Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 3.1e-61 238.4 131 100.0
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 3.3e-31 138.7 126 62.7
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 6.2e-30 134.4 130 60.0
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 6.2e-30 134.4 116 62.9
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 6.2e-30 134.4 116 62.9
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.4e-29 133.3 120 60.8
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 1.4e-29 133.3 120 60.8
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 2.4e-29 132.5 120 60.8
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 5.3e-29 131.3 123 60.2
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 9.0e-29 130.6 129 55.8
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 9.0e-29 130.6 122 60.7
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 1.2e-28 130.2 115 65.2
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 1.5e-28 129.8 116 62.1
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 2.0e-28 129.4 117 62.4
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 2.6e-28 129.0 124 59.7
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 5.8e-28 127.9 116 60.3
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 9.9e-28 127.1 110 61.8
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 1.3e-27 126.7 111 63.1
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 1.3e-27 126.7 118 61.0
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 1.3e-27 126.7 118 61.0
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 1.3e-27 126.7 109 63.3
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 1.3e-27 126.7 116 60.3
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 1.7e-27 126.3 129 52.7
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 2.2e-27 125.9 119 58.8
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 2.2e-27 125.9 118 59.3
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 2.2e-27 125.9 109 63.3
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 2.2e-27 125.9 109 64.2
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 2.9e-27 125.6 110 60.9
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 2.9e-27 125.6 109 63.3
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 2.9e-27 125.6 110 60.9
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.9e-27 124.8 110 61.8
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 4.9e-27 124.8 123 56.9
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 6.4e-27 124.4 111 61.3
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 6.4e-27 124.4 122 56.6
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 6.4e-27 124.4 122 56.6
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 8.4e-27 124.0 112 58.9
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 8.4e-27 124.0 114 61.4
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 1.1e-26 123.6 113 61.1
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 1.1e-26 123.6 112 58.9
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 1.4e-26 123.2 123 61.0
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 1.9e-26 122.9 116 58.6
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 1.9e-26 122.9 102 65.7
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 1.9e-26 122.9 116 59.5
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 4.2e-26 121.7 105 62.9
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 5.5e-26 121.3 111 61.3
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 5.5e-26 121.3 112 59.8
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 7.1e-26 120.9 121 56.2
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 7.1e-26 120.9 116 56.9
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 1.2e-25 120.2 111 61.3
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 1.2e-25 120.2 111 61.3
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 1.6e-25 119.8 128 54.7
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 1.6e-25 119.8 103 61.2
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.6e-25 119.8 109 60.6
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 2.1e-25 119.4 107 60.7
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 2.1e-25 119.4 106 60.4
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 2.7e-25 119.0 119 57.1
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 2.7e-25 119.0 103 63.1
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 3.5e-25 118.6 111 60.4
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 3.5e-25 118.6 108 59.3
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 4.6e-25 118.2 97 66.0
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 6.0e-25 117.9 115 56.5
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 6.0e-25 117.9 107 60.7
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 7.9e-25 117.5 115 56.5
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 1.0e-24 117.1 111 59.5
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.3e-24 116.7 109 57.8
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.3e-24 116.7 109 57.8
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 1.8e-24 116.3 107 59.8
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 1.8e-24 116.3 107 59.8
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 2.3e-24 115.9 99 63.6
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 2.3e-24 115.9 105 62.9
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 3.0e-24 115.5 111 57.7
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 3.9e-24 115.2 107 58.9
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 3.9e-24 115.2 107 58.9
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 3.9e-24 115.2 107 58.9
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 3.9e-24 115.2 95 66.3
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 3.9e-24 115.2 95 66.3
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 3.9e-24 115.2 116 55.2
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 6.7e-24 114.4 97 62.9
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 6.7e-24 114.4 109 56.9
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.5e-23 113.2 123 52.8
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 1.9e-23 112.8 112 56.2
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.9e-23 112.8 114 53.5
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.9e-23 112.8 114 53.5
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 3.3e-23 112.1 97 63.9
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 5.6e-23 111.3 109 56.0
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 5.6e-23 111.3 114 51.8
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 7.4e-23 110.9 120 51.7
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 1.6e-22 109.8 101 58.4
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 2.1e-22 109.4 113 55.8
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 4.8e-22 108.2 105 58.1
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 2.4e-21 105.9 115 49.6
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 1.2e-20 103.6 119 52.9
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 1.3e-19 100.1 110 50.9
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 3.8e-19 98.6 122 50.0
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 3.2e-18 95.5 122 48.4
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 4.2e-18 95.1 104 51.9
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.2e-17 93.6 105 50.5
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 2.5e-15 85.9 108 46.3
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 1.6e-14 83.2 105 46.7
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 4.8e-14 81.6 87 55.2
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.1e-13 80.5 100 49.0
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 3.1e-13 79.0 66 60.6
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 4.1e-13 78.6 114 40.4
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 7.6e-12 74.3 72 56.9
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.7e-11 73.2 97 46.4
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 2.2e-11 72.8 107 46.7


User provided reference genes

Program Settings