canephora HOM05D001049 ORTHO05D001986 5.8e-08 61.6 50 54.0
Ah.05g171320 Amaranthus hybridus HOM05D001049 ORTHO05D001986 7.5e-08 61.2 48 58.3
Hma1.2p1_0125F.1_g058820 Hydrangea macrophylla HOM05D001049 ORTHO05D001986 7.5e-08 61.2 46 58.7
Nitab4.5_0000131g0220 Nicotiana tabacum HOM05D001049 ORTHO05D001986 7.5e-08 61.2 48 60.4
Os04g0653400 Oryza sativa ssp. japonica HOM05D001049 ORTHO05D001986 7.5e-08 61.2 49 61.2
ATR0580G449 Amborella trichopoda HOM05D001049 ORTHO05D001986 9.8e-08 60.8 48 54.2
Dinv42608 Davidia involucrata HOM05D001049 ORTHO05D001986 9.8e-08 60.8 50 54.0
MBI16_g39836_MAGBIO Magnolia biondii HOM05D001049 ORTHO05D001986 1.3e-07 60.5 50 56.0
Ca_23435_v3 Cicer arietinum L. HOM05D001049 ORTHO05D001986 1.7e-07 60.1 50 54.0
Medtr3g100160 Medicago truncatula HOM05D001049 ORTHO05D001986 1.7e-07 60.1 50 56.0
Hund26816 Selenicereus undatus HOM05D001049 ORTHO05D001986 1.7e-07 60.1 50 56.0
arahy.Tifrunner.gnm1.ann1.BQAG9X Arachis hypogaea HOM05D001049 ORTHO05D001986 2.2e-07 59.7 42 61.9
arahy.Tifrunner.gnm1.ann1.Q0I0E2 Arachis hypogaea HOM05D001049 ORTHO05D001986 2.2e-07 59.7 42 61.9
Gohir.A01G126300 Gossypium hirsutum HOM05D001049 ORTHO05D001986 2.2e-07 59.7 48 54.2
Sc15g0002720 Simmondsia chinensis HOM05D001049 ORTHO05D001986 2.2e-07 59.7 45 57.8
Nn2g12771 Nelumbo nucifera HOM05D001049 ORTHO05D001986 2.9e-07 59.3 51 52.9
TWI63G1242 Tripterygium wilfordii HOM05D001049 ORTHO05D001986 2.9e-07 59.3 51 52.9
Glyma.02G160251 Glycine max HOM05D001049 ORTHO05D015291 3.7e-07 58.9 50 54.0
Lj4C717G5 Lonicera japonica HOM05D001049 ORTHO05D001986 3.7e-07 58.9 46 56.5
Lj4C738G5 Lonicera japonica HOM05D001049 ORTHO05D001986 3.7e-07 58.9 46 56.5
Lalb_Chr11g0064941 Lupinus albus HOM05D001049 ORTHO05D001986 3.7e-07 58.9 42 59.5
Cfa013502 Carpinus fangiana HOM05D001049 ORTHO05D001986 4.9e-07 58.5 39 66.7
Lj1g0009282 Lotus japonicus HOM05D001049 ORTHO05D001986 4.9e-07 58.5 50 50.0
MD08G1199100 Malus domestica HOM05D001049 ORTHO05D001986 4.9e-07 58.5 48 56.2
TPR.G6360 Trifolium pratense HOM05D001049 ORTHO05D001986 4.9e-07 58.5 50 56.0
AagrBONN_evm.TU.Sc2ySwM_368.2742 Anthoceros agrestis HOM05D004589 ORTHO05D005848 6.4e-07 58.2 48 54.2
Haze_22094 Corylus avellana HOM05D001049 ORTHO05D001986 6.4e-07 58.2 39 66.7
Duzib168G0135 Durio zibethinus HOM05D001049 ORTHO05D001986 6.4e-07 58.2 51 52.9
Lalb_Chr08g0242561 Lupinus albus HOM05D001049 ORTHO05D001986 6.4e-07 58.2 50 52.0
MD15G1386100 Malus domestica HOM05D001049 ORTHO05D001986 6.4e-07 58.2 51 52.9
CiPaw.08G036100 Carya illinoinensis HOM05D001049 ORTHO05D001986 8.3e-07 57.8 51 58.8
CiPaw.08G055900 Carya illinoinensis HOM05D001049 ORTHO05D001986 8.3e-07 57.8 48 52.1
Potri.005G153800 Populus trichocarpa HOM05D001049 ORTHO05D001986 8.3e-07 57.8 48 54.2
Zm00001eb067960 Zea mays HOM05D001049 ORTHO05D001986 8.3e-07 57.8 40 62.5
Zm00001eb432420 Zea mays HOM05D001049 ORTHO05D001986 8.3e-07 57.8 50 52.0
Migut.N02860 Erythranthe guttata HOM05D001049 ORTHO05D001986 1.1e-06 57.4 50 52.0
Cpa.g.sc21.27 Carica papaya HOM05D001049 ORTHO05D001986 1.4e-06 57.0 47 55.3
Manes.14G154000 Manihot esculenta HOM05D001049 ORTHO05D001986 1.4e-06 57.0 51 51.0
PGR044G1953 Punica granatum HOM05D001049 ORTHO05D001986 1.4e-06 57.0 51 52.9
TAR383G0189 Trochodendron aralioides HOM05D001049 ORTHO05D001986 1.4e-06 57.0 51 49.0
Atru.chr7.616 Acer truncatum HOM05D001049 ORTHO05D001986 1.9e-06 56.6 51 54.9
CAN.G1165.2 Capsicum annuum HOM05D001049 ORTHO05D001986 1.9e-06 56.6 49 53.1
Duzib150G1377 Durio zibethinus HOM05D001049 ORTHO05D001986 1.9e-06 56.6 38 65.8
Eucgr.C02330 Eucalyptus grandis HOM05D001049 ORTHO05D001986 1.9e-06 56.6 34 70.6
PSO541G5110 Papaver somniferum HOM05D001049 ORTHO05D001986 1.9e-06 56.6 50 48.0
Potri.002G106632 Populus trichocarpa HOM05D001049 ORTHO05D001986 1.9e-06 56.6 48 52.1
TAR625G0662 Trochodendron aralioides HOM05D001049 ORTHO05D001986 1.9e-06 56.6 50 52.0
MSTRG.24430 Avicennia marina HOM05D001049 ORTHO05D001986 2.4e-06 56.2 48 47.9
AUR62014350 Chenopodium quinoa HOM05D001049 ORTHO05D001986 2.4e-06 56.2 48 52.1
AUR62019093 Chenopodium quinoa HOM05D001049 ORTHO05D001986 2.4e-06 56.2 48 52.1
MELO3C004023.2 Cucumis melo HOM05D001049 ORTHO05D001986 2.4e-06 56.2 39 59.0
CsaV3_2G008410 Cucumis sativus L. HOM05D001049 ORTHO05D001986 2.4e-06 56.2 39 59.0
Glyma.06G097200 Glycine max HOM05D001049 ORTHO05D001986 2.4e-06 56.2 40 65.0
Gorai.004G119600 Gossypium raimondii HOM05D001049 ORTHO05D014716 2.4e-06 56.2 38 65.8
Lalb_Chr04g0252811 Lupinus albus HOM05D001049 ORTHO05D001986 2.4e-06 56.2 55 49.1
Lalb_Chr07g0180491 Lupinus albus HOM05D001049 ORTHO05D001986 2.4e-06 56.2 46 58.7
Phvul.009G036200 Phaseolus vulgaris HOM05D001049 ORTHO05D001986 2.4e-06 56.2 42 61.9
SalBow6G4447 Salvia bowleyana HOM05D001049 ORTHO05D001986 2.4e-06 56.2 51 51.0
Thecc.09G177300 Theobroma cacao HOM05D001049 ORTHO05D001986 2.4e-06 56.2 46 56.5
GSVIVG01009185001 Vitis vinifera HOM05D001049 ORTHO05D001986 2.4e-06 56.2 50 52.0
Gohir.A05G360900 Gossypium hirsutum HOM05D001049 ORTHO05D014716 3.2e-06 55.8 38 63.2
Gohir.A08G023216 Gossypium hirsutum HOM05D001049 ORTHO05D001986 3.2e-06 55.8 38 63.2
Gohir.A08G023416 Gossypium hirsutum HOM05D001049 ORTHO05D014716 3.2e-06 55.8 38 63.2
Gohir.D04G100432 Gossypium hirsutum HOM05D001049 ORTHO05D014716 3.2e-06 55.8 38 63.2
Gohir.D08G034000 Gossypium hirsutum HOM05D001049 ORTHO05D001986 3.2e-06 55.8 38 63.2
Gorai.004G031600 Gossypium raimondii HOM05D001049 ORTHO05D001986 3.2e-06 55.8 38 63.2
QL02p097801 Quercus lobata HOM05D001049 ORTHO05D001986 3.2e-06 55.8 42 59.5
ClCG06G013360 Citrullus lanatus HOM05D001049 ORTHO05D001986 4.1e-06 55.5 46 58.7
ClCG11G012150 Citrullus lanatus HOM05D001049 ORTHO05D001986 4.1e-06 55.5 39 59.0
Ciclev10007535m.g Citrus clementina HOM05D001049 ORTHO05D001986 4.1e-06 55.5 39 61.5
COL.COLO4_37704 Corchorus olitorius HOM05D001049 ORTHO05D001986 4.1e-06 55.5 51 52.9
SMO165G0009 Selaginella moellendorffii HOM05D001049 ORTHO05D001986 4.1e-06 55.5 46 58.7
MELO3C017461.2 Cucumis melo HOM05D001049 ORTHO05D001986 5.4e-06 55.1 38 65.8
CsaV3_1G031610 Cucumis sativus L. HOM05D001049 ORTHO05D001986 5.4e-06 55.1 38 65.8
Hma1.2p1_1025F.1_g249330 Hydrangea macrophylla HOM05D001049 ORTHO05D001986 5.4e-06 55.1 38 71.1
Nn8g40480 Nelumbo nucifera HOM05D001049 ORTHO05D001986 5.4e-06 55.1 38 65.8
Sabra02G0083900 Salix brachista HOM05D001049 ORTHO05D001986 5.4e-06 55.1 48 52.1
Sed0013601 Sechium edule HOM05D001049 ORTHO05D001986 5.4e-06 55.1 39 61.5
Ah.14g083860 Amaranthus hybridus HOM05D001049 ORTHO05D001986 7.0e-06 54.7 46 56.5
CiPaw.07G192400 Carya illinoinensis HOM05D001049 ORTHO05D001986 7.0e-06 54.7 46 54.3
Glyma.04G095500 Glycine max HOM05D001049 ORTHO05D001986 7.0e-06 54.7 42 59.5
Gohir.D08G111608 Gossypium hirsutum HOM05D001049 ORTHO05D014716 7.0e-06 54.7 38 60.5
Eucgr.C00154 Eucalyptus grandis HOM05D001049 ORTHO05D001986 9.2e-06 54.3 38 63.2
Gohir.A05G004900 Gossypium hirsutum HOM05D001049 ORTHO05D001986 9.2e-06 54.3 51 52.9
Gohir.D05G005800 Gossypium hirsutum HOM05D001049 ORTHO05D001986 9.2e-06 54.3 51 52.9
Gohir.D10G139266 Gossypium hirsutum HOM05D001049 ORTHO05D014716 9.2e-06 54.3 38 60.5
Gorai.009G005600 Gossypium raimondii HOM05D001049 ORTHO05D001986 9.2e-06 54.3 51 52.9
HanXRQChr05g0142991 Helianthus annuus HOM05D001049 ORTHO05D001986 9.2e-06 54.3 45 60.0
RcHm_v2.0_Chr7g0235511 Rosa chinensis HOM05D001049 ORTHO05D001986 9.2e-06 54.3 48 54.2


User provided reference genes

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